RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 RPL39LQ96EH5 51 aaKnown RBP6.13□□□□□ -1.43
HMHB1-201ENST00000289448 HSPB8Q9UJY1 196 aa6.13□□□□□ -1.43
HMHB1-201ENST00000289448 K7EMI3 77 aa6.12□□□□□ -1.43
HMHB1-201ENST00000289448 LEPROTL1O95214 131 aa6.12□□□□□ -1.43
HMHB1-201ENST00000289448 SCGB1D1O95968 90 aa6.12□□□□□ -1.43
HMHB1-201ENST00000289448 HBDP02042 147 aa6.12□□□□□ -1.43
HMHB1-201ENST00000289448 KRTDAPP60985 99 aa6.12□□□□□ -1.43
HMHB1-201ENST00000289448 COTL1Q14019 142 aa6.12□□□□□ -1.43
HMHB1-201ENST00000289448 PMCHL1Q16048 86 aa6.12□□□□□ -1.43
HMHB1-201ENST00000289448 SMIM2Q9BVW6 85 aa6.12□□□□□ -1.43
HMHB1-201ENST00000289448 TRAV8-4A0A0B4J246 113 aa6.11□□□□□ -1.43
HMHB1-201ENST00000289448 TRBV6-5A0A0K0K1A5 114 aa6.11□□□□□ -1.43
HMHB1-201ENST00000289448 C3orf79P0CE67 100 aa6.11□□□□□ -1.43
HMHB1-201ENST00000289448 FCER1GP30273 86 aa6.11□□□□□ -1.43
HMHB1-201ENST00000289448 S100A12P80511 92 aa6.11□□□□□ -1.43
HMHB1-201ENST00000289448 ST20Q9HBF5 79 aa6.11□□□□□ -1.43
HMHB1-201ENST00000289448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.1□□□□□ -1.43
HMHB1-201ENST00000289448 A0A096LNJ9 63 aa6.1□□□□□ -1.43
HMHB1-201ENST00000289448 hDV102S1A0JD36 115 aa6.1□□□□□ -1.43
HMHB1-201ENST00000289448 IGKV2-29A2NJV5 120 aaPredicted RBP6.1□□□□□ -1.43
HMHB1-201ENST00000289448 UBE2L6O14933 153 aa6.1□□□□□ -1.43
HMHB1-201ENST00000289448 HNRNPA3P51991 378 aaKnown RBP6.1□□□□□ -1.43
HMHB1-201ENST00000289448 CNBPP62633 177 aaKnown RBP6.1□□□□□ -1.43
HMHB1-201ENST00000289448 MAP1LC3CQ9BXW4 147 aa6.1□□□□□ -1.43
HMHB1-201ENST00000289448 IGKV3OR2-268A0A0C4DH90 116 aa6.09□□□□□ -1.43
HMHB1-201ENST00000289448 C20orf202A1L168 122 aa6.09□□□□□ -1.43
HMHB1-201ENST00000289448 GAGE12HA6NDE8 117 aa6.09□□□□□ -1.43
HMHB1-201ENST00000289448 SYS1-DBNDD2H3BUS1 97 aa6.09□□□□□ -1.43
HMHB1-201ENST00000289448 VCYO14598 125 aa6.09□□□□□ -1.43
HMHB1-201ENST00000289448 RPL37AP61513 92 aaKnown RBP6.09□□□□□ -1.43
HMHB1-201ENST00000289448 CIRBPQ14011 172 aaKnown RBP6.09□□□□□ -1.43
HMHB1-201ENST00000289448 ORMDL2Q53FV1 153 aa6.09□□□□□ -1.43
HMHB1-201ENST00000289448 PET117Q6UWS5 81 aa6.09□□□□□ -1.43
HMHB1-201ENST00000289448 C15orf56Q8N910 161 aa6.09□□□□□ -1.43
HMHB1-201ENST00000289448 SDHAF1A6NFY7 115 aa6.08□□□□□ -1.44
HMHB1-201ENST00000289448 CHTF8P0CG12 524 aa6.08□□□□□ -1.44
HMHB1-201ENST00000289448 G0S2P27469 103 aa6.08□□□□□ -1.44
HMHB1-201ENST00000289448 POLR2KP53803 58 aaKnown RBP6.08□□□□□ -1.44
HMHB1-201ENST00000289448 TEX43Q6ZNM6 134 aa6.08□□□□□ -1.44
HMHB1-201ENST00000289448 LINC00173Q6ZV60 143 aa6.08□□□□□ -1.44
HMHB1-201ENST00000289448 TRBV27A0A0K0K1C4 114 aa6.07□□□□□ -1.44
HMHB1-201ENST00000289448 LINC01549A6NIU2 74 aa6.07□□□□□ -1.44
HMHB1-201ENST00000289448 TCAPO15273 167 aa6.07□□□□□ -1.44
HMHB1-201ENST00000289448 ATP5LO75964 103 aa6.07□□□□□ -1.44
HMHB1-201ENST00000289448 FGF6P10767 208 aa6.07□□□□□ -1.44
HMHB1-201ENST00000289448 CHCHD10Q8WYQ3 142 aaPredicted RBP6.07□□□□□ -1.44
HMHB1-201ENST00000289448 IFI27L1Q96BM0 104 aa6.07□□□□□ -1.44
HMHB1-201ENST00000289448 KIR2DL4Q99706 377 aa6.07□□□□□ -1.44
HMHB1-201ENST00000289448 UBR4Q5T4S7 5183 aa6.06□□□□□ -1.44
HMHB1-201ENST00000289448 IGHV3-64A0A075B6Q5 118 aa6.06□□□□□ -1.44
HMHB1-201ENST00000289448 TSHBP01222 138 aa6.06□□□□□ -1.44
HMHB1-201ENST00000289448 HIGD2BQ4VC39 106 aa6.06□□□□□ -1.44
HMHB1-201ENST00000289448 LINC01545Q5VT33 79 aa6.06□□□□□ -1.44
HMHB1-201ENST00000289448 AMMECR1LQ6DCA0 310 aa6.06□□□□□ -1.44
HMHB1-201ENST00000289448 A0A087WYN8 130 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 TSTD3H0UI37 97 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 H7C423 109 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 I3L3M4 83 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 OXTP01178 125 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 FOXI1Q12951 378 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 SPACA4Q8TDM5 124 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 TOMM6Q96B49 74 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 VAMP8Q9BV40 100 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 CYSLTR1Q9Y271 337 aa6.05□□□□□ -1.44
HMHB1-201ENST00000289448 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.04□□□□□ -1.44
HMHB1-201ENST00000289448 PCP4L1A6NKN8 68 aa6.04□□□□□ -1.44
HMHB1-201ENST00000289448 COX6A2Q02221 97 aa6.04□□□□□ -1.44
HMHB1-201ENST00000289448 CFAP161Q6P656 301 aa6.04□□□□□ -1.44
HMHB1-201ENST00000289448 C2orf66Q6UXQ4 117 aa6.04□□□□□ -1.44
HMHB1-201ENST00000289448 OR5A1Q8NGJ0 315 aa6.04□□□□□ -1.44
HMHB1-201ENST00000289448 GVQW2A0A096LPI5 108 aaPredicted RBP6.03□□□□□ -1.44
HMHB1-201ENST00000289448 LINC00959A0A1B0GUT2 108 aa6.03□□□□□ -1.44
HMHB1-201ENST00000289448 H0Y8G0 127 aa6.03□□□□□ -1.44
HMHB1-201ENST00000289448 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.03□□□□□ -1.44
HMHB1-201ENST00000289448 ZNF25P17030 456 aaPredicted RBP6.03□□□□□ -1.44
HMHB1-201ENST00000289448 XCL1P47992 114 aa6.03□□□□□ -1.44
HMHB1-201ENST00000289448 ZNF664Q8N3J9 261 aa6.03□□□□□ -1.44
HMHB1-201ENST00000289448 DPH3Q96FX2 82 aa6.03□□□□□ -1.44
HMHB1-201ENST00000289448 SCGB3A1Q96QR1 104 aa6.03□□□□□ -1.44
HMHB1-201ENST00000289448 PLAC8Q9NZF1 115 aa6.03□□□□□ -1.44
HMHB1-201ENST00000289448 TNXBP22105 4242 aa6.03□□□□□ -1.44
HMHB1-201ENST00000289448 HSBP1L1C9JCN9 74 aa6.02□□□□□ -1.45
HMHB1-201ENST00000289448 CCL25O15444 150 aa6.02□□□□□ -1.45
HMHB1-201ENST00000289448 ERASQ7Z444 233 aa6.02□□□□□ -1.45
HMHB1-201ENST00000289448 MRPL52Q86TS9 123 aaKnown RBP6.02□□□□□ -1.45
HMHB1-201ENST00000289448 LINC00526Q96FQ7 95 aa6.02□□□□□ -1.45
HMHB1-201ENST00000289448 TMEM101Q96IK0 257 aa6.02□□□□□ -1.45
HMHB1-201ENST00000289448 CDC42SE2Q9NRR3 84 aa6.02□□□□□ -1.45
HMHB1-201ENST00000289448 TRAV12-1A0A0B4J245 112 aa6.01□□□□□ -1.45
HMHB1-201ENST00000289448 MT1HL1P0DM35 61 aa6.01□□□□□ -1.45
HMHB1-201ENST00000289448 SPATA45Q537H7 98 aa6.01□□□□□ -1.45
HMHB1-201ENST00000289448 Q6ZN92 141 aa6.01□□□□□ -1.45
HMHB1-201ENST00000289448 ATOH7Q8N100 152 aa6.01□□□□□ -1.45
HMHB1-201ENST00000289448 TMEM141Q96I45 108 aa6.01□□□□□ -1.45
HMHB1-201ENST00000289448 TIMM17AQ99595 171 aa6.01□□□□□ -1.45
HMHB1-201ENST00000289448 PRO1933Q9H354 126 aa6.01□□□□□ -1.45
HMHB1-201ENST00000289448 PAM16Q9Y3D7 125 aa6.01□□□□□ -1.45
HMHB1-201ENST00000289448 IGKV2-24A0A0C4DH68 120 aa6□□□□□ -1.45
HMHB1-201ENST00000289448 IGIPA6NJ69 53 aa6□□□□□ -1.45
HMHB1-201ENST00000289448 ODF1Q14990 250 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms