RNA–Protein interactions for RNA: ENST00000291552.8

U2AF1-201, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene U2AF1, Length 962 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-201ENST00000291552 SPINK6Q6UWN8 80 aa15.6■□□□□ 0.09
U2AF1-201ENST00000291552 SMDT1Q9H4I9 107 aa15.6■□□□□ 0.09
U2AF1-201ENST00000291552 Q6ZRP5 223 aa15.59■□□□□ 0.09
U2AF1-201ENST00000291552 SPANXA1Q9NS26 97 aa15.59■□□□□ 0.09
U2AF1-201ENST00000291552 A0A0J9YXV3 536 aa15.58■□□□□ 0.08
U2AF1-201ENST00000291552 TCAPO15273 167 aa15.58■□□□□ 0.08
U2AF1-201ENST00000291552 IGHV3OR16-9A0A0B4J2B5 98 aa15.57■□□□□ 0.08
U2AF1-201ENST00000291552 F8W036 122 aa15.56■□□□□ 0.08
U2AF1-201ENST00000291552 S100A8P05109 93 aa15.56■□□□□ 0.08
U2AF1-201ENST00000291552 MRPS36P82909 103 aaKnown RBP15.56■□□□□ 0.08
U2AF1-201ENST00000291552 RPL18AQ02543 176 aaKnown RBP15.56■□□□□ 0.08
U2AF1-201ENST00000291552 C9orf116Q5BN46 136 aaPredicted RBP15.56■□□□□ 0.08
U2AF1-201ENST00000291552 OR10D4PQ8NGN7 298 aa15.56■□□□□ 0.08
U2AF1-201ENST00000291552 KRTAP10-8P60410 259 aa15.55■□□□□ 0.08
U2AF1-201ENST00000291552 RNF151Q2KHN1 245 aa15.54■□□□□ 0.08
U2AF1-201ENST00000291552 ORAOV1Q8WV07 137 aa15.54■□□□□ 0.08
U2AF1-201ENST00000291552 IFITM10A6NMD0 228 aa15.53■□□□□ 0.08
U2AF1-201ENST00000291552 PPBPP02775 128 aa15.53■□□□□ 0.08
U2AF1-201ENST00000291552 RNF213Q63HN8 5207 aa15.52■□□□□ 0.08
U2AF1-201ENST00000291552 C10orf25Q5T742 122 aa15.52■□□□□ 0.08
U2AF1-201ENST00000291552 REG3GQ6UW15 175 aa15.52■□□□□ 0.08
U2AF1-201ENST00000291552 PHF5AQ7RTV0 110 aaKnown RBP15.51■□□□□ 0.07
U2AF1-201ENST00000291552 ORMDL3Q8N138 153 aa15.51■□□□□ 0.07
U2AF1-201ENST00000291552 MRPL35Q9NZE8 188 aaKnown RBP15.51■□□□□ 0.07
U2AF1-201ENST00000291552 PSORS1C2Q9UIG4 136 aa15.51■□□□□ 0.07
U2AF1-201ENST00000291552 ATP5L2Q7Z4Y8 100 aa15.5■□□□□ 0.07
U2AF1-201ENST00000291552 PRELID3AQ96N28 172 aa15.5■□□□□ 0.07
U2AF1-201ENST00000291552 TMEM136Q6ZRR5 245 aa15.49■□□□□ 0.07
U2AF1-201ENST00000291552 IGLV4-3A0A075B6K6 122 aa15.47■□□□□ 0.07
U2AF1-201ENST00000291552 UNQ6190/PRO20217Q6UXQ8 127 aa15.47■□□□□ 0.07
U2AF1-201ENST00000291552 C6orf48Q9UBA6 75 aa15.47■□□□□ 0.07
U2AF1-201ENST00000291552 F8WDY8 70 aa15.46■□□□□ 0.07
U2AF1-201ENST00000291552 NDUFA1O15239 70 aa15.46■□□□□ 0.07
U2AF1-201ENST00000291552 PYGO1Q9Y3Y4 419 aa15.46■□□□□ 0.07
U2AF1-201ENST00000291552 FAM168BA1KXE4 195 aa15.45■□□□□ 0.06
U2AF1-201ENST00000291552 MT-ND6P03923 174 aa15.45■□□□□ 0.06
U2AF1-201ENST00000291552 KIAA0087Q14695 138 aa15.45■□□□□ 0.06
U2AF1-201ENST00000291552 LINC00242Q5T6M2 205 aa15.45■□□□□ 0.06
U2AF1-201ENST00000291552 A0A087WZ39 114 aa15.44■□□□□ 0.06
U2AF1-201ENST00000291552 PRSS47A8MTI9 375 aa15.44■□□□□ 0.06
U2AF1-201ENST00000291552 RAB5AP20339 215 aa15.44■□□□□ 0.06
U2AF1-201ENST00000291552 IFI27P40305 119 aaPredicted RBP15.44■□□□□ 0.06
U2AF1-201ENST00000291552 KRTAP11-1Q8IUC1 163 aa15.44■□□□□ 0.06
U2AF1-201ENST00000291552 TGIF2-C20orf24A0A0A6YYL0 155 aa15.43■□□□□ 0.06
U2AF1-201ENST00000291552 TLX1NBP0CAT3 122 aa15.43■□□□□ 0.06
U2AF1-201ENST00000291552 IMMP2LQ96T52 175 aa15.42■□□□□ 0.06
U2AF1-201ENST00000291552 LOC389332A0A1B0GUA5 103 aa15.41■□□□□ 0.06
U2AF1-201ENST00000291552 C1orf137Q5JT78 98 aa15.41■□□□□ 0.06
U2AF1-201ENST00000291552 KRTAP7-1Q8IUC3 87 aa15.41■□□□□ 0.06
U2AF1-201ENST00000291552 TMEM141Q96I45 108 aa15.41■□□□□ 0.06
U2AF1-201ENST00000291552 ZC2HC1BQ5TFG8 222 aa15.4■□□□□ 0.06
U2AF1-201ENST00000291552 LINC00173Q6ZV60 143 aa15.4■□□□□ 0.06
U2AF1-201ENST00000291552 LAMTOR2Q9Y2Q5 125 aa15.4■□□□□ 0.06
U2AF1-201ENST00000291552 MAP1LC3AQ9H492 121 aa15.39■□□□□ 0.05
U2AF1-201ENST00000291552 UBE2D1P51668 147 aa15.38■□□□□ 0.05
U2AF1-201ENST00000291552 FAM19A5Q7Z5A7 132 aaPredicted RBP15.38■□□□□ 0.05
U2AF1-201ENST00000291552 PNRC1Q12796 327 aaPredicted RBP15.37■□□□□ 0.05
U2AF1-201ENST00000291552 C2orf82Q6UX34 121 aa15.37■□□□□ 0.05
U2AF1-201ENST00000291552 Q8N8P6 123 aa15.37■□□□□ 0.05
U2AF1-201ENST00000291552 GAGE2EQ4V326 116 aa15.36■□□□□ 0.05
U2AF1-201ENST00000291552 C2orf66Q6UXQ4 117 aa15.36■□□□□ 0.05
U2AF1-201ENST00000291552 TEX43Q6ZNM6 134 aa15.36■□□□□ 0.05
U2AF1-201ENST00000291552 ANAPC16Q96DE5 110 aa15.36■□□□□ 0.05
U2AF1-201ENST00000291552 GAGE2DQ9UEU5 116 aa15.36■□□□□ 0.05
U2AF1-201ENST00000291552 IGLV7-43P04211 117 aa15.35■□□□□ 0.05
U2AF1-201ENST00000291552 AMELXQ99217 191 aa15.35■□□□□ 0.05
U2AF1-201ENST00000291552 CYSLTR1Q9Y271 337 aa15.35■□□□□ 0.05
U2AF1-201ENST00000291552 MT-ND4LP03901 98 aa15.34■□□□□ 0.05
U2AF1-201ENST00000291552 TRBV30A0A0K0K1B3 111 aa15.32■□□□□ 0.04
U2AF1-201ENST00000291552 LINC01561Q8N1V8 128 aa15.32■□□□□ 0.04
U2AF1-201ENST00000291552 C9orf129Q5T035 196 aaKnown RBP15.31■□□□□ 0.04
U2AF1-201ENST00000291552 IGIPA6NJ69 53 aa15.3■□□□□ 0.04
U2AF1-201ENST00000291552 C2orf88Q9BSF0 95 aa15.3■□□□□ 0.04
U2AF1-201ENST00000291552 NDUFC2-KCTD14E9PQ53 114 aa15.29■□□□□ 0.04
U2AF1-201ENST00000291552 M0QXV9 152 aa15.29■□□□□ 0.04
U2AF1-201ENST00000291552 ORMDL2Q53FV1 153 aa15.29■□□□□ 0.04
U2AF1-201ENST00000291552 Q6ZN92 141 aa15.28■□□□□ 0.04
U2AF1-201ENST00000291552 FAM19A3Q7Z5A8 133 aa15.28■□□□□ 0.04
U2AF1-201ENST00000291552 DIRC1Q969H9 104 aa15.28■□□□□ 0.04
U2AF1-201ENST00000291552 LPAP08519 4548 aa15.28■□□□□ 0.04
U2AF1-201ENST00000291552 H0Y9J4 135 aa15.27■□□□□ 0.04
U2AF1-201ENST00000291552 PRR26Q8N8Z3 221 aa15.27■□□□□ 0.04
U2AF1-201ENST00000291552 VCX2Q9H322 139 aa15.27■□□□□ 0.04
U2AF1-201ENST00000291552 NPSP0C0P6 89 aa15.26■□□□□ 0.03
U2AF1-201ENST00000291552 K7EMI3 77 aa15.25■□□□□ 0.03
U2AF1-201ENST00000291552 PACRGQ96M98 296 aaPredicted RBP15.25■□□□□ 0.03
U2AF1-201ENST00000291552 ADCYAP1P18509 176 aa15.24■□□□□ 0.03
U2AF1-201ENST00000291552 RAB14P61106 215 aa15.24■□□□□ 0.03
U2AF1-201ENST00000291552 NXT2Q9NPJ8 142 aaKnown RBP15.24■□□□□ 0.03
U2AF1-201ENST00000291552 KRTAP1-4P0C5Y4 121 aa15.23■□□□□ 0.03
U2AF1-201ENST00000291552 CTDSP1Q9GZU7 261 aa15.23■□□□□ 0.03
U2AF1-201ENST00000291552 TOMM7Q9P0U1 55 aa15.23■□□□□ 0.03
U2AF1-201ENST00000291552 UBE2BP63146 152 aa15.22■□□□□ 0.03
U2AF1-201ENST00000291552 KIAA1644Q3SXP7 199 aa15.22■□□□□ 0.03
U2AF1-201ENST00000291552 Q8IZM0 81 aa15.22■□□□□ 0.03
U2AF1-201ENST00000291552 CDKN2A-AS1Q9UH64 79 aa15.21■□□□□ 0.03
U2AF1-201ENST00000291552 PRSS2P07478 247 aa15.2■□□□□ 0.02
U2AF1-201ENST00000291552 CLLU1Q5K131 121 aa15.2■□□□□ 0.02
U2AF1-201ENST00000291552 TOMM6Q96B49 74 aa15.2■□□□□ 0.02
U2AF1-201ENST00000291552 TIMM17AQ99595 171 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms