RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 SMAD5-AS1Q9Y6J3 95 aa8.6□□□□□ -1.03
LDLRAD3-201ENST00000315571 LY6G6DO95868 133 aa8.6□□□□□ -1.03
LDLRAD3-201ENST00000315571 MRPL55Q7Z7F7 128 aaKnown RBP8.6□□□□□ -1.03
LDLRAD3-201ENST00000315571 AMELXQ99217 191 aa8.6□□□□□ -1.03
LDLRAD3-201ENST00000315571 IGHV1OR15-1A0A075B7D0 117 aa8.59□□□□□ -1.03
LDLRAD3-201ENST00000315571 C15orf32Q32M92 178 aa8.59□□□□□ -1.03
LDLRAD3-201ENST00000315571 LINC00482Q8N8I6 264 aa8.59□□□□□ -1.03
LDLRAD3-201ENST00000315571 UPK3BQ9BT76 320 aa8.59□□□□□ -1.03
LDLRAD3-201ENST00000315571 SETXQ7Z333 2677 aaKnown RBP8.59□□□□□ -1.03
LDLRAD3-201ENST00000315571 LECT2O14960 151 aa8.59□□□□□ -1.03
LDLRAD3-201ENST00000315571 DEFB112Q30KQ8 113 aa8.59□□□□□ -1.03
LDLRAD3-201ENST00000315571 F6UB75 175 aa8.59□□□□□ -1.04
LDLRAD3-201ENST00000315571 FSHBP01225 129 aa8.59□□□□□ -1.04
LDLRAD3-201ENST00000315571 SLPIP03973 132 aa8.59□□□□□ -1.04
LDLRAD3-201ENST00000315571 RMI2Q96E14 147 aa8.59□□□□□ -1.04
LDLRAD3-201ENST00000315571 DAD1P61803 113 aa8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 TRBV7-6A0A0J9YX20 115 aa8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 RPL36AP83881 106 aaKnown RBP8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 RPL36ALQ969Q0 106 aaKnown RBP8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 VSIG2Q96IQ7 327 aa8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 KLK9Q9UKQ9 250 aa8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 H3BUX3 64 aa8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 RNF5Q99942 180 aa8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 TEX15Q9BXT5 2789 aa8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 SONP18583 2426 aaKnown RBP8.58□□□□□ -1.04
LDLRAD3-201ENST00000315571 LY6EQ16553 131 aa8.57□□□□□ -1.04
LDLRAD3-201ENST00000315571 IGKV3OR2-268A0A0C4DH90 116 aa8.57□□□□□ -1.04
LDLRAD3-201ENST00000315571 OTOGQ6ZRI0 2925 aa8.57□□□□□ -1.04
LDLRAD3-201ENST00000315571 TRBV27A0A0K0K1C4 114 aa8.57□□□□□ -1.04
LDLRAD3-201ENST00000315571 LINC00308Q8TCZ7 52 aa8.57□□□□□ -1.04
LDLRAD3-201ENST00000315571 HIVEP2P31629 2446 aa8.56□□□□□ -1.04
LDLRAD3-201ENST00000315571 CYSRT1A8MQ03 144 aa8.56□□□□□ -1.04
LDLRAD3-201ENST00000315571 CTSGP08311 255 aa8.56□□□□□ -1.04
LDLRAD3-201ENST00000315571 RPL28P46779 137 aaKnown RBP8.56□□□□□ -1.04
LDLRAD3-201ENST00000315571 LINC00158P58513 81 aa8.56□□□□□ -1.04
LDLRAD3-201ENST00000315571 PRR9Q5T870 116 aa8.56□□□□□ -1.04
LDLRAD3-201ENST00000315571 COX8CQ7Z4L0 72 aa8.56□□□□□ -1.04
LDLRAD3-201ENST00000315571 C20orf203Q8NBC4 194 aa8.56□□□□□ -1.04
LDLRAD3-201ENST00000315571 IGLV4-3A0A075B6K6 122 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 PAX4O43316 350 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 PRB2P02812 416 aaPredicted RBP8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 GPHB5Q86YW7 130 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 Q8N2B8 174 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 AKAP9Q99996 3911 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 LRCOL1A6NCL2 159 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 BUB3O43684 328 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 IGHV4-59P01825 116 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 OVOL2Q9BRP0 275 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 POLR2KP53803 58 aaKnown RBP8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 PIK3CD-AS1Q5SR53 167 aa8.55□□□□□ -1.04
LDLRAD3-201ENST00000315571 A0A0J9YX75 114 aa8.54□□□□□ -1.04
LDLRAD3-201ENST00000315571 C19orf54Q5BKX5 351 aa8.54□□□□□ -1.04
LDLRAD3-201ENST00000315571 UBE2D4Q9Y2X8 147 aa8.54□□□□□ -1.04
LDLRAD3-201ENST00000315571 IGHV4-4A0A075B6R2 117 aa8.53□□□□□ -1.04
LDLRAD3-201ENST00000315571 Q8N6K4 173 aa8.53□□□□□ -1.04
LDLRAD3-201ENST00000315571 NPBQ8NG41 125 aa8.53□□□□□ -1.04
LDLRAD3-201ENST00000315571 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.53□□□□□ -1.04
LDLRAD3-201ENST00000315571 IGKV2-29A2NJV5 120 aaPredicted RBP8.53□□□□□ -1.04
LDLRAD3-201ENST00000315571 HIST2H2BDQ6DRA6 164 aa8.53□□□□□ -1.04
LDLRAD3-201ENST00000315571 Q6YL49 198 aa8.53□□□□□ -1.04
LDLRAD3-201ENST00000315571 CCKP06307 115 aa8.53□□□□□ -1.04
LDLRAD3-201ENST00000315571 TRAV13-2A0A0B4J235 113 aa8.52□□□□□ -1.04
LDLRAD3-201ENST00000315571 IGHV3-38A0A0C4DH36 116 aa8.52□□□□□ -1.04
LDLRAD3-201ENST00000315571 INAFM1C9JVW0 142 aa8.52□□□□□ -1.04
LDLRAD3-201ENST00000315571 A6NDX4 124 aa8.52□□□□□ -1.05
LDLRAD3-201ENST00000315571 BLCAPP62952 87 aa8.52□□□□□ -1.05
LDLRAD3-201ENST00000315571 FAM218AQ96MZ4 157 aa8.52□□□□□ -1.05
LDLRAD3-201ENST00000315571 CDKN2A-AS1Q9UH64 79 aa8.52□□□□□ -1.05
LDLRAD3-201ENST00000315571 MRPS36P82909 103 aaKnown RBP8.51□□□□□ -1.05
LDLRAD3-201ENST00000315571 Q8N9W7 124 aa8.51□□□□□ -1.05
LDLRAD3-201ENST00000315571 ORMDL1Q9P0S3 153 aa8.51□□□□□ -1.05
LDLRAD3-201ENST00000315571 MTORP42345 2549 aa8.51□□□□□ -1.05
LDLRAD3-201ENST00000315571 C9orf47Q6ZRZ4 202 aa8.51□□□□□ -1.05
LDLRAD3-201ENST00000315571 HIVEP1P15822 2718 aa8.51□□□□□ -1.05
LDLRAD3-201ENST00000315571 CELSR1Q9NYQ6 3014 aa8.51□□□□□ -1.05
LDLRAD3-201ENST00000315571 A0A087WZ39 114 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 CLPSL1A2RUU4 121 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 C6orf226Q5I0X4 101 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 LINC01600Q96MT4 127 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 LAMTOR3Q9UHA4 124 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 F8P00451 2351 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 IGLV11-55A0A075B6I3 123 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 ZNF575Q86XF7 245 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 MRGPRG-AS1Q2M3A8 158 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 FAM222AQ5U5X8 452 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 C5orf56Q8N8D9 126 aa8.5□□□□□ -1.05
LDLRAD3-201ENST00000315571 TRAV7A0A075B6U4 112 aa8.49□□□□□ -1.05
LDLRAD3-201ENST00000315571 FP248Q71RG6 208 aaPredicted RBP8.49□□□□□ -1.05
LDLRAD3-201ENST00000315571 MIR7-3HGQ8N6C7 128 aa8.49□□□□□ -1.05
LDLRAD3-201ENST00000315571 LITAFQ99732 161 aa8.49□□□□□ -1.05
LDLRAD3-201ENST00000315571 SND1-IT1Q9HBX3 110 aa8.49□□□□□ -1.05
LDLRAD3-201ENST00000315571 ZNF469Q96JG9 3925 aaPredicted RBP8.49□□□□□ -1.05
LDLRAD3-201ENST00000315571 DNAJC9-AS1A6NH13 148 aa8.48□□□□□ -1.05
LDLRAD3-201ENST00000315571 H7BZZ5 65 aa8.48□□□□□ -1.05
LDLRAD3-201ENST00000315571 RNASE3P12724 160 aaKnown RBP8.48□□□□□ -1.05
LDLRAD3-201ENST00000315571 A0A087WYN8 130 aa8.48□□□□□ -1.05
LDLRAD3-201ENST00000315571 SVEP1Q4LDE5 3571 aa8.48□□□□□ -1.05
LDLRAD3-201ENST00000315571 IGHV4OR15-8A0A075B7B6 117 aa8.47□□□□□ -1.05
LDLRAD3-201ENST00000315571 A0A087WW49 117 aa8.47□□□□□ -1.05
LDLRAD3-201ENST00000315571 IGHV7-81A0A0B4J1V7 117 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms