RNA–Protein interactions for RNA: ENST00000298564.14

TSPAN17-201, Transcript of tetraspanin 17, humanhuman

TSL 2 BASIC

Gene TSPAN17, Length 2,810 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN17-201ENST00000298564 LINC00242Q5T6M2 205 aa12.72□□□□□ -0.37
TSPAN17-201ENST00000298564 PRIMA1Q86XR5 153 aa12.72□□□□□ -0.37
TSPAN17-201ENST00000298564 SPANXA1Q9NS26 97 aa12.72□□□□□ -0.37
TSPAN17-201ENST00000298564 PDZD2O15018 2839 aa12.72□□□□□ -0.37
TSPAN17-201ENST00000298564 MTORP42345 2549 aa12.71□□□□□ -0.37
TSPAN17-201ENST00000298564 TRAV25A0A0B4J276 109 aa12.71□□□□□ -0.37
TSPAN17-201ENST00000298564 NDUFA1O15239 70 aa12.71□□□□□ -0.37
TSPAN17-201ENST00000298564 BEAN1Q3B7T3 259 aa12.71□□□□□ -0.37
TSPAN17-201ENST00000298564 C1orf158Q8N1D5 194 aa12.71□□□□□ -0.37
TSPAN17-201ENST00000298564 BAALC-AS2P0C853 105 aa12.7□□□□□ -0.38
TSPAN17-201ENST00000298564 KRTAP1-1Q07627 177 aa12.7□□□□□ -0.38
TSPAN17-201ENST00000298564 LINC01600Q96MT4 127 aa12.7□□□□□ -0.38
TSPAN17-201ENST00000298564 LINC01006Q8NI28 216 aa12.7□□□□□ -0.38
TSPAN17-201ENST00000298564 KLK5Q9Y337 293 aaPredicted RBP12.7□□□□□ -0.38
TSPAN17-201ENST00000298564 GAGE2AQ6NT46 116 aa12.69□□□□□ -0.38
TSPAN17-201ENST00000298564 COX7A2LO14548 114 aa12.68□□□□□ -0.38
TSPAN17-201ENST00000298564 TRGV1A0A0A0MS02 117 aa12.67□□□□□ -0.38
TSPAN17-201ENST00000298564 SMIM1B2RUZ4 78 aa12.67□□□□□ -0.38
TSPAN17-201ENST00000298564 DEFB121Q5J5C9 76 aa12.67□□□□□ -0.38
TSPAN17-201ENST00000298564 TOMM7Q9P0U1 55 aa12.67□□□□□ -0.38
TSPAN17-201ENST00000298564 FN1P02751 2386 aaKnown RBP12.67□□□□□ -0.38
TSPAN17-201ENST00000298564 ITPR2Q14571 2701 aa12.67□□□□□ -0.38
TSPAN17-201ENST00000298564 C9orf129Q5T035 196 aaKnown RBP12.66□□□□□ -0.38
TSPAN17-201ENST00000298564 SETXQ7Z333 2677 aaKnown RBP12.66□□□□□ -0.38
TSPAN17-201ENST00000298564 NBEAL2Q6ZNJ1 2754 aa12.66□□□□□ -0.38
TSPAN17-201ENST00000298564 FAM240AA0A1B0GVK7 77 aa12.66□□□□□ -0.38
TSPAN17-201ENST00000298564 DNAJC30Q96LL9 226 aa12.66□□□□□ -0.38
TSPAN17-201ENST00000298564 TIRAPP58753 221 aa12.66□□□□□ -0.38
TSPAN17-201ENST00000298564 PPDPFQ9H3Y8 114 aa12.66□□□□□ -0.38
TSPAN17-201ENST00000298564 C22orf24Q9Y442 160 aa12.66□□□□□ -0.38
TSPAN17-201ENST00000298564 TRBV7-7A0A0K0K1E9 115 aa12.65□□□□□ -0.38
TSPAN17-201ENST00000298564 FAM110AQ9BQ89 295 aa12.65□□□□□ -0.38
TSPAN17-201ENST00000298564 NTM-AS1Q6ZSK4 140 aa12.65□□□□□ -0.38
TSPAN17-201ENST00000298564 WFDC10AQ9H1F0 79 aa12.64□□□□□ -0.39
TSPAN17-201ENST00000298564 RNASE1P07998 156 aaKnown RBP12.63□□□□□ -0.39
TSPAN17-201ENST00000298564 Q6ZTI0 123 aa12.63□□□□□ -0.39
TSPAN17-201ENST00000298564 TIMM17BO60830 172 aa12.63□□□□□ -0.39
TSPAN17-201ENST00000298564 ATP5G1P05496 136 aa12.63□□□□□ -0.39
TSPAN17-201ENST00000298564 C9orf153Q5TBE3 101 aa12.63□□□□□ -0.39
TSPAN17-201ENST00000298564 IL17DQ8TAD2 202 aa12.63□□□□□ -0.39
TSPAN17-201ENST00000298564 LOC107984640A0A0U1RRK4 108 aa12.62□□□□□ -0.39
TSPAN17-201ENST00000298564 HERVK_113P63121 156 aa12.62□□□□□ -0.39
TSPAN17-201ENST00000298564 ANK3Q12955 4377 aaKnown RBP12.62□□□□□ -0.39
TSPAN17-201ENST00000298564 IGLV5-39A0A0G2JS06 123 aa12.61□□□□□ -0.39
TSPAN17-201ENST00000298564 C16orf95Q9H693 158 aa12.61□□□□□ -0.39
TSPAN17-201ENST00000298564 IGLV5-45A0A087WSX0 123 aa12.61□□□□□ -0.39
TSPAN17-201ENST00000298564 PLA2G2AP14555 144 aa12.61□□□□□ -0.39
TSPAN17-201ENST00000298564 MRPL23Q16540 153 aaKnown RBP12.61□□□□□ -0.39
TSPAN17-201ENST00000298564 GIG44P09565 113 aaPredicted RBP12.61□□□□□ -0.39
TSPAN17-201ENST00000298564 SDIM1Q6ZPB5 146 aa12.61□□□□□ -0.39
TSPAN17-201ENST00000298564 NOP10Q9NPE3 64 aaKnown RBP12.6□□□□□ -0.39
TSPAN17-201ENST00000298564 LOC100131303A0A0U1RQF7 123 aa12.6□□□□□ -0.39
TSPAN17-201ENST00000298564 RPL35AP18077 110 aaKnown RBP12.6□□□□□ -0.39
TSPAN17-201ENST00000298564 C11orf68Q9H3H3 251 aaKnown RBP12.6□□□□□ -0.39
TSPAN17-201ENST00000298564 LINC00337Q8N6G1 96 aa12.59□□□□□ -0.39
TSPAN17-201ENST00000298564 C14orf132Q9NPU4 83 aa12.59□□□□□ -0.39
TSPAN17-201ENST00000298564 A0A087WYN8 130 aa12.59□□□□□ -0.39
TSPAN17-201ENST00000298564 IGKV3D-7A0A0C4DH55 119 aa12.59□□□□□ -0.39
TSPAN17-201ENST00000298564 MIR7-3HGQ8N6C7 128 aa12.59□□□□□ -0.39
TSPAN17-201ENST00000298564 SLPIP03973 132 aa12.58□□□□□ -0.4
TSPAN17-201ENST00000298564 J3QKU1 62 aa12.57□□□□□ -0.4
TSPAN17-201ENST00000298564 LINC00643Q86TS7 51 aa12.57□□□□□ -0.4
TSPAN17-201ENST00000298564 HELZ2Q9BYK8 2649 aaKnown RBP12.57□□□□□ -0.4
TSPAN17-201ENST00000298564 IGLV1-51P01701 117 aa12.57□□□□□ -0.4
TSPAN17-201ENST00000298564 PFN2P35080 140 aa12.57□□□□□ -0.4
TSPAN17-201ENST00000298564 SMR3AQ99954 134 aa12.57□□□□□ -0.4
TSPAN17-201ENST00000298564 F5H768 121 aa12.57□□□□□ -0.4
TSPAN17-201ENST00000298564 K7EQD1 137 aa12.57□□□□□ -0.4
TSPAN17-201ENST00000298564 RPL36AP83881 106 aaKnown RBP12.56□□□□□ -0.4
TSPAN17-201ENST00000298564 RPL36ALQ969Q0 106 aaKnown RBP12.56□□□□□ -0.4
TSPAN17-201ENST00000298564 C19orf73Q9NVV2 129 aa12.56□□□□□ -0.4
TSPAN17-201ENST00000298564 A0A087WVE0 104 aa12.55□□□□□ -0.4
TSPAN17-201ENST00000298564 LINC00158P58513 81 aa12.55□□□□□ -0.4
TSPAN17-201ENST00000298564 CDC42SE2Q9NRR3 84 aa12.55□□□□□ -0.4
TSPAN17-201ENST00000298564 IGKV2-28A0A075B6P5 120 aa12.55□□□□□ -0.4
TSPAN17-201ENST00000298564 IGKV2D-28P01615 120 aa12.55□□□□□ -0.4
TSPAN17-201ENST00000298564 MALP21145 153 aa12.55□□□□□ -0.4
TSPAN17-201ENST00000298564 CYSTM1Q9H1C7 97 aa12.55□□□□□ -0.4
TSPAN17-201ENST00000298564 ACYP1P07311 99 aa12.54□□□□□ -0.4
TSPAN17-201ENST00000298564 CMC4P56277 68 aaPredicted RBP12.54□□□□□ -0.4
TSPAN17-201ENST00000298564 C3orf22Q8N5N4 141 aa12.54□□□□□ -0.4
TSPAN17-201ENST00000298564 HILS1P60008 231 aa12.54□□□□□ -0.4
TSPAN17-201ENST00000298564 SND1-IT1Q9HBX3 110 aa12.54□□□□□ -0.4
TSPAN17-201ENST00000298564 UNC79Q9P2D8 2635 aa12.54□□□□□ -0.4
TSPAN17-201ENST00000298564 TRBV10-1A0A0K0K1A3 114 aa12.53□□□□□ -0.4
TSPAN17-201ENST00000298564 PLAC8L1A1L4L8 177 aa12.53□□□□□ -0.4
TSPAN17-201ENST00000298564 TRACP01848 142 aa12.53□□□□□ -0.4
TSPAN17-201ENST00000298564 CRPP02741 224 aa12.53□□□□□ -0.4
TSPAN17-201ENST00000298564 SMIM11BQ8TCY0 68 aa12.53□□□□□ -0.4
TSPAN17-201ENST00000298564 GCN1Q92616 2671 aaKnown RBP12.53□□□□□ -0.4
TSPAN17-201ENST00000298564 UBE2L6O14933 153 aa12.52□□□□□ -0.4
TSPAN17-201ENST00000298564 OR13C6PQ8NH95 151 aa12.52□□□□□ -0.4
TSPAN17-201ENST00000298564 TRGV2A0A075B6R0 118 aa12.52□□□□□ -0.41
TSPAN17-201ENST00000298564 NCR3O14931 201 aa12.52□□□□□ -0.41
TSPAN17-201ENST00000298564 C5orf38Q86SI9 138 aa12.51□□□□□ -0.41
TSPAN17-201ENST00000298564 C16orf74Q96GX8 76 aa12.51□□□□□ -0.41
TSPAN17-201ENST00000298564 hADV29S1A0JD25 119 aa12.51□□□□□ -0.41
TSPAN17-201ENST00000298564 DNAL4O96015 105 aa12.51□□□□□ -0.41
TSPAN17-201ENST00000298564 CSNK1G2-AS1Q8NCQ2 148 aa12.51□□□□□ -0.41
TSPAN17-201ENST00000298564 LECT2O14960 151 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms