RNA–Protein interactions for RNA: ENST00000305366.7

TM4SF1-201, Transcript of transmembrane 4 L six family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM4SF1, Length 1,771 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-201ENST00000305366 SPANXCQ9NY87 97 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 LYSTQ99698 3801 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 IGLV4-3A0A075B6K6 122 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 TMEM223A0PJW6 202 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 J3QQQ9 107 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 M0R2P5 195 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 TSPEAR-AS2P59090 65 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 RNF183Q96D59 192 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 PRO0628Q9UI54 55 aa5.6□□□□□ -1.51
TM4SF1-201ENST00000305366 RHODO00212 210 aa5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 IGHV3-30P01768 117 aa5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 IGHV3-30-5P0DP03 117 aa5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 ZNF22P17026 224 aaPredicted RBP5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 LGALS3P17931 250 aaKnown RBP5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 EMP1P54849 157 aa5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 FAM19A5Q7Z5A7 132 aaPredicted RBP5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 LINC00476Q8WZB0 136 aa5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 DNAJC30Q96LL9 226 aa5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 PPDPFQ9H3Y8 114 aa5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 PRO0461Q9UI25 63 aa5.59□□□□□ -1.51
TM4SF1-201ENST00000305366 TEX48A0A1B0GUV7 120 aa5.58□□□□□ -1.52
TM4SF1-201ENST00000305366 GYPEP15421 78 aa5.58□□□□□ -1.52
TM4SF1-201ENST00000305366 LYRM7Q5U5X0 104 aa5.58□□□□□ -1.52
TM4SF1-201ENST00000305366 MAP6D1Q9H9H5 199 aa5.58□□□□□ -1.52
TM4SF1-201ENST00000305366 MRPL16Q9NX20 251 aaKnown RBP5.58□□□□□ -1.52
TM4SF1-201ENST00000305366 AGRNO00468 2067 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 H3BMG7 143 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 APOC4P55056 127 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 UBE2D3P61077 147 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 UBE2D2P62837 147 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 MRPS36P82909 103 aaKnown RBP5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 WFDC2Q14508 124 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 GAGE13Q4V321 117 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 CEMP1Q6PRD7 247 aaPredicted RBP5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 Q8N3U1 123 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 C11orf72Q8NBR9 251 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 DEFB104AQ8WTQ1 72 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 OPRPNQ99935 248 aaPredicted RBP5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 PLECQ15149 4684 aaKnown RBP5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 J3QR89 54 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 FAM19A1Q7Z5A9 133 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 FAM104AQ969W3 186 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 TMEM126AQ9H061 195 aa5.57□□□□□ -1.52
TM4SF1-201ENST00000305366 A0A0J9YXV3 536 aa5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 NUPR2A6NF83 97 aa5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 DEFB4AO15263 64 aa5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 INSP01308 110 aa5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 IGHV3-53P01767 116 aa5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 CFC1BP0CG36 223 aa5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 CFC1P0CG37 223 aa5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 CFAP126Q5VTH2 177 aa5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 C10orf126Q8N4M7 172 aa5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 KLK5Q9Y337 293 aaPredicted RBP5.56□□□□□ -1.52
TM4SF1-201ENST00000305366 TRBV20-1A0A075B6N2 111 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 A0A0B4J2C4 111 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 ODF3L2Q3SX64 289 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 ATP6V0E2Q8NHE4 81 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 CHCHD7Q9BUK0 85 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 IGHV3-73A0A0B4J1V6 119 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 APOMO95445 188 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 HTN1P15515 57 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 NANOS2P60321 138 aaKnown RBP5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 CD164Q04900 197 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 LINC01587Q99440 93 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 PRO1854Q9UHT4 67 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 UBE2D4Q9Y2X8 147 aa5.55□□□□□ -1.52
TM4SF1-201ENST00000305366 IGHV1-58A0A0C4DH39 117 aa5.54□□□□□ -1.52
TM4SF1-201ENST00000305366 XGP55808 180 aa5.54□□□□□ -1.52
TM4SF1-201ENST00000305366 C4orf26Q17RF5 130 aa5.54□□□□□ -1.52
TM4SF1-201ENST00000305366 ETDBQ3ZM63 59 aa5.54□□□□□ -1.52
TM4SF1-201ENST00000305366 Q6ZSN1 163 aa5.54□□□□□ -1.52
TM4SF1-201ENST00000305366 TIMM21Q9BVV7 248 aa5.54□□□□□ -1.52
TM4SF1-201ENST00000305366 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.53□□□□□ -1.52
TM4SF1-201ENST00000305366 A0A0J9YXY3 114 aa5.53□□□□□ -1.52
TM4SF1-201ENST00000305366 H3BS24 57 aa5.53□□□□□ -1.52
TM4SF1-201ENST00000305366 J3QL48 77 aa5.53□□□□□ -1.52
TM4SF1-201ENST00000305366 IGHV3-30-3P0DP02 117 aa5.53□□□□□ -1.52
TM4SF1-201ENST00000305366 SH2D6Q7Z4S9 175 aa5.53□□□□□ -1.52
TM4SF1-201ENST00000305366 C11orf45Q8TAV5 145 aa5.53□□□□□ -1.52
TM4SF1-201ENST00000305366 Q9H8V8 135 aa5.53□□□□□ -1.52
TM4SF1-201ENST00000305366 LOC107984156A0A0G2JMH3 177 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 IGHV3-33P01772 117 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 PRM2P04554 102 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 SMCPP49901 116 aaPredicted RBP5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 ARL17AQ8IVW1 177 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 TMEM263Q8WUH6 116 aaKnown RBP5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 C1QTNF4Q9BXJ3 329 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 SPANXDQ9BXN6 97 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 ERG28Q9UKR5 140 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 ALMS1Q8TCU4 4167 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 IGLV5-45A0A087WSX0 123 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 TRBV10-1A0A0K0K1A3 114 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 AZU1P20160 251 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 PSMB2P49721 201 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 CMC4P56277 68 aaPredicted RBP5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 MUSTN1Q8IVN3 82 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 C1orf158Q8N1D5 194 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 VSIG2Q96IQ7 327 aa5.52□□□□□ -1.53
TM4SF1-201ENST00000305366 LITAFQ99732 161 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms