RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 DAZ4Q86SG3 579 aaKnown RBP10.57□□□□□ -0.72
PTPN9-201ENST00000306726 C14orf132Q9NPU4 83 aa10.57□□□□□ -0.72
PTPN9-201ENST00000306726 DAZ3Q9NR90 486 aaKnown RBP10.57□□□□□ -0.72
PTPN9-201ENST00000306726 PSMB8P28062 276 aa10.57□□□□□ -0.72
PTPN9-201ENST00000306726 MIR7-3HGQ8N6C7 128 aa10.57□□□□□ -0.72
PTPN9-201ENST00000306726 VPREB3Q9UKI3 123 aa10.56□□□□□ -0.72
PTPN9-201ENST00000306726 SDIM1Q6ZPB5 146 aa10.56□□□□□ -0.72
PTPN9-201ENST00000306726 RBMY1BA6NDE4 496 aaKnown RBP10.56□□□□□ -0.72
PTPN9-201ENST00000306726 RBMY1EA6NEQ0 496 aaKnown RBP10.56□□□□□ -0.72
PTPN9-201ENST00000306726 RBMY1DP0C7P1 496 aaKnown RBP10.56□□□□□ -0.72
PTPN9-201ENST00000306726 SETXQ7Z333 2677 aaKnown RBP10.55□□□□□ -0.72
PTPN9-201ENST00000306726 A0A0B4J2C4 111 aa10.55□□□□□ -0.72
PTPN9-201ENST00000306726 C6orf226Q5I0X4 101 aa10.55□□□□□ -0.72
PTPN9-201ENST00000306726 ODF3Q96PU9 254 aa10.55□□□□□ -0.72
PTPN9-201ENST00000306726 LINC00308Q8TCZ7 52 aa10.55□□□□□ -0.72
PTPN9-201ENST00000306726 IGLV1-40P01703 118 aa10.54□□□□□ -0.72
PTPN9-201ENST00000306726 MED14OSP0DP75 135 aa10.54□□□□□ -0.72
PTPN9-201ENST00000306726 LINC00526Q96FQ7 95 aa10.54□□□□□ -0.72
PTPN9-201ENST00000306726 UBE2D4Q9Y2X8 147 aa10.54□□□□□ -0.72
PTPN9-201ENST00000306726 TEP1Q99973 2627 aaKnown RBP10.54□□□□□ -0.72
PTPN9-201ENST00000306726 PRR3P79522 188 aaKnown RBP10.53□□□□□ -0.72
PTPN9-201ENST00000306726 LINC01619G3V211 115 aa10.53□□□□□ -0.72
PTPN9-201ENST00000306726 MAP6D1Q9H9H5 199 aa10.53□□□□□ -0.72
PTPN9-201ENST00000306726 WFDC9Q8NEX5 89 aa10.53□□□□□ -0.72
PTPN9-201ENST00000306726 ITPR2Q14571 2701 aa10.52□□□□□ -0.72
PTPN9-201ENST00000306726 LECT2O14960 151 aa10.52□□□□□ -0.73
PTPN9-201ENST00000306726 PEMTQ9UBM1 199 aa10.52□□□□□ -0.73
PTPN9-201ENST00000306726 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
PTPN9-201ENST00000306726 K7EMT4 169 aa10.51□□□□□ -0.73
PTPN9-201ENST00000306726 CHCHD7Q9BUK0 85 aa10.51□□□□□ -0.73
PTPN9-201ENST00000306726 SND1-IT1Q9HBX3 110 aa10.51□□□□□ -0.73
PTPN9-201ENST00000306726 NBEAL1Q6ZS30 2694 aa10.51□□□□□ -0.73
PTPN9-201ENST00000306726 A0A087WVE0 104 aa10.51□□□□□ -0.73
PTPN9-201ENST00000306726 NHLRC4P0CG21 123 aaPredicted RBP10.51□□□□□ -0.73
PTPN9-201ENST00000306726 TRBV30A0A0K0K1B3 111 aa10.5□□□□□ -0.73
PTPN9-201ENST00000306726 NCR3O14931 201 aa10.5□□□□□ -0.73
PTPN9-201ENST00000306726 FAM19A4Q96LR4 140 aa10.5□□□□□ -0.73
PTPN9-201ENST00000306726 PDZD2O15018 2839 aa10.5□□□□□ -0.73
PTPN9-201ENST00000306726 LINC00242Q5T6M2 205 aa10.49□□□□□ -0.73
PTPN9-201ENST00000306726 H3BUA1 57 aa10.49□□□□□ -0.73
PTPN9-201ENST00000306726 MRPS36P82909 103 aaKnown RBP10.49□□□□□ -0.73
PTPN9-201ENST00000306726 TMEM89A2RUT3 159 aa10.49□□□□□ -0.73
PTPN9-201ENST00000306726 HILS1P60008 231 aa10.49□□□□□ -0.73
PTPN9-201ENST00000306726 BRI3O95415 125 aa10.48□□□□□ -0.73
PTPN9-201ENST00000306726 SHISA2Q6UWI4 295 aa10.48□□□□□ -0.73
PTPN9-201ENST00000306726 SOSTDC1Q6X4U4 206 aa10.48□□□□□ -0.73
PTPN9-201ENST00000306726 SPANXA1Q9NS26 97 aa10.48□□□□□ -0.73
PTPN9-201ENST00000306726 LST1O00453 97 aa10.48□□□□□ -0.73
PTPN9-201ENST00000306726 TMEM243Q9BU79 118 aa10.48□□□□□ -0.73
PTPN9-201ENST00000306726 HERVK_113P63121 156 aa10.48□□□□□ -0.73
PTPN9-201ENST00000306726 HIVEP1P15822 2718 aa10.47□□□□□ -0.73
PTPN9-201ENST00000306726 RPL32P62910 135 aaKnown RBP10.47□□□□□ -0.73
PTPN9-201ENST00000306726 LOC107984640A0A0U1RRK4 108 aa10.46□□□□□ -0.73
PTPN9-201ENST00000306726 FAM218AQ96MZ4 157 aa10.46□□□□□ -0.73
PTPN9-201ENST00000306726 CITED2Q99967 270 aaPredicted RBP10.46□□□□□ -0.73
PTPN9-201ENST00000306726 DNAJC9-AS1A6NH13 148 aa10.46□□□□□ -0.74
PTPN9-201ENST00000306726 KLK9Q2XQG4 91 aa10.45□□□□□ -0.74
PTPN9-201ENST00000306726 LITAFQ99732 161 aa10.45□□□□□ -0.74
PTPN9-201ENST00000306726 TIRAPP58753 221 aa10.45□□□□□ -0.74
PTPN9-201ENST00000306726 H3BT86 120 aa10.44□□□□□ -0.74
PTPN9-201ENST00000306726 CITED1Q99966 193 aa10.44□□□□□ -0.74
PTPN9-201ENST00000306726 hADV29S1A0JD25 119 aa10.43□□□□□ -0.74
PTPN9-201ENST00000306726 BAHCC1Q9P281 2608 aa10.43□□□□□ -0.74
PTPN9-201ENST00000306726 NOTCH1P46531 2555 aa10.43□□□□□ -0.74
PTPN9-201ENST00000306726 INAFM1C9JVW0 142 aa10.43□□□□□ -0.74
PTPN9-201ENST00000306726 K7EQD1 137 aa10.43□□□□□ -0.74
PTPN9-201ENST00000306726 ZNF702PQ9H963 129 aa10.43□□□□□ -0.74
PTPN9-201ENST00000306726 A8MTW9 85 aa10.43□□□□□ -0.74
PTPN9-201ENST00000306726 C16orf95Q9H693 158 aa10.43□□□□□ -0.74
PTPN9-201ENST00000306726 IGLV4-60A0A075B6I1 120 aa10.42□□□□□ -0.74
PTPN9-201ENST00000306726 A0A087WYN8 130 aa10.42□□□□□ -0.74
PTPN9-201ENST00000306726 COX7A2LO14548 114 aa10.42□□□□□ -0.74
PTPN9-201ENST00000306726 SMR3AQ99954 134 aa10.42□□□□□ -0.74
PTPN9-201ENST00000306726 SMIM1B2RUZ4 78 aa10.42□□□□□ -0.74
PTPN9-201ENST00000306726 CCL24O00175 119 aa10.42□□□□□ -0.74
PTPN9-201ENST00000306726 DEFB114Q30KQ6 69 aa10.42□□□□□ -0.74
PTPN9-201ENST00000306726 A0A1B0GX51 115 aa10.42□□□□□ -0.74
PTPN9-201ENST00000306726 ODF3L2Q3SX64 289 aa10.41□□□□□ -0.74
PTPN9-201ENST00000306726 C9orf116Q5BN46 136 aaPredicted RBP10.41□□□□□ -0.74
PTPN9-201ENST00000306726 CFAP161Q6P656 301 aa10.41□□□□□ -0.74
PTPN9-201ENST00000306726 NTM-AS1Q6ZSK4 140 aa10.41□□□□□ -0.74
PTPN9-201ENST00000306726 MALP21145 153 aa10.41□□□□□ -0.74
PTPN9-201ENST00000306726 COX7B2Q8TF08 81 aa10.41□□□□□ -0.74
PTPN9-201ENST00000306726 NDUFA1O15239 70 aa10.39□□□□□ -0.75
PTPN9-201ENST00000306726 C1orf158Q8N1D5 194 aa10.39□□□□□ -0.75
PTPN9-201ENST00000306726 PPDPFQ9H3Y8 114 aa10.39□□□□□ -0.75
PTPN9-201ENST00000306726 LAMTOR3Q9UHA4 124 aa10.39□□□□□ -0.75
PTPN9-201ENST00000306726 TRAV23DV6A0A075B6W5 121 aa10.39□□□□□ -0.75
PTPN9-201ENST00000306726 C9orf129Q5T035 196 aaKnown RBP10.39□□□□□ -0.75
PTPN9-201ENST00000306726 SMIM11BQ8TCY0 68 aa10.39□□□□□ -0.75
PTPN9-201ENST00000306726 HAMPP81172 84 aa10.38□□□□□ -0.75
PTPN9-201ENST00000306726 LINC00337Q8N6G1 96 aa10.38□□□□□ -0.75
PTPN9-201ENST00000306726 SMCR5Q8TEV8 140 aa10.38□□□□□ -0.75
PTPN9-201ENST00000306726 PYGO1Q9Y3Y4 419 aa10.38□□□□□ -0.75
PTPN9-201ENST00000306726 PF4P02776 101 aa10.38□□□□□ -0.75
PTPN9-201ENST00000306726 GYPEP15421 78 aa10.38□□□□□ -0.75
PTPN9-201ENST00000306726 S100A7L2Q5SY68 101 aa10.38□□□□□ -0.75
PTPN9-201ENST00000306726 SBSPONQ8IVN8 264 aa10.38□□□□□ -0.75
PTPN9-201ENST00000306726 ANGP03950 147 aaKnown RBP10.37□□□□□ -0.75
PTPN9-201ENST00000306726 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms