RNA–Protein interactions for RNA: ENST00000274254.9

SKP2-201, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene SKP2, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-201ENST00000274254 SYS1-DBNDD2H3BUS1 97 aa11.41□□□□□ -0.58
SKP2-201ENST00000274254 ODF1Q14990 250 aa11.41□□□□□ -0.58
SKP2-201ENST00000274254 SPATA12Q7Z6I5 190 aa11.41□□□□□ -0.58
SKP2-201ENST00000274254 TINCRA0A1B0GVN0 87 aa11.4□□□□□ -0.58
SKP2-201ENST00000274254 H0Y8G0 127 aa11.4□□□□□ -0.58
SKP2-201ENST00000274254 PSCAO43653 123 aa11.4□□□□□ -0.58
SKP2-201ENST00000274254 C3orf79P0CE67 100 aa11.4□□□□□ -0.58
SKP2-201ENST00000274254 IGLC3P0DOY3 106 aa11.4□□□□□ -0.58
SKP2-201ENST00000274254 CHTOPQ9Y3Y2 248 aaKnown RBP11.4□□□□□ -0.58
SKP2-201ENST00000274254 DNAH10Q8IVF4 4471 aa11.4□□□□□ -0.58
SKP2-201ENST00000274254 F8VRH5 84 aa11.4□□□□□ -0.59
SKP2-201ENST00000274254 HERVK_113P63121 156 aa11.4□□□□□ -0.59
SKP2-201ENST00000274254 MRPL35Q9NZE8 188 aaKnown RBP11.4□□□□□ -0.59
SKP2-201ENST00000274254 GEMIN7Q9H840 131 aaKnown RBP11.39□□□□□ -0.59
SKP2-201ENST00000274254 IGLV5-45A0A087WSX0 123 aa11.38□□□□□ -0.59
SKP2-201ENST00000274254 KRTDAPP60985 99 aa11.38□□□□□ -0.59
SKP2-201ENST00000274254 PET117Q6UWS5 81 aa11.38□□□□□ -0.59
SKP2-201ENST00000274254 LRCOL1A6NCL2 159 aa11.37□□□□□ -0.59
SKP2-201ENST00000274254 COX7A2LO14548 114 aa11.37□□□□□ -0.59
SKP2-201ENST00000274254 LINC01545Q5VT33 79 aa11.37□□□□□ -0.59
SKP2-201ENST00000274254 C5orf38Q86SI9 138 aa11.37□□□□□ -0.59
SKP2-201ENST00000274254 CHAC1Q9BUX1 264 aa11.37□□□□□ -0.59
SKP2-201ENST00000274254 CDKN2A-AS1Q9UH64 79 aa11.37□□□□□ -0.59
SKP2-201ENST00000274254 A0A087WZ39 114 aa11.36□□□□□ -0.59
SKP2-201ENST00000274254 C11orf86A6NJI1 115 aa11.36□□□□□ -0.59
SKP2-201ENST00000274254 DNAH17Q9UFH2 4485 aa11.35□□□□□ -0.59
SKP2-201ENST00000274254 FRAS1Q86XX4 4008 aa11.35□□□□□ -0.59
SKP2-201ENST00000274254 ZNF22P17026 224 aaPredicted RBP11.35□□□□□ -0.59
SKP2-201ENST00000274254 WFDC2Q14508 124 aa11.35□□□□□ -0.59
SKP2-201ENST00000274254 LINC01561Q8N1V8 128 aa11.35□□□□□ -0.59
SKP2-201ENST00000274254 LINC00469Q8N7U9 141 aa11.35□□□□□ -0.59
SKP2-201ENST00000274254 PMCHL2Q9BQD1 86 aa11.35□□□□□ -0.59
SKP2-201ENST00000274254 PLNP26678 52 aa11.34□□□□□ -0.59
SKP2-201ENST00000274254 TNP2Q05952 138 aa11.34□□□□□ -0.59
SKP2-201ENST00000274254 A0A087WTM6 91 aa11.33□□□□□ -0.6
SKP2-201ENST00000274254 USP17L23D6RBM5 183 aa11.33□□□□□ -0.6
SKP2-201ENST00000274254 C15orf56Q8N910 161 aa11.33□□□□□ -0.6
SKP2-201ENST00000274254 OR10D4PQ8NGN7 298 aa11.33□□□□□ -0.6
SKP2-201ENST00000274254 LECT2O14960 151 aa11.32□□□□□ -0.6
SKP2-201ENST00000274254 DPM2O94777 84 aa11.32□□□□□ -0.6
SKP2-201ENST00000274254 MALP21145 153 aa11.32□□□□□ -0.6
SKP2-201ENST00000274254 LINC00336Q6ZUF6 198 aa11.32□□□□□ -0.6
SKP2-201ENST00000274254 RYR3Q15413 4870 aa11.31□□□□□ -0.6
SKP2-201ENST00000274254 IGHV1-58A0A0C4DH39 117 aa11.31□□□□□ -0.6
SKP2-201ENST00000274254 CFAP161Q6P656 301 aa11.31□□□□□ -0.6
SKP2-201ENST00000274254 IGHV3-64A0A075B6Q5 118 aa11.3□□□□□ -0.6
SKP2-201ENST00000274254 C20orf202A1L168 122 aa11.3□□□□□ -0.6
SKP2-201ENST00000274254 H3BRM9 83 aa11.3□□□□□ -0.6
SKP2-201ENST00000274254 IGKCP01834 107 aa11.3□□□□□ -0.6
SKP2-201ENST00000274254 TMEM170BQ5T4T1 132 aa11.3□□□□□ -0.6
SKP2-201ENST00000274254 FAT2Q9NYQ8 4349 aa11.3□□□□□ -0.6
SKP2-201ENST00000274254 GVQW2A0A096LPI5 108 aaPredicted RBP11.3□□□□□ -0.6
SKP2-201ENST00000274254 SMIM1B2RUZ4 78 aa11.3□□□□□ -0.6
SKP2-201ENST00000274254 APOMO95445 188 aa11.3□□□□□ -0.6
SKP2-201ENST00000274254 SPINK8P0C7L1 97 aa11.28□□□□□ -0.6
SKP2-201ENST00000274254 C14orf177Q52M58 125 aa11.28□□□□□ -0.6
SKP2-201ENST00000274254 Q8N814 137 aa11.28□□□□□ -0.6
SKP2-201ENST00000274254 IGLV5-39A0A0G2JS06 123 aa11.27□□□□□ -0.61
SKP2-201ENST00000274254 TMEM223A0PJW6 202 aa11.27□□□□□ -0.61
SKP2-201ENST00000274254 ORAOV1Q8WV07 137 aa11.27□□□□□ -0.61
SKP2-201ENST00000274254 HIGD2BQ4VC39 106 aa11.26□□□□□ -0.61
SKP2-201ENST00000274254 hDV102S1A0JD36 115 aa11.25□□□□□ -0.61
SKP2-201ENST00000274254 AKR1D1P51857 326 aa11.25□□□□□ -0.61
SKP2-201ENST00000274254 KIAA0087Q14695 138 aa11.25□□□□□ -0.61
SKP2-201ENST00000274254 EREGO14944 169 aa11.25□□□□□ -0.61
SKP2-201ENST00000274254 SPAG11BQ08648 103 aa11.25□□□□□ -0.61
SKP2-201ENST00000274254 ZNF561-AS1K7EIQ3 104 aa11.24□□□□□ -0.61
SKP2-201ENST00000274254 Q8IZM0 81 aa11.24□□□□□ -0.61
SKP2-201ENST00000274254 LINC00526Q96FQ7 95 aa11.24□□□□□ -0.61
SKP2-201ENST00000274254 SCGB1D1O95968 90 aa11.22□□□□□ -0.61
SKP2-201ENST00000274254 SLPIP03973 132 aa11.22□□□□□ -0.61
SKP2-201ENST00000274254 JOSD1Q15040 202 aaPredicted RBP11.22□□□□□ -0.61
SKP2-201ENST00000274254 ATOH7Q8N100 152 aa11.22□□□□□ -0.61
SKP2-201ENST00000274254 NTN5Q8WTR8 489 aaPredicted RBP11.22□□□□□ -0.61
SKP2-201ENST00000274254 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.21□□□□□ -0.61
SKP2-201ENST00000274254 LOC105371267A0A1B0GV96 52 aa11.21□□□□□ -0.61
SKP2-201ENST00000274254 HERVK_113P61574 105 aa11.21□□□□□ -0.61
SKP2-201ENST00000274254 COX7B2Q8TF08 81 aa11.21□□□□□ -0.61
SKP2-201ENST00000274254 C2orf48Q96LS8 159 aa11.21□□□□□ -0.61
SKP2-201ENST00000274254 TOMM7Q9P0U1 55 aa11.21□□□□□ -0.61
SKP2-201ENST00000274254 A0A1B0GVY2 172 aa11.2□□□□□ -0.62
SKP2-201ENST00000274254 PRSS2P07478 247 aa11.2□□□□□ -0.62
SKP2-201ENST00000274254 CNBPP62633 177 aaKnown RBP11.2□□□□□ -0.62
SKP2-201ENST00000274254 STPG4Q8N801 248 aa11.2□□□□□ -0.62
SKP2-201ENST00000274254 F8WDY8 70 aa11.19□□□□□ -0.62
SKP2-201ENST00000274254 E9PLD3 99 aa11.19□□□□□ -0.62
SKP2-201ENST00000274254 KRTAP10-2P60368 255 aa11.19□□□□□ -0.62
SKP2-201ENST00000274254 C6orf226Q5I0X4 101 aa11.19□□□□□ -0.62
SKP2-201ENST00000274254 PYY3Q5JQD4 70 aa11.18□□□□□ -0.62
SKP2-201ENST00000274254 C2orf82Q6UX34 121 aa11.18□□□□□ -0.62
SKP2-201ENST00000274254 CAMK2N2Q96S95 79 aa11.18□□□□□ -0.62
SKP2-201ENST00000274254 DNAH11Q96DT5 4516 aa11.18□□□□□ -0.62
SKP2-201ENST00000274254 LEPROTO15243 131 aa11.17□□□□□ -0.62
SKP2-201ENST00000274254 CXCL5P42830 114 aa11.17□□□□□ -0.62
SKP2-201ENST00000274254 SYCNQ0VAF6 134 aa11.17□□□□□ -0.62
SKP2-201ENST00000274254 PKD1P98161 4303 aa11.16□□□□□ -0.62
SKP2-201ENST00000274254 NDUFA1O15239 70 aa11.16□□□□□ -0.62
SKP2-201ENST00000274254 FUSP35637 526 aaKnown RBP eCLIP11.16□□□□□ -0.62
SKP2-201ENST00000274254 TSPEAR-AS2P59090 65 aa11.16□□□□□ -0.62
SKP2-201ENST00000274254 CKS1BP61024 79 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms