RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 Q8N8P6 123 aa9.15□□□□□ -0.94
PPP1CA-201ENST00000312989 MAP1LC3AQ9H492 121 aa9.15□□□□□ -0.94
PPP1CA-201ENST00000312989 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
PPP1CA-201ENST00000312989 C2orf48Q96LS8 159 aa9.14□□□□□ -0.95
PPP1CA-201ENST00000312989 CTDSP1Q9GZU7 261 aa9.14□□□□□ -0.95
PPP1CA-201ENST00000312989 IFITM10A6NMD0 228 aa9.13□□□□□ -0.95
PPP1CA-201ENST00000312989 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.13□□□□□ -0.95
PPP1CA-201ENST00000312989 LINC00242Q5T6M2 205 aa9.13□□□□□ -0.95
PPP1CA-201ENST00000312989 ZC2HC1BQ5TFG8 222 aa9.13□□□□□ -0.95
PPP1CA-201ENST00000312989 COMMD7Q86VX2 200 aa9.13□□□□□ -0.95
PPP1CA-201ENST00000312989 STPG4Q8N801 248 aa9.13□□□□□ -0.95
PPP1CA-201ENST00000312989 IGIPA6NJ69 53 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 RAB5AP20339 215 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 MALP21145 153 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 IFI27P40305 119 aaPredicted RBP9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 PTTG1IPP53801 180 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 SPAG11BQ08648 103 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 J3QL48 77 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 OXTP01178 125 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 UBE2D1P51668 147 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 KIAA0087Q14695 138 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 C2orf66Q6UXQ4 117 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 OR10D4PQ8NGN7 298 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 AMELXQ99217 191 aa9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 CARHSP1Q9Y2V2 147 aaKnown RBP9.12□□□□□ -0.95
PPP1CA-201ENST00000312989 A0A087WZ39 114 aa9.11□□□□□ -0.95
PPP1CA-201ENST00000312989 MT1HL1P0DM35 61 aa9.11□□□□□ -0.95
PPP1CA-201ENST00000312989 KIAA1644Q3SXP7 199 aa9.11□□□□□ -0.95
PPP1CA-201ENST00000312989 C10orf25Q5T742 122 aa9.11□□□□□ -0.95
PPP1CA-201ENST00000312989 TMEM141Q96I45 108 aa9.11□□□□□ -0.95
PPP1CA-201ENST00000312989 CAMK2N2Q96S95 79 aa9.11□□□□□ -0.95
PPP1CA-201ENST00000312989 K7EMI3 77 aa9.1□□□□□ -0.95
PPP1CA-201ENST00000312989 APOMO95445 188 aa9.1□□□□□ -0.95
PPP1CA-201ENST00000312989 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
PPP1CA-201ENST00000312989 ORAOV1Q8WV07 137 aa9.1□□□□□ -0.95
PPP1CA-201ENST00000312989 DPH3Q96FX2 82 aa9.1□□□□□ -0.95
PPP1CA-201ENST00000312989 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
PPP1CA-201ENST00000312989 A0A0J9YXV3 536 aa9.09□□□□□ -0.95
PPP1CA-201ENST00000312989 A0A1W2PNN7 141 aa9.09□□□□□ -0.95
PPP1CA-201ENST00000312989 LINC01546A6NGU7 62 aa9.09□□□□□ -0.95
PPP1CA-201ENST00000312989 RNF151Q2KHN1 245 aa9.09□□□□□ -0.95
PPP1CA-201ENST00000312989 FAM19A3Q7Z5A8 133 aa9.09□□□□□ -0.95
PPP1CA-201ENST00000312989 NXT2Q9NPJ8 142 aaKnown RBP9.09□□□□□ -0.95
PPP1CA-201ENST00000312989 MRPL35Q9NZE8 188 aaKnown RBP9.09□□□□□ -0.95
PPP1CA-201ENST00000312989 LINC00474Q9P2X8 69 aa9.09□□□□□ -0.95
PPP1CA-201ENST00000312989 LOC107984640A0A0U1RRK4 108 aa9.08□□□□□ -0.96
PPP1CA-201ENST00000312989 NPSP0C0P6 89 aa9.08□□□□□ -0.96
PPP1CA-201ENST00000312989 ORMDL2Q53FV1 153 aa9.08□□□□□ -0.96
PPP1CA-201ENST00000312989 GNB1LQ9BYB4 327 aa9.08□□□□□ -0.96
PPP1CA-201ENST00000312989 TEX43Q6ZNM6 134 aa9.07□□□□□ -0.96
PPP1CA-201ENST00000312989 ALKBH7Q9BT30 221 aaPredicted RBP9.07□□□□□ -0.96
PPP1CA-201ENST00000312989 C6orf48Q9UBA6 75 aa9.07□□□□□ -0.96
PPP1CA-201ENST00000312989 PKIGQ9Y2B9 76 aa9.07□□□□□ -0.96
PPP1CA-201ENST00000312989 GAGE2BQ13066 116 aa9.06□□□□□ -0.96
PPP1CA-201ENST00000312989 UNQ6190/PRO20217Q6UXQ8 127 aa9.06□□□□□ -0.96
PPP1CA-201ENST00000312989 C7orf33Q8WU49 177 aa9.06□□□□□ -0.96
PPP1CA-201ENST00000312989 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
PPP1CA-201ENST00000312989 TGIF2-C20orf24A0A0A6YYL0 155 aa9.05□□□□□ -0.96
PPP1CA-201ENST00000312989 F8WDY8 70 aa9.05□□□□□ -0.96
PPP1CA-201ENST00000312989 TLX1NBP0CAT3 122 aa9.05□□□□□ -0.96
PPP1CA-201ENST00000312989 KRTAP7-1Q8IUC3 87 aa9.05□□□□□ -0.96
PPP1CA-201ENST00000312989 LINC01561Q8N1V8 128 aa9.05□□□□□ -0.96
PPP1CA-201ENST00000312989 TIMM17AQ99595 171 aa9.05□□□□□ -0.96
PPP1CA-201ENST00000312989 RHEBQ15382 184 aa9.04□□□□□ -0.96
PPP1CA-201ENST00000312989 Q6ZRP5 223 aa9.04□□□□□ -0.96
PPP1CA-201ENST00000312989 C9orf116Q5BN46 136 aaPredicted RBP9.03□□□□□ -0.96
PPP1CA-201ENST00000312989 C2orf82Q6UX34 121 aa9.03□□□□□ -0.96
PPP1CA-201ENST00000312989 UBR4Q5T4S7 5183 aa9.03□□□□□ -0.96
PPP1CA-201ENST00000312989 NDUFA1O15239 70 aa9.02□□□□□ -0.97
PPP1CA-201ENST00000312989 S100PP25815 95 aa9.02□□□□□ -0.97
PPP1CA-201ENST00000312989 RPL18AQ02543 176 aaKnown RBP9.02□□□□□ -0.97
PPP1CA-201ENST00000312989 SRSF9Q13242 221 aaKnown RBP eCLIP9.02□□□□□ -0.97
PPP1CA-201ENST00000312989 URB1-AS1Q96HZ7 61 aa9.02□□□□□ -0.97
PPP1CA-201ENST00000312989 VCX2Q9H322 139 aa9.02□□□□□ -0.97
PPP1CA-201ENST00000312989 RPS10P5Q9NQ39 176 aa9.02□□□□□ -0.97
PPP1CA-201ENST00000312989 A0A096LNJ9 63 aa9.01□□□□□ -0.97
PPP1CA-201ENST00000312989 Q6ZN92 141 aa9.01□□□□□ -0.97
PPP1CA-201ENST00000312989 KRTAP11-1Q8IUC1 163 aa9.01□□□□□ -0.97
PPP1CA-201ENST00000312989 C2orf88Q9BSF0 95 aa9.01□□□□□ -0.97
PPP1CA-201ENST00000312989 MRPL18Q9H0U6 180 aaKnown RBP9.01□□□□□ -0.97
PPP1CA-201ENST00000312989 FAM168BA1KXE4 195 aa9□□□□□ -0.97
PPP1CA-201ENST00000312989 MT-ND6P03923 174 aa9□□□□□ -0.97
PPP1CA-201ENST00000312989 ERASQ7Z444 233 aa9□□□□□ -0.97
PPP1CA-201ENST00000312989 CDKN2A-AS1Q9UH64 79 aa9□□□□□ -0.97
PPP1CA-201ENST00000312989 COX19Q49B96 90 aa8.99□□□□□ -0.97
PPP1CA-201ENST00000312989 PHF5AQ7RTV0 110 aaKnown RBP8.99□□□□□ -0.97
PPP1CA-201ENST00000312989 YPEL4Q96NS1 127 aa8.99□□□□□ -0.97
PPP1CA-201ENST00000312989 IGLV5-45A0A087WSX0 123 aa8.98□□□□□ -0.97
PPP1CA-201ENST00000312989 TRBV30A0A0K0K1B3 111 aa8.98□□□□□ -0.97
PPP1CA-201ENST00000312989 HERVK_113P63121 156 aa8.98□□□□□ -0.97
PPP1CA-201ENST00000312989 C9orf129Q5T035 196 aaKnown RBP8.98□□□□□ -0.97
PPP1CA-201ENST00000312989 PSORS1C2Q9UIG4 136 aa8.98□□□□□ -0.97
PPP1CA-201ENST00000312989 G0S2P27469 103 aa8.97□□□□□ -0.97
PPP1CA-201ENST00000312989 FABP9Q0Z7S8 132 aa8.97□□□□□ -0.97
PPP1CA-201ENST00000312989 Q8IZM0 81 aa8.97□□□□□ -0.97
PPP1CA-201ENST00000312989 C18orf32Q8TCD1 76 aa8.97□□□□□ -0.97
PPP1CA-201ENST00000312989 SCGB3A1Q96QR1 104 aa8.97□□□□□ -0.97
PPP1CA-201ENST00000312989 SMIM1B2RUZ4 78 aa8.96□□□□□ -0.98
PPP1CA-201ENST00000312989 APOC3P02656 99 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms