RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 MIR7-3HGQ8N6C7 128 aa9.26□□□□□ -0.93
RETREG3-201ENST00000309428 CITED2Q99967 270 aaPredicted RBP9.26□□□□□ -0.93
RETREG3-201ENST00000309428 TMEM126AQ9H061 195 aa9.26□□□□□ -0.93
RETREG3-201ENST00000309428 SND1-IT1Q9HBX3 110 aa9.26□□□□□ -0.93
RETREG3-201ENST00000309428 NOP10Q9NPE3 64 aaKnown RBP9.26□□□□□ -0.93
RETREG3-201ENST00000309428 LAMTOR3Q9UHA4 124 aa9.26□□□□□ -0.93
RETREG3-201ENST00000309428 K7EQG2 157 aa9.25□□□□□ -0.93
RETREG3-201ENST00000309428 HAMPP81172 84 aa9.25□□□□□ -0.93
RETREG3-201ENST00000309428 RBMY1FQ15415 496 aaKnown RBP9.25□□□□□ -0.93
RETREG3-201ENST00000309428 TRBV30A0A0K0K1B3 111 aa9.25□□□□□ -0.93
RETREG3-201ENST00000309428 XCL1P47992 114 aa9.25□□□□□ -0.93
RETREG3-201ENST00000309428 ZNF702PQ9H963 129 aa9.25□□□□□ -0.93
RETREG3-201ENST00000309428 STAB1Q9NY15 2570 aa9.25□□□□□ -0.93
RETREG3-201ENST00000309428 PEMTQ9UBM1 199 aa9.25□□□□□ -0.93
RETREG3-201ENST00000309428 HERVK_113P63121 156 aa9.24□□□□□ -0.93
RETREG3-201ENST00000309428 LOC107984640A0A0U1RRK4 108 aa9.24□□□□□ -0.93
RETREG3-201ENST00000309428 TRACP01848 142 aa9.24□□□□□ -0.93
RETREG3-201ENST00000309428 MED14OSP0DP75 135 aa9.24□□□□□ -0.93
RETREG3-201ENST00000309428 CFAP161Q6P656 301 aa9.24□□□□□ -0.93
RETREG3-201ENST00000309428 Q6ZSN1 163 aa9.23□□□□□ -0.93
RETREG3-201ENST00000309428 LINC00308Q8TCZ7 52 aa9.23□□□□□ -0.93
RETREG3-201ENST00000309428 SPANXA1Q9NS26 97 aa9.23□□□□□ -0.93
RETREG3-201ENST00000309428 S100A7L2Q5SY68 101 aa9.23□□□□□ -0.93
RETREG3-201ENST00000309428 TMEM86BQ8N661 226 aa9.23□□□□□ -0.93
RETREG3-201ENST00000309428 ODF3Q96PU9 254 aa9.23□□□□□ -0.93
RETREG3-201ENST00000309428 LINC00694P0DN24 101 aa9.23□□□□□ -0.93
RETREG3-201ENST00000309428 TENM4Q6N022 2769 aa9.23□□□□□ -0.93
RETREG3-201ENST00000309428 IGLV10-54A0A075B6I4 117 aa9.22□□□□□ -0.93
RETREG3-201ENST00000309428 KLLNB2CW77 178 aa9.22□□□□□ -0.93
RETREG3-201ENST00000309428 LST1O00453 97 aa9.22□□□□□ -0.93
RETREG3-201ENST00000309428 TMEM243Q9BU79 118 aa9.22□□□□□ -0.93
RETREG3-201ENST00000309428 MALP21145 153 aa9.22□□□□□ -0.93
RETREG3-201ENST00000309428 DSCR9P59020 149 aa9.22□□□□□ -0.93
RETREG3-201ENST00000309428 A0A087WVE0 104 aa9.21□□□□□ -0.93
RETREG3-201ENST00000309428 PPDPFQ9H3Y8 114 aa9.21□□□□□ -0.93
RETREG3-201ENST00000309428 PF4P02776 101 aa9.21□□□□□ -0.94
RETREG3-201ENST00000309428 Q6ZTI0 123 aa9.21□□□□□ -0.94
RETREG3-201ENST00000309428 M0QXV9 152 aa9.21□□□□□ -0.94
RETREG3-201ENST00000309428 CCL24O00175 119 aa9.21□□□□□ -0.94
RETREG3-201ENST00000309428 NCR3O14931 201 aa9.21□□□□□ -0.94
RETREG3-201ENST00000309428 VWFP04275 2813 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 DNAJC9-AS1A6NH13 148 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 WFDC9Q8NEX5 89 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 MAP6D1Q9H9H5 199 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 TRAV23DV6A0A075B6W5 121 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 H3BUA1 57 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 COX7A2LO14548 114 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 LINC00315P59091 139 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 Q6YL49 198 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 LINC00643Q86TS7 51 aa9.2□□□□□ -0.94
RETREG3-201ENST00000309428 ZNF469Q96JG9 3925 aaPredicted RBP9.2□□□□□ -0.94
RETREG3-201ENST00000309428 EIF4EBP3O60516 100 aaPredicted RBP9.19□□□□□ -0.94
RETREG3-201ENST00000309428 KIF25-AS1Q9Y6Z4 181 aa9.19□□□□□ -0.94
RETREG3-201ENST00000309428 LOC100131303A0A0U1RQF7 123 aa9.19□□□□□ -0.94
RETREG3-201ENST00000309428 TIRAPP58753 221 aa9.19□□□□□ -0.94
RETREG3-201ENST00000309428 TRAV13-2A0A0B4J235 113 aa9.18□□□□□ -0.94
RETREG3-201ENST00000309428 COX6A2Q02221 97 aa9.18□□□□□ -0.94
RETREG3-201ENST00000309428 K7EMT4 169 aa9.18□□□□□ -0.94
RETREG3-201ENST00000309428 TRBV6-5A0A0K0K1A5 114 aa9.18□□□□□ -0.94
RETREG3-201ENST00000309428 LINC01546A6NGU7 62 aa9.18□□□□□ -0.94
RETREG3-201ENST00000309428 NHLRC4P0CG21 123 aaPredicted RBP9.18□□□□□ -0.94
RETREG3-201ENST00000309428 Q8N2B8 174 aa9.17□□□□□ -0.94
RETREG3-201ENST00000309428 ACYP1P07311 99 aa9.17□□□□□ -0.94
RETREG3-201ENST00000309428 C9orf85Q96MD7 179 aa9.16□□□□□ -0.94
RETREG3-201ENST00000309428 COL6A5A8TX70 2615 aa9.16□□□□□ -0.94
RETREG3-201ENST00000309428 DSCR8Q96T75 97 aa9.15□□□□□ -0.94
RETREG3-201ENST00000309428 UBE2D4Q9Y2X8 147 aa9.15□□□□□ -0.94
RETREG3-201ENST00000309428 C3orf22Q8N5N4 141 aa9.15□□□□□ -0.94
RETREG3-201ENST00000309428 PDZD2O15018 2839 aa9.15□□□□□ -0.94
RETREG3-201ENST00000309428 MRPS36P82909 103 aaKnown RBP9.15□□□□□ -0.95
RETREG3-201ENST00000309428 DEFB114Q30KQ6 69 aa9.15□□□□□ -0.95
RETREG3-201ENST00000309428 RNF152Q8N8N0 203 aa9.15□□□□□ -0.95
RETREG3-201ENST00000309428 J3KT08 172 aa9.14□□□□□ -0.95
RETREG3-201ENST00000309428 UQCRQO14949 82 aa9.14□□□□□ -0.95
RETREG3-201ENST00000309428 C20orf197Q8N268 126 aa9.14□□□□□ -0.95
RETREG3-201ENST00000309428 LINC00482Q8N8I6 264 aa9.14□□□□□ -0.95
RETREG3-201ENST00000309428 COX7B2Q8TF08 81 aa9.14□□□□□ -0.95
RETREG3-201ENST00000309428 ATOX1O00244 68 aa9.13□□□□□ -0.95
RETREG3-201ENST00000309428 J3QLI3 93 aa9.13□□□□□ -0.95
RETREG3-201ENST00000309428 ODF3L2Q3SX64 289 aa9.13□□□□□ -0.95
RETREG3-201ENST00000309428 UBL5Q9BZL1 73 aa9.13□□□□□ -0.95
RETREG3-201ENST00000309428 TENM1Q9UKZ4 2725 aa9.12□□□□□ -0.95
RETREG3-201ENST00000309428 PRB2P02812 416 aaPredicted RBP9.12□□□□□ -0.95
RETREG3-201ENST00000309428 ORMDL1Q9P0S3 153 aa9.12□□□□□ -0.95
RETREG3-201ENST00000309428 OTOGQ6ZRI0 2925 aa9.11□□□□□ -0.95
RETREG3-201ENST00000309428 NDUFA1O15239 70 aa9.11□□□□□ -0.95
RETREG3-201ENST00000309428 LINC00242Q5T6M2 205 aa9.11□□□□□ -0.95
RETREG3-201ENST00000309428 K7EQD1 137 aa9.11□□□□□ -0.95
RETREG3-201ENST00000309428 AMELXQ99217 191 aa9.11□□□□□ -0.95
RETREG3-201ENST00000309428 GHRHP01286 108 aa9.11□□□□□ -0.95
RETREG3-201ENST00000309428 SPANXDQ9BXN6 97 aa9.11□□□□□ -0.95
RETREG3-201ENST00000309428 SPANXCQ9NY87 97 aa9.11□□□□□ -0.95
RETREG3-201ENST00000309428 PRR3P79522 188 aaKnown RBP9.1□□□□□ -0.95
RETREG3-201ENST00000309428 SCXQ7RTU7 201 aa9.1□□□□□ -0.95
RETREG3-201ENST00000309428 LINC00526Q96FQ7 95 aa9.1□□□□□ -0.95
RETREG3-201ENST00000309428 DNAJC30Q96LL9 226 aa9.1□□□□□ -0.95
RETREG3-201ENST00000309428 ANGP03950 147 aaKnown RBP9.09□□□□□ -0.95
RETREG3-201ENST00000309428 SS18Q15532 418 aa9.09□□□□□ -0.95
RETREG3-201ENST00000309428 ENHOQ6UWT2 76 aa9.09□□□□□ -0.95
RETREG3-201ENST00000309428 CR1P17927 2039 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 82.6 ms