RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 IGLV4-69A0A075B6H9 119 aa6.52□□□□□ -1.37
NIPBL-201ENST00000282516 NRACQ8N912 160 aa6.52□□□□□ -1.37
NIPBL-201ENST00000282516 IGLV1-47P01700 117 aa6.52□□□□□ -1.37
NIPBL-201ENST00000282516 RPL28P46779 137 aaKnown RBP6.52□□□□□ -1.37
NIPBL-201ENST00000282516 PYGO1Q9Y3Y4 419 aa6.52□□□□□ -1.37
NIPBL-201ENST00000282516 CSDC2Q9Y534 153 aaKnown RBP6.52□□□□□ -1.37
NIPBL-201ENST00000282516 X6R8D5 127 aa6.52□□□□□ -1.37
NIPBL-201ENST00000282516 EBI3Q14213 229 aa6.51□□□□□ -1.37
NIPBL-201ENST00000282516 Q8N7P7 452 aa6.51□□□□□ -1.37
NIPBL-201ENST00000282516 TP53TG3Q9ULZ0 132 aa6.51□□□□□ -1.37
NIPBL-201ENST00000282516 LOC100131303A0A0U1RQF7 123 aa6.51□□□□□ -1.37
NIPBL-201ENST00000282516 LINC00694P0DN24 101 aa6.51□□□□□ -1.37
NIPBL-201ENST00000282516 Q6Q795 121 aa6.51□□□□□ -1.37
NIPBL-201ENST00000282516 ODF3BA8MYP8 253 aa6.5□□□□□ -1.37
NIPBL-201ENST00000282516 K7EQG2 157 aa6.5□□□□□ -1.37
NIPBL-201ENST00000282516 TNFRSF13BO14836 293 aaPredicted RBP6.5□□□□□ -1.37
NIPBL-201ENST00000282516 Q8N976 141 aa6.5□□□□□ -1.37
NIPBL-201ENST00000282516 DEFB114Q30KQ6 69 aa6.5□□□□□ -1.37
NIPBL-201ENST00000282516 CELA1Q9UNI1 258 aa6.5□□□□□ -1.37
NIPBL-201ENST00000282516 LELP1Q5T871 98 aa6.49□□□□□ -1.37
NIPBL-201ENST00000282516 ZNF80P51504 273 aaPredicted RBP6.49□□□□□ -1.37
NIPBL-201ENST00000282516 ZNF524Q96C55 264 aa6.49□□□□□ -1.37
NIPBL-201ENST00000282516 IGLV2-14P01704 120 aa6.49□□□□□ -1.37
NIPBL-201ENST00000282516 SERTAD4-AS1Q5TG53 156 aa6.49□□□□□ -1.37
NIPBL-201ENST00000282516 IGFL2Q6UWQ7 119 aa6.49□□□□□ -1.37
NIPBL-201ENST00000282516 RPL37AP8A6NKH3 93 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 VPREB1P12018 145 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 RBX1P62877 108 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 ADORA2A-AS1P86434 159 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 IGHV6-1A0A0B4J1U7 121 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 FRMD6-AS1P0C7T7 363 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 NTM-AS1Q6ZSK4 140 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 KPRPQ5T749 579 aaPredicted RBP6.48□□□□□ -1.37
NIPBL-201ENST00000282516 SMIM11BQ8TCY0 68 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 NRGNQ92686 78 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 GDF5OSQ5U4N7 250 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 Q8IZM0 81 aa6.48□□□□□ -1.37
NIPBL-201ENST00000282516 ZNF843Q8N446 348 aa6.47□□□□□ -1.37
NIPBL-201ENST00000282516 LINC00208Q96KT6 92 aa6.47□□□□□ -1.37
NIPBL-201ENST00000282516 PSPHP1O15172 72 aa6.47□□□□□ -1.37
NIPBL-201ENST00000282516 TSHBP01222 138 aa6.47□□□□□ -1.37
NIPBL-201ENST00000282516 C1orf137Q5JT78 98 aa6.47□□□□□ -1.37
NIPBL-201ENST00000282516 M0QXV9 152 aa6.47□□□□□ -1.37
NIPBL-201ENST00000282516 PLA2G2EQ9NZK7 142 aa6.47□□□□□ -1.37
NIPBL-201ENST00000282516 IGF1P05019 195 aa6.46□□□□□ -1.37
NIPBL-201ENST00000282516 P0C879 139 aa6.46□□□□□ -1.37
NIPBL-201ENST00000282516 Q6ZSR3 168 aa6.46□□□□□ -1.37
NIPBL-201ENST00000282516 LINC00574Q9H8X3 128 aa6.46□□□□□ -1.37
NIPBL-201ENST00000282516 IGLV2-8P01709 118 aa6.46□□□□□ -1.37
NIPBL-201ENST00000282516 REG3GQ6UW15 175 aa6.46□□□□□ -1.37
NIPBL-201ENST00000282516 POM121L12Q8N7R1 296 aa6.46□□□□□ -1.38
NIPBL-201ENST00000282516 E7EUB6 86 aa6.46□□□□□ -1.38
NIPBL-201ENST00000282516 SOSTDC1Q6X4U4 206 aa6.46□□□□□ -1.38
NIPBL-201ENST00000282516 LINC00526Q96FQ7 95 aa6.46□□□□□ -1.38
NIPBL-201ENST00000282516 CIRBP-AS1Q8TBR5 109 aa6.46□□□□□ -1.38
NIPBL-201ENST00000282516 Q6YL49 198 aa6.46□□□□□ -1.38
NIPBL-201ENST00000282516 MAPKAPK5-AS1Q8N8E1 139 aa6.45□□□□□ -1.38
NIPBL-201ENST00000282516 YPEL4Q96NS1 127 aa6.45□□□□□ -1.38
NIPBL-201ENST00000282516 CHD8Q9HCK8 2581 aa6.45□□□□□ -1.38
NIPBL-201ENST00000282516 TRBV7-7A0A0K0K1E9 115 aa6.45□□□□□ -1.38
NIPBL-201ENST00000282516 CRYGAP11844 174 aa6.45□□□□□ -1.38
NIPBL-201ENST00000282516 XGP55808 180 aa6.45□□□□□ -1.38
NIPBL-201ENST00000282516 Q8N814 137 aa6.45□□□□□ -1.38
NIPBL-201ENST00000282516 EIF4EBP1Q13541 118 aaPredicted RBP6.44□□□□□ -1.38
NIPBL-201ENST00000282516 FASNP49327 2511 aaKnown RBP6.44□□□□□ -1.38
NIPBL-201ENST00000282516 SPINK1P00995 79 aa6.44□□□□□ -1.38
NIPBL-201ENST00000282516 NANOS2P60321 138 aaKnown RBP6.44□□□□□ -1.38
NIPBL-201ENST00000282516 BBC3Q96PG8 261 aaPredicted RBP6.44□□□□□ -1.38
NIPBL-201ENST00000282516 FBXL19-AS1Q494R0 122 aa6.44□□□□□ -1.38
NIPBL-201ENST00000282516 C11orf1Q9H5F2 150 aa6.44□□□□□ -1.38
NIPBL-201ENST00000282516 H0Y9P7 68 aa6.43□□□□□ -1.38
NIPBL-201ENST00000282516 LINC00959A0A1B0GUT2 108 aa6.43□□□□□ -1.38
NIPBL-201ENST00000282516 CEP295Q9C0D2 2601 aa6.43□□□□□ -1.38
NIPBL-201ENST00000282516 MRGPRG-AS1Q2M3A8 158 aa6.43□□□□□ -1.38
NIPBL-201ENST00000282516 IGLV2-18A0A075B6J9 118 aa6.43□□□□□ -1.38
NIPBL-201ENST00000282516 NUPR2A6NF83 97 aa6.43□□□□□ -1.38
NIPBL-201ENST00000282516 LIMD2Q9BT23 127 aa6.43□□□□□ -1.38
NIPBL-201ENST00000282516 LINC01547P58512 204 aaPredicted RBP6.42□□□□□ -1.38
NIPBL-201ENST00000282516 EGFEM1PQ0D2K5 195 aa6.42□□□□□ -1.38
NIPBL-201ENST00000282516 A8MZ25 164 aa6.42□□□□□ -1.38
NIPBL-201ENST00000282516 MBD6Q96DN6 1003 aa6.42□□□□□ -1.38
NIPBL-201ENST00000282516 LY6G6CO95867 125 aa6.42□□□□□ -1.38
NIPBL-201ENST00000282516 M0R2N4 97 aa6.42□□□□□ -1.38
NIPBL-201ENST00000282516 LTBP2Q14767 1821 aa6.42□□□□□ -1.38
NIPBL-201ENST00000282516 BEAN1Q3B7T3 259 aa6.42□□□□□ -1.38
NIPBL-201ENST00000282516 C2orf91Q6ZV80 131 aa6.41□□□□□ -1.38
NIPBL-201ENST00000282516 CLUHP3Q96NS8 147 aa6.41□□□□□ -1.38
NIPBL-201ENST00000282516 FSTL3O95633 263 aa6.41□□□□□ -1.38
NIPBL-201ENST00000282516 FSHBP01225 129 aa6.41□□□□□ -1.38
NIPBL-201ENST00000282516 HCG22E2RYF7 251 aa6.41□□□□□ -1.38
NIPBL-201ENST00000282516 F8WDY8 70 aa6.41□□□□□ -1.38
NIPBL-201ENST00000282516 CYSRT1A8MQ03 144 aa6.4□□□□□ -1.38
NIPBL-201ENST00000282516 RETNLBQ9BQ08 111 aa6.4□□□□□ -1.38
NIPBL-201ENST00000282516 Q9BRP9 147 aa6.4□□□□□ -1.38
NIPBL-201ENST00000282516 hDV103S1A0JD37 113 aa6.4□□□□□ -1.39
NIPBL-201ENST00000282516 PLA2G2AP14555 144 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 TRBV10-3A0A0K0K1G6 114 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 PCOTHQ58A44 107 aa6.39□□□□□ -1.39
NIPBL-201ENST00000282516 Q8N3U1 123 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms