RNA–Protein interactions for RNA: ENST00000302500.4

CLCC1-201, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-201ENST00000302500 LINC01546A6NGU7 62 aa7.07□□□□□ -1.28
CLCC1-201ENST00000302500 SS18Q15532 418 aa7.07□□□□□ -1.28
CLCC1-201ENST00000302500 TRAV9-1A0A075B6T8 112 aa7.06□□□□□ -1.28
CLCC1-201ENST00000302500 IGIPA6NJ69 53 aa7.06□□□□□ -1.28
CLCC1-201ENST00000302500 FAM19A3Q7Z5A8 133 aa7.06□□□□□ -1.28
CLCC1-201ENST00000302500 Q8N8P6 123 aa7.06□□□□□ -1.28
CLCC1-201ENST00000302500 AP5S1Q9NUS5 200 aa7.06□□□□□ -1.28
CLCC1-201ENST00000302500 IGLV4-69A0A075B6H9 119 aa7.05□□□□□ -1.28
CLCC1-201ENST00000302500 TRAV13-1A0A0B4J241 112 aa7.05□□□□□ -1.28
CLCC1-201ENST00000302500 KIAA0087Q14695 138 aa7.05□□□□□ -1.28
CLCC1-201ENST00000302500 Q6ZRU5 148 aa7.05□□□□□ -1.28
CLCC1-201ENST00000302500 AMELXQ99217 191 aa7.05□□□□□ -1.28
CLCC1-201ENST00000302500 CTDSP1Q9GZU7 261 aa7.05□□□□□ -1.28
CLCC1-201ENST00000302500 MRPL18Q9H0U6 180 aaKnown RBP7.05□□□□□ -1.28
CLCC1-201ENST00000302500 COX7A2LO14548 114 aa7.04□□□□□ -1.28
CLCC1-201ENST00000302500 MT1HL1P0DM35 61 aa7.04□□□□□ -1.28
CLCC1-201ENST00000302500 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
CLCC1-201ENST00000302500 COMMD7Q86VX2 200 aa7.04□□□□□ -1.28
CLCC1-201ENST00000302500 C2orf48Q96LS8 159 aa7.04□□□□□ -1.28
CLCC1-201ENST00000302500 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.03□□□□□ -1.28
CLCC1-201ENST00000302500 K7EMI3 77 aa7.03□□□□□ -1.28
CLCC1-201ENST00000302500 UBE2D1P51668 147 aa7.03□□□□□ -1.28
CLCC1-201ENST00000302500 RPL37AP61513 92 aaKnown RBP7.03□□□□□ -1.28
CLCC1-201ENST00000302500 C5orf38Q86SI9 138 aa7.03□□□□□ -1.28
CLCC1-201ENST00000302500 TMEM18Q96B42 140 aa7.03□□□□□ -1.28
CLCC1-201ENST00000302500 CARD19Q96LW7 228 aa7.03□□□□□ -1.28
CLCC1-201ENST00000302500 A0A087WZ39 114 aa7.02□□□□□ -1.28
CLCC1-201ENST00000302500 NPSP0C0P6 89 aa7.02□□□□□ -1.28
CLCC1-201ENST00000302500 SYCNQ0VAF6 134 aa7.02□□□□□ -1.28
CLCC1-201ENST00000302500 SMAGPQ0VAQ4 97 aa7.02□□□□□ -1.28
CLCC1-201ENST00000302500 ZC2HC1BQ5TFG8 222 aa7.02□□□□□ -1.28
CLCC1-201ENST00000302500 GNB1LQ9BYB4 327 aa7.02□□□□□ -1.28
CLCC1-201ENST00000302500 MAP1LC3AQ9H492 121 aa7.02□□□□□ -1.28
CLCC1-201ENST00000302500 LOC389332A0A1B0GUA5 103 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 IFI27P40305 119 aaPredicted RBP7.01□□□□□ -1.29
CLCC1-201ENST00000302500 PTTG1IPP53801 180 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 C10orf25Q5T742 122 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 C2orf66Q6UXQ4 117 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 KRTAP7-1Q8IUC3 87 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 YPEL4Q96NS1 127 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 ALKBH7Q9BT30 221 aaPredicted RBP7.01□□□□□ -1.29
CLCC1-201ENST00000302500 A0A1W2PNN7 141 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 OXTP01178 125 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 RNF151Q2KHN1 245 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 KIAA1644Q3SXP7 199 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 URB1-AS1Q96HZ7 61 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 TMEM141Q96I45 108 aa7.01□□□□□ -1.29
CLCC1-201ENST00000302500 MRPL35Q9NZE8 188 aaKnown RBP7.01□□□□□ -1.29
CLCC1-201ENST00000302500 A0A096LNJ9 63 aa7□□□□□ -1.29
CLCC1-201ENST00000302500 IGKV2-24A0A0C4DH68 120 aa7□□□□□ -1.29
CLCC1-201ENST00000302500 IFITM10A6NMD0 228 aa7□□□□□ -1.29
CLCC1-201ENST00000302500 TLX1NBP0CAT3 122 aa7□□□□□ -1.29
CLCC1-201ENST00000302500 RHEBQ15382 184 aa7□□□□□ -1.29
CLCC1-201ENST00000302500 STPG4Q8N801 248 aa7□□□□□ -1.29
CLCC1-201ENST00000302500 TOMM6Q96B49 74 aa7□□□□□ -1.29
CLCC1-201ENST00000302500 NXT2Q9NPJ8 142 aaKnown RBP7□□□□□ -1.29
CLCC1-201ENST00000302500 CYSLTR1Q9Y271 337 aa7□□□□□ -1.29
CLCC1-201ENST00000302500 ZNF561-AS1K7EIQ3 104 aa6.99□□□□□ -1.29
CLCC1-201ENST00000302500 APOMO95445 188 aa6.99□□□□□ -1.29
CLCC1-201ENST00000302500 RAB5AP20339 215 aa6.99□□□□□ -1.29
CLCC1-201ENST00000302500 PRR3P79522 188 aaKnown RBP6.99□□□□□ -1.29
CLCC1-201ENST00000302500 SPAG11BQ08648 103 aa6.99□□□□□ -1.29
CLCC1-201ENST00000302500 MAJINQ3KP22 176 aa6.99□□□□□ -1.29
CLCC1-201ENST00000302500 ORMDL2Q53FV1 153 aa6.99□□□□□ -1.29
CLCC1-201ENST00000302500 LINC01561Q8N1V8 128 aa6.99□□□□□ -1.29
CLCC1-201ENST00000302500 TIMM17AQ99595 171 aa6.99□□□□□ -1.29
CLCC1-201ENST00000302500 C6orf48Q9UBA6 75 aa6.99□□□□□ -1.29
CLCC1-201ENST00000302500 F8WDY8 70 aa6.98□□□□□ -1.29
CLCC1-201ENST00000302500 SRSF9Q13242 221 aaKnown RBP eCLIP6.98□□□□□ -1.29
CLCC1-201ENST00000302500 LINC00474Q9P2X8 69 aa6.98□□□□□ -1.29
CLCC1-201ENST00000302500 UBR4Q5T4S7 5183 aa6.97□□□□□ -1.29
CLCC1-201ENST00000302500 A0A0J9YXV3 536 aa6.97□□□□□ -1.29
CLCC1-201ENST00000302500 LOC107984640A0A0U1RRK4 108 aa6.97□□□□□ -1.29
CLCC1-201ENST00000302500 MALP21145 153 aa6.97□□□□□ -1.29
CLCC1-201ENST00000302500 UNQ6190/PRO20217Q6UXQ8 127 aa6.97□□□□□ -1.29
CLCC1-201ENST00000302500 Q6ZRP5 223 aa6.97□□□□□ -1.29
CLCC1-201ENST00000302500 KRTAP11-1Q8IUC1 163 aa6.97□□□□□ -1.29
CLCC1-201ENST00000302500 ORAOV1Q8WV07 137 aa6.97□□□□□ -1.29
CLCC1-201ENST00000302500 CAMK2N2Q96S95 79 aa6.97□□□□□ -1.29
CLCC1-201ENST00000302500 IGLV5-45A0A087WSX0 123 aa6.96□□□□□ -1.3
CLCC1-201ENST00000302500 TEX43Q6ZNM6 134 aa6.96□□□□□ -1.3
CLCC1-201ENST00000302500 TGIF2-C20orf24A0A0A6YYL0 155 aa6.95□□□□□ -1.3
CLCC1-201ENST00000302500 MT-ND6P03923 174 aa6.95□□□□□ -1.3
CLCC1-201ENST00000302500 ERASQ7Z444 233 aa6.95□□□□□ -1.3
CLCC1-201ENST00000302500 COX19Q49B96 90 aa6.94□□□□□ -1.3
CLCC1-201ENST00000302500 C9orf116Q5BN46 136 aaPredicted RBP6.94□□□□□ -1.3
CLCC1-201ENST00000302500 CDKN2A-AS1Q9UH64 79 aa6.94□□□□□ -1.3
CLCC1-201ENST00000302500 FAM168BA1KXE4 195 aa6.93□□□□□ -1.3
CLCC1-201ENST00000302500 C2orf82Q6UX34 121 aa6.93□□□□□ -1.3
CLCC1-201ENST00000302500 C18orf32Q8TCD1 76 aa6.93□□□□□ -1.3
CLCC1-201ENST00000302500 RPS10P5Q9NQ39 176 aa6.93□□□□□ -1.3
CLCC1-201ENST00000302500 PKIGQ9Y2B9 76 aa6.93□□□□□ -1.3
CLCC1-201ENST00000302500 LRP2P98164 4655 aa6.92□□□□□ -1.3
CLCC1-201ENST00000302500 TRBV30A0A0K0K1B3 111 aa6.92□□□□□ -1.3
CLCC1-201ENST00000302500 NDUFA1O15239 70 aa6.92□□□□□ -1.3
CLCC1-201ENST00000302500 S100PP25815 95 aa6.92□□□□□ -1.3
CLCC1-201ENST00000302500 GAGE2BQ13066 116 aa6.92□□□□□ -1.3
CLCC1-201ENST00000302500 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
CLCC1-201ENST00000302500 VCX2Q9H322 139 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms