RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 FAM19A1Q7Z5A9 133 aa6.06□□□□□ -1.44
VPS41-202ENST00000310301 M0QY20 66 aa6.06□□□□□ -1.44
VPS41-202ENST00000310301 SMIM11BQ8TCY0 68 aa6.06□□□□□ -1.44
VPS41-202ENST00000310301 C2CD3Q4AC94 2353 aa6.05□□□□□ -1.44
VPS41-202ENST00000310301 FAM222AQ5U5X8 452 aa6.05□□□□□ -1.44
VPS41-202ENST00000310301 CSDC2Q9Y534 153 aaKnown RBP6.05□□□□□ -1.44
VPS41-202ENST00000310301 Q8N976 141 aa6.05□□□□□ -1.44
VPS41-202ENST00000310301 TRAV7A0A075B6U4 112 aa6.04□□□□□ -1.44
VPS41-202ENST00000310301 NRACQ8N912 160 aa6.04□□□□□ -1.44
VPS41-202ENST00000310301 ODF3Q96PU9 254 aa6.04□□□□□ -1.44
VPS41-202ENST00000310301 XAGE1AQ9HD64 81 aa6.04□□□□□ -1.44
VPS41-202ENST00000310301 Q6ZQY7 126 aa6.04□□□□□ -1.44
VPS41-202ENST00000310301 AVPP01185 164 aa6.04□□□□□ -1.44
VPS41-202ENST00000310301 C1orf229Q6ZS94 237 aaPredicted RBP6.04□□□□□ -1.44
VPS41-202ENST00000310301 LOC107984640A0A0U1RRK4 108 aa6.04□□□□□ -1.44
VPS41-202ENST00000310301 PROK1P58294 105 aa6.04□□□□□ -1.44
VPS41-202ENST00000310301 Q8N9L7 120 aa6.04□□□□□ -1.44
VPS41-202ENST00000310301 A0A087WVE0 104 aa6.03□□□□□ -1.44
VPS41-202ENST00000310301 IGLV2-11P01706 119 aa6.03□□□□□ -1.44
VPS41-202ENST00000310301 POM121L12Q8N7R1 296 aa6.03□□□□□ -1.44
VPS41-202ENST00000310301 C9orf85Q96MD7 179 aa6.03□□□□□ -1.44
VPS41-202ENST00000310301 EIF4EBP1Q13541 118 aaPredicted RBP6.03□□□□□ -1.44
VPS41-202ENST00000310301 PYGO1Q9Y3Y4 419 aa6.03□□□□□ -1.44
VPS41-202ENST00000310301 LY6LH3BQJ8 138 aa6.03□□□□□ -1.44
VPS41-202ENST00000310301 TSHBP01222 138 aa6.03□□□□□ -1.44
VPS41-202ENST00000310301 LINC00310P59036 64 aa6.03□□□□□ -1.44
VPS41-202ENST00000310301 CRIP2P52943 208 aaPredicted RBP6.02□□□□□ -1.45
VPS41-202ENST00000310301 CELA1Q9UNI1 258 aa6.02□□□□□ -1.45
VPS41-202ENST00000310301 LINC01548A6NM66 108 aa6.02□□□□□ -1.45
VPS41-202ENST00000310301 NANOS2P60321 138 aaKnown RBP6.02□□□□□ -1.45
VPS41-202ENST00000310301 DEFB114Q30KQ6 69 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 KIR2DL5BQ8NHK3 375 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 GAS8-AS1O95177 125 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 CRIP3Q6Q6R5 217 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 ABCA12Q86UK0 2595 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 KRTAP24-1Q3LI83 254 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 IGHV4-30-4P0DP06 118 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 OXLD1Q5BKU9 147 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 WFDC10AQ9H1F0 79 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 TRBV6-8A0A0A6YYG3 113 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 NUPR2A6NF83 97 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 PSPHP1O15172 72 aa6.01□□□□□ -1.45
VPS41-202ENST00000310301 ZNF580Q9UK33 172 aa6□□□□□ -1.45
VPS41-202ENST00000310301 F8P00451 2351 aa6□□□□□ -1.45
VPS41-202ENST00000310301 TRAV10A0A0B4J240 114 aa6□□□□□ -1.45
VPS41-202ENST00000310301 IGKV2-28A0A075B6P5 120 aa6□□□□□ -1.45
VPS41-202ENST00000310301 IGKV2D-28P01615 120 aa6□□□□□ -1.45
VPS41-202ENST00000310301 LINC00482Q8N8I6 264 aa6□□□□□ -1.45
VPS41-202ENST00000310301 PRYO14603 147 aa6□□□□□ -1.45
VPS41-202ENST00000310301 PPDPFQ9H3Y8 114 aa6□□□□□ -1.45
VPS41-202ENST00000310301 K7EQG2 157 aa6□□□□□ -1.45
VPS41-202ENST00000310301 UBE2D4Q9Y2X8 147 aa5.99□□□□□ -1.45
VPS41-202ENST00000310301 A0A087WZ39 114 aa5.99□□□□□ -1.45
VPS41-202ENST00000310301 URB1-AS1Q96HZ7 61 aa5.99□□□□□ -1.45
VPS41-202ENST00000310301 UBE2D1P51668 147 aa5.98□□□□□ -1.45
VPS41-202ENST00000310301 RNASE3P12724 160 aaKnown RBP5.98□□□□□ -1.45
VPS41-202ENST00000310301 MTORP42345 2549 aa5.98□□□□□ -1.45
VPS41-202ENST00000310301 NTM-AS1Q6ZSK4 140 aa5.98□□□□□ -1.45
VPS41-202ENST00000310301 Q8N6K4 173 aa5.98□□□□□ -1.45
VPS41-202ENST00000310301 DHRS4-AS1Q9P1J3 65 aa5.98□□□□□ -1.45
VPS41-202ENST00000310301 C11orf21Q9P2W6 132 aa5.98□□□□□ -1.45
VPS41-202ENST00000310301 USP9XQ93008 2570 aaPredicted RBP5.97□□□□□ -1.45
VPS41-202ENST00000310301 M0R378 163 aa5.97□□□□□ -1.45
VPS41-202ENST00000310301 CRYGDP07320 174 aa5.97□□□□□ -1.45
VPS41-202ENST00000310301 UBE2D3P61077 147 aa5.97□□□□□ -1.45
VPS41-202ENST00000310301 UBE2D2P62837 147 aa5.97□□□□□ -1.45
VPS41-202ENST00000310301 C14orf177Q52M58 125 aa5.97□□□□□ -1.45
VPS41-202ENST00000310301 POLR2KP53803 58 aaKnown RBP5.97□□□□□ -1.45
VPS41-202ENST00000310301 PRR9Q5T870 116 aa5.97□□□□□ -1.45
VPS41-202ENST00000310301 SPINK6Q6UWN8 80 aa5.97□□□□□ -1.45
VPS41-202ENST00000310301 DEFB131BA0A096LNP1 70 aa5.97□□□□□ -1.45
VPS41-202ENST00000310301 LINC00208Q96KT6 92 aa5.97□□□□□ -1.45
VPS41-202ENST00000310301 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.96□□□□□ -1.45
VPS41-202ENST00000310301 MYO9AB2RTY4 2548 aa5.96□□□□□ -1.46
VPS41-202ENST00000310301 TRBV6-4A0A1B0GX49 114 aa5.96□□□□□ -1.46
VPS41-202ENST00000310301 IGLV1-40P01703 118 aa5.96□□□□□ -1.46
VPS41-202ENST00000310301 A0A087WYN8 130 aa5.96□□□□□ -1.46
VPS41-202ENST00000310301 SYCNQ0VAF6 134 aa5.96□□□□□ -1.46
VPS41-202ENST00000310301 USP9YO00507 2555 aaPredicted RBP5.96□□□□□ -1.46
VPS41-202ENST00000310301 POLQO75417 2590 aa5.96□□□□□ -1.46
VPS41-202ENST00000310301 ZNF73O43830 326 aaPredicted RBP5.95□□□□□ -1.46
VPS41-202ENST00000310301 TRBV7-7A0A0K0K1E9 115 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 CD164L2Q6UWJ8 174 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 PRO0628Q9UI54 55 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 SRCAPQ6ZRS2 3230 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 LINC00959A0A1B0GUT2 108 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 IGIPA6NJ69 53 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 LY6G6CO95867 125 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 HECTD1Q9ULT8 2610 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 TRBV7-6A0A0J9YX20 115 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 Q8N814 137 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 PRR14LQ5THK1 2151 aa5.95□□□□□ -1.46
VPS41-202ENST00000310301 WNK1Q9H4A3 2382 aa5.94□□□□□ -1.46
VPS41-202ENST00000310301 RPL37AP8A6NKH3 93 aa5.94□□□□□ -1.46
VPS41-202ENST00000310301 BEAN1Q3B7T3 259 aa5.94□□□□□ -1.46
VPS41-202ENST00000310301 TLN2Q9Y4G6 2542 aa5.94□□□□□ -1.46
VPS41-202ENST00000310301 KIAA1549Q9HCM3 1950 aa5.94□□□□□ -1.46
VPS41-202ENST00000310301 COX17Q14061 63 aa5.94□□□□□ -1.46
VPS41-202ENST00000310301 Q8N3U1 123 aa5.94□□□□□ -1.46
VPS41-202ENST00000310301 IGLV4-69A0A075B6H9 119 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms