RNA–Protein interactions for RNA: ENST00000278386.10

CD44-203, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 1 (best) BASIC

Gene CD44, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-203ENST00000278386 TNFRSF6BO95407 300 aa7.86□□□□□ -1.15
CD44-203ENST00000278386 KRTAP10-8P60410 259 aa7.86□□□□□ -1.15
CD44-203ENST00000278386 PEA15Q15121 130 aa7.86□□□□□ -1.15
CD44-203ENST00000278386 C1orf137Q5JT78 98 aa7.86□□□□□ -1.15
CD44-203ENST00000278386 MRPL54Q6P161 138 aaKnown RBP7.86□□□□□ -1.15
CD44-203ENST00000278386 PHF5AQ7RTV0 110 aaKnown RBP7.86□□□□□ -1.15
CD44-203ENST00000278386 IFITM10A6NMD0 228 aa7.85□□□□□ -1.15
CD44-203ENST00000278386 NDUFA1O15239 70 aa7.85□□□□□ -1.15
CD44-203ENST00000278386 RPL32P62910 135 aaKnown RBP7.85□□□□□ -1.15
CD44-203ENST00000278386 HBBP68871 147 aa7.85□□□□□ -1.15
CD44-203ENST00000278386 SPANXA1Q9NS26 97 aa7.85□□□□□ -1.15
CD44-203ENST00000278386 TRBV24-1A0A075B6N3 115 aa7.84□□□□□ -1.15
CD44-203ENST00000278386 F8W036 122 aa7.84□□□□□ -1.15
CD44-203ENST00000278386 S100A8P05109 93 aa7.84□□□□□ -1.15
CD44-203ENST00000278386 RNF151Q2KHN1 245 aa7.84□□□□□ -1.15
CD44-203ENST00000278386 SMDT1Q9H4I9 107 aa7.84□□□□□ -1.15
CD44-203ENST00000278386 MRPL35Q9NZE8 188 aaKnown RBP7.84□□□□□ -1.15
CD44-203ENST00000278386 NPYP01303 97 aa7.83□□□□□ -1.16
CD44-203ENST00000278386 IMMP2LQ96T52 175 aa7.83□□□□□ -1.16
CD44-203ENST00000278386 TGIF2-C20orf24A0A0A6YYL0 155 aa7.82□□□□□ -1.16
CD44-203ENST00000278386 F8WDY8 70 aa7.82□□□□□ -1.16
CD44-203ENST00000278386 IFI27P40305 119 aaPredicted RBP7.82□□□□□ -1.16
CD44-203ENST00000278386 MRPS36P82909 103 aaKnown RBP7.82□□□□□ -1.16
CD44-203ENST00000278386 FAM19A5Q7Z5A7 132 aaPredicted RBP7.82□□□□□ -1.16
CD44-203ENST00000278386 IGHV3OR16-9A0A0B4J2B5 98 aa7.81□□□□□ -1.16
CD44-203ENST00000278386 IFITM2Q01629 132 aa7.81□□□□□ -1.16
CD44-203ENST00000278386 FAM104AQ969W3 186 aa7.81□□□□□ -1.16
CD44-203ENST00000278386 A0A087WZ39 114 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 A0A1B0GXF2 115 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 FAM168BA1KXE4 195 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 PPBPP02775 128 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 RAB5AP20339 215 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 GAGE2EQ4V326 116 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 C10orf25Q5T742 122 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 UNQ6190/PRO20217Q6UXQ8 127 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 ORMDL3Q8N138 153 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 C6orf48Q9UBA6 75 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 GAGE2DQ9UEU5 116 aa7.8□□□□□ -1.16
CD44-203ENST00000278386 IGLV7-43P04211 117 aa7.79□□□□□ -1.16
CD44-203ENST00000278386 DIRC1Q969H9 104 aa7.79□□□□□ -1.16
CD44-203ENST00000278386 PRELID3AQ96N28 172 aa7.79□□□□□ -1.16
CD44-203ENST00000278386 TLX1NBP0CAT3 122 aa7.78□□□□□ -1.16
CD44-203ENST00000278386 UBE2BP63146 152 aa7.78□□□□□ -1.16
CD44-203ENST00000278386 CLLU1Q5K131 121 aa7.78□□□□□ -1.16
CD44-203ENST00000278386 TMEM141Q96I45 108 aa7.78□□□□□ -1.16
CD44-203ENST00000278386 IGLV4-3A0A075B6K6 122 aa7.77□□□□□ -1.17
CD44-203ENST00000278386 M0QXV9 152 aa7.77□□□□□ -1.17
CD44-203ENST00000278386 RAB14P61106 215 aa7.77□□□□□ -1.17
CD44-203ENST00000278386 TMEM136Q6ZRR5 245 aa7.77□□□□□ -1.17
CD44-203ENST00000278386 ATP5L2Q7Z4Y8 100 aa7.77□□□□□ -1.17
CD44-203ENST00000278386 TRBV30A0A0K0K1B3 111 aa7.76□□□□□ -1.17
CD44-203ENST00000278386 LOC389332A0A1B0GUA5 103 aa7.76□□□□□ -1.17
CD44-203ENST00000278386 H0Y9J4 135 aa7.76□□□□□ -1.17
CD44-203ENST00000278386 TEX43Q6ZNM6 134 aa7.76□□□□□ -1.17
CD44-203ENST00000278386 PRR26Q8N8Z3 221 aa7.76□□□□□ -1.17
CD44-203ENST00000278386 PACRGQ96M98 296 aaPredicted RBP7.76□□□□□ -1.17
CD44-203ENST00000278386 C2orf88Q9BSF0 95 aa7.76□□□□□ -1.17
CD44-203ENST00000278386 MAP1LC3AQ9H492 121 aa7.76□□□□□ -1.17
CD44-203ENST00000278386 LINC00242Q5T6M2 205 aa7.75□□□□□ -1.17
CD44-203ENST00000278386 C2orf82Q6UX34 121 aa7.75□□□□□ -1.17
CD44-203ENST00000278386 Q6ZN92 141 aa7.75□□□□□ -1.17
CD44-203ENST00000278386 KRTAP11-1Q8IUC1 163 aa7.75□□□□□ -1.17
CD44-203ENST00000278386 PYGO1Q9Y3Y4 419 aa7.75□□□□□ -1.17
CD44-203ENST00000278386 LPAP08519 4548 aa7.75□□□□□ -1.17
CD44-203ENST00000278386 ADCYAP1P18509 176 aa7.74□□□□□ -1.17
CD44-203ENST00000278386 KIAA0087Q14695 138 aa7.74□□□□□ -1.17
CD44-203ENST00000278386 TOMM7Q9P0U1 55 aa7.74□□□□□ -1.17
CD44-203ENST00000278386 CYSLTR1Q9Y271 337 aa7.74□□□□□ -1.17
CD44-203ENST00000278386 NDUFC2-KCTD14E9PQ53 114 aa7.73□□□□□ -1.17
CD44-203ENST00000278386 PRSS2P07478 247 aa7.73□□□□□ -1.17
CD44-203ENST00000278386 UBE2D1P51668 147 aa7.73□□□□□ -1.17
CD44-203ENST00000278386 LAMTOR2Q9Y2Q5 125 aa7.73□□□□□ -1.17
CD44-203ENST00000278386 ZC2HC1BQ5TFG8 222 aa7.72□□□□□ -1.17
CD44-203ENST00000278386 C2orf66Q6UXQ4 117 aa7.72□□□□□ -1.17
CD44-203ENST00000278386 IGLV1-50A0A075B6I6 118 aa7.71□□□□□ -1.18
CD44-203ENST00000278386 PNRC1Q12796 327 aaPredicted RBP7.71□□□□□ -1.18
CD44-203ENST00000278386 C9orf129Q5T035 196 aaKnown RBP7.71□□□□□ -1.18
CD44-203ENST00000278386 KRTAP7-1Q8IUC3 87 aa7.71□□□□□ -1.18
CD44-203ENST00000278386 Q8N8P6 123 aa7.71□□□□□ -1.18
CD44-203ENST00000278386 CKS1BP61024 79 aa7.7□□□□□ -1.18
CD44-203ENST00000278386 ORMDL2Q53FV1 153 aa7.7□□□□□ -1.18
CD44-203ENST00000278386 LINC00173Q6ZV60 143 aa7.7□□□□□ -1.18
CD44-203ENST00000278386 LINC01561Q8N1V8 128 aa7.7□□□□□ -1.18
CD44-203ENST00000278386 LINC00469Q8N7U9 141 aa7.7□□□□□ -1.18
CD44-203ENST00000278386 VCX2Q9H322 139 aa7.7□□□□□ -1.18
CD44-203ENST00000278386 TMEM218A2RU14 115 aa7.69□□□□□ -1.18
CD44-203ENST00000278386 PRSS47A8MTI9 375 aa7.69□□□□□ -1.18
CD44-203ENST00000278386 MT-ND4LP03901 98 aa7.69□□□□□ -1.18
CD44-203ENST00000278386 KRTAP1-4P0C5Y4 121 aa7.69□□□□□ -1.18
CD44-203ENST00000278386 ANAPC16Q96DE5 110 aa7.69□□□□□ -1.18
CD44-203ENST00000278386 AMELXQ99217 191 aa7.69□□□□□ -1.18
CD44-203ENST00000278386 C6orf226Q5I0X4 101 aa7.68□□□□□ -1.18
CD44-203ENST00000278386 UQCC3Q6UW78 93 aa7.68□□□□□ -1.18
CD44-203ENST00000278386 ALKBH7Q9BT30 221 aaPredicted RBP7.68□□□□□ -1.18
CD44-203ENST00000278386 RPL13AP40429 203 aaKnown RBP7.67□□□□□ -1.18
CD44-203ENST00000278386 Q8IZM0 81 aa7.67□□□□□ -1.18
CD44-203ENST00000278386 K7EMI3 77 aa7.66□□□□□ -1.18
CD44-203ENST00000278386 NPSP0C0P6 89 aa7.66□□□□□ -1.18
CD44-203ENST00000278386 HERVK_113P63121 156 aa7.66□□□□□ -1.18
CD44-203ENST00000278386 SEC11AP67812 179 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 110.2 ms