RNA–Protein interactions for RNA: ENST00000298875.8

CPSF2-201, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF2, Length 13,035 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-201ENST00000298875 TLN2Q9Y4G6 2542 aa4.15□□□□□ -1.75
CPSF2-201ENST00000298875 CNFNQ9BYD5 112 aa4.15□□□□□ -1.75
CPSF2-201ENST00000298875 COL5A1P20908 1838 aaPredicted RBP4.15□□□□□ -1.75
CPSF2-201ENST00000298875 CD164Q04900 197 aa4.15□□□□□ -1.75
CPSF2-201ENST00000298875 MRGPRG-AS1Q2M3A8 158 aa4.15□□□□□ -1.75
CPSF2-201ENST00000298875 A8MZ25 164 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 OXLD1Q5BKU9 147 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 LINC00474Q9P2X8 69 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 TRBV7-6A0A0J9YX20 115 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 WFDC13Q8IUB5 93 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 DEFB131BA0A096LNP1 70 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 ZNF843Q8N446 348 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 H3BPC8 53 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 COL4A3Q01955 1670 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 TRBV6-8A0A0A6YYG3 113 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 ODF3BA8MYP8 253 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 ZNF22P17026 224 aaPredicted RBP4.14□□□□□ -1.75
CPSF2-201ENST00000298875 TMEM254Q8TBM7 123 aa4.14□□□□□ -1.75
CPSF2-201ENST00000298875 IGLV9-49A0A0B4J1Y8 123 aa4.13□□□□□ -1.75
CPSF2-201ENST00000298875 IGLV2-8P01709 118 aa4.13□□□□□ -1.75
CPSF2-201ENST00000298875 GPR179Q6PRD1 2367 aa4.13□□□□□ -1.75
CPSF2-201ENST00000298875 PROK1P58294 105 aa4.13□□□□□ -1.75
CPSF2-201ENST00000298875 ZFAND3Q9H8U3 227 aa4.13□□□□□ -1.75
CPSF2-201ENST00000298875 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.13□□□□□ -1.75
CPSF2-201ENST00000298875 BEAN1Q3B7T3 259 aa4.13□□□□□ -1.75
CPSF2-201ENST00000298875 SMIM11BQ8TCY0 68 aa4.13□□□□□ -1.75
CPSF2-201ENST00000298875 RPL37AP8A6NKH3 93 aa4.13□□□□□ -1.75
CPSF2-201ENST00000298875 M0QY20 66 aa4.12□□□□□ -1.75
CPSF2-201ENST00000298875 TSHBP01222 138 aa4.12□□□□□ -1.75
CPSF2-201ENST00000298875 LINC00574Q9H8X3 128 aa4.12□□□□□ -1.75
CPSF2-201ENST00000298875 C6orf99Q4VX62 202 aa4.12□□□□□ -1.75
CPSF2-201ENST00000298875 RAI1Q7Z5J4 1906 aaPredicted RBP4.12□□□□□ -1.75
CPSF2-201ENST00000298875 PLA2G2AP14555 144 aa4.12□□□□□ -1.75
CPSF2-201ENST00000298875 NANOS2P60321 138 aaKnown RBP4.12□□□□□ -1.75
CPSF2-201ENST00000298875 POM121L12Q8N7R1 296 aa4.12□□□□□ -1.75
CPSF2-201ENST00000298875 LY6LH3BQJ8 138 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 MSMPQ1L6U9 139 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 CYP4F30PQ9H0H9 118 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 C8orf87E5RJ46 101 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 K7EQG2 157 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 NCOR2Q9Y618 2525 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 M0R378 163 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 PRM2P04554 102 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 Q6ZQY7 126 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 Q6ZVQ6 151 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 LINC00482Q8N8I6 264 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 NOTCH4Q99466 2003 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 RETNLBQ9BQ08 111 aa4.11□□□□□ -1.75
CPSF2-201ENST00000298875 DEFB114Q30KQ6 69 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 NTM-AS1Q6ZSK4 140 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 EBI3Q14213 229 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 C10orf25Q5T742 122 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 C1orf229Q6ZS94 237 aaPredicted RBP4.1□□□□□ -1.75
CPSF2-201ENST00000298875 LOC100131303A0A0U1RQF7 123 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 SYCNQ0VAF6 134 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 Q6YL49 198 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 PIEZO1Q92508 2521 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 IGLV2-18A0A075B6J9 118 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 ZNF295-AS1Q8N0V1 137 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 TRBV6-4A0A1B0GX49 114 aa4.1□□□□□ -1.75
CPSF2-201ENST00000298875 WIPF1O43516 503 aa4.09□□□□□ -1.75
CPSF2-201ENST00000298875 Q8N6K4 173 aa4.09□□□□□ -1.75
CPSF2-201ENST00000298875 BBC3Q96PG8 261 aaPredicted RBP4.09□□□□□ -1.75
CPSF2-201ENST00000298875 TNFRSF13BO14836 293 aaPredicted RBP4.09□□□□□ -1.75
CPSF2-201ENST00000298875 CPAMD8Q8IZJ3 1885 aa4.09□□□□□ -1.75
CPSF2-201ENST00000298875 BRWD1-AS2P59051 145 aa4.09□□□□□ -1.75
CPSF2-201ENST00000298875 CRIP1P50238 77 aa4.09□□□□□ -1.75
CPSF2-201ENST00000298875 HCG22E2RYF7 251 aa4.09□□□□□ -1.76
CPSF2-201ENST00000298875 M0R2N4 97 aa4.09□□□□□ -1.76
CPSF2-201ENST00000298875 LINC00208Q96KT6 92 aa4.09□□□□□ -1.76
CPSF2-201ENST00000298875 ZNF73O43830 326 aaPredicted RBP4.08□□□□□ -1.76
CPSF2-201ENST00000298875 PKD1L2Q7Z442 2459 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 IGLV2-11P01706 119 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 NUPR2A6NF83 97 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 Q6ZPA2 131 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 TP53AIP1Q9HCN2 124 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 Q6ZS46 218 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 IGLV4-69A0A075B6H9 119 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 WISP2O76076 250 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 A0A1W2PNU3 283 aaPredicted RBP4.08□□□□□ -1.76
CPSF2-201ENST00000298875 BDP1A6H8Y1 2624 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 PRR9Q5T870 116 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 SETD2Q9BYW2 2564 aaPredicted RBP4.08□□□□□ -1.76
CPSF2-201ENST00000298875 TRAV10A0A0B4J240 114 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 C10orf99Q6UWK7 81 aa4.08□□□□□ -1.76
CPSF2-201ENST00000298875 C18orf65Q6ZTR6 163 aa4.07□□□□□ -1.76
CPSF2-201ENST00000298875 INAFM1C9JVW0 142 aa4.07□□□□□ -1.76
CPSF2-201ENST00000298875 PSPHP1O15172 72 aa4.07□□□□□ -1.76
CPSF2-201ENST00000298875 LRRK2Q5S007 2527 aa4.07□□□□□ -1.76
CPSF2-201ENST00000298875 X6R8D5 127 aa4.07□□□□□ -1.76
CPSF2-201ENST00000298875 ATP11AUNQ6ZP68 121 aa4.07□□□□□ -1.76
CPSF2-201ENST00000298875 C19orf84I3L1E1 186 aa4.07□□□□□ -1.76
CPSF2-201ENST00000298875 RNASE3P12724 160 aaKnown RBP4.07□□□□□ -1.76
CPSF2-201ENST00000298875 LINC00959A0A1B0GUT2 108 aa4.07□□□□□ -1.76
CPSF2-201ENST00000298875 ADAMTS20P59510 1910 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 IGHV6-1A0A0B4J1U7 121 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 REG3GQ6UW15 175 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 DSCAMO60469 2012 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 A0A087WYN8 130 aa4.06□□□□□ -1.76
CPSF2-201ENST00000298875 CIRBP-AS1Q8TBR5 109 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms