RNA–Protein interactions for RNA: ENST00000272091.7

SDE2-201, Transcript of SDE2 telomere maintenance homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDE2, Length 3,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDE2-201ENST00000272091 H3BNG1 76 aa8.31□□□□□ -1.08
SDE2-201ENST00000272091 FXYD2P54710 66 aa8.31□□□□□ -1.08
SDE2-201ENST00000272091 DNHD1Q96M86 4753 aa8.31□□□□□ -1.08
SDE2-201ENST00000272091 SMIM1B2RUZ4 78 aa8.31□□□□□ -1.08
SDE2-201ENST00000272091 LGALS3P17931 250 aaKnown RBP8.31□□□□□ -1.08
SDE2-201ENST00000272091 LYPD5Q6UWN5 251 aa8.3□□□□□ -1.08
SDE2-201ENST00000272091 IGKV3OR2-268A0A0C4DH90 116 aa8.3□□□□□ -1.08
SDE2-201ENST00000272091 TMEM262E9PQX1 116 aa8.3□□□□□ -1.08
SDE2-201ENST00000272091 COL7A1Q02388 2944 aa8.3□□□□□ -1.08
SDE2-201ENST00000272091 LELP1Q5T871 98 aa8.3□□□□□ -1.08
SDE2-201ENST00000272091 CEND1Q8N111 149 aa8.29□□□□□ -1.08
SDE2-201ENST00000272091 TM2D2Q9BX73 214 aa8.29□□□□□ -1.08
SDE2-201ENST00000272091 LINC00959A0A1B0GUT2 108 aa8.29□□□□□ -1.08
SDE2-201ENST00000272091 SEC11AP67812 179 aa8.29□□□□□ -1.08
SDE2-201ENST00000272091 SH2D6Q7Z4S9 175 aa8.29□□□□□ -1.08
SDE2-201ENST00000272091 DEFB131BA0A096LNP1 70 aa8.29□□□□□ -1.08
SDE2-201ENST00000272091 GCSHP23434 173 aa8.28□□□□□ -1.08
SDE2-201ENST00000272091 TAL2Q16559 108 aa8.28□□□□□ -1.08
SDE2-201ENST00000272091 CLPSL2Q6UWE3 100 aa8.28□□□□□ -1.08
SDE2-201ENST00000272091 IGHV3OR16-9A0A0B4J2B5 98 aa8.28□□□□□ -1.08
SDE2-201ENST00000272091 H3BRM9 83 aa8.28□□□□□ -1.08
SDE2-201ENST00000272091 ZFAND6Q6FIF0 208 aa8.28□□□□□ -1.08
SDE2-201ENST00000272091 SCGB1D4Q6XE38 83 aa8.28□□□□□ -1.08
SDE2-201ENST00000272091 LITAFQ99732 161 aa8.28□□□□□ -1.08
SDE2-201ENST00000272091 A0A0J9YXY3 114 aa8.27□□□□□ -1.09
SDE2-201ENST00000272091 HIST1H4GQ99525 98 aa8.27□□□□□ -1.09
SDE2-201ENST00000272091 LINC00269Q8N2A0 174 aa8.27□□□□□ -1.09
SDE2-201ENST00000272091 SPANXB1Q9NS25 103 aaPredicted RBP8.26□□□□□ -1.09
SDE2-201ENST00000272091 NDUFA12Q9UI09 145 aa8.26□□□□□ -1.09
SDE2-201ENST00000272091 PCP4P48539 62 aa8.25□□□□□ -1.09
SDE2-201ENST00000272091 ESRGQ1W209 222 aa8.25□□□□□ -1.09
SDE2-201ENST00000272091 IGHV3-30P01768 117 aa8.25□□□□□ -1.09
SDE2-201ENST00000272091 IGHV3-30-5P0DP03 117 aa8.25□□□□□ -1.09
SDE2-201ENST00000272091 WFDC10BQ8IUB3 73 aa8.25□□□□□ -1.09
SDE2-201ENST00000272091 K7ERJ3 54 aa8.24□□□□□ -1.09
SDE2-201ENST00000272091 NDUFA1O15239 70 aa8.24□□□□□ -1.09
SDE2-201ENST00000272091 DYNC2H1Q8NCM8 4307 aaKnown RBP8.24□□□□□ -1.09
SDE2-201ENST00000272091 A0A087WZ39 114 aa8.24□□□□□ -1.09
SDE2-201ENST00000272091 ANGP03950 147 aaKnown RBP8.24□□□□□ -1.09
SDE2-201ENST00000272091 ADAMTSL4-AS1Q5T5F5 129 aa8.24□□□□□ -1.09
SDE2-201ENST00000272091 ZNF625Q96I27 306 aaPredicted RBP8.24□□□□□ -1.09
SDE2-201ENST00000272091 REG3AQ06141 175 aa8.23□□□□□ -1.09
SDE2-201ENST00000272091 C5orf38Q86SI9 138 aa8.23□□□□□ -1.09
SDE2-201ENST00000272091 PRKDCP78527 4128 aaKnown RBP8.23□□□□□ -1.09
SDE2-201ENST00000272091 A6NDN8 102 aa8.23□□□□□ -1.09
SDE2-201ENST00000272091 XCL1P47992 114 aa8.23□□□□□ -1.09
SDE2-201ENST00000272091 TRAV10A0A0B4J240 114 aa8.22□□□□□ -1.09
SDE2-201ENST00000272091 B9D2Q9BPU9 175 aa8.22□□□□□ -1.09
SDE2-201ENST00000272091 PRR34Q9NV39 138 aa8.22□□□□□ -1.09
SDE2-201ENST00000272091 DNAH1Q9P2D7 4330 aa8.22□□□□□ -1.09
SDE2-201ENST00000272091 A0A1B0GWB2 263 aa8.22□□□□□ -1.09
SDE2-201ENST00000272091 SS18Q15532 418 aa8.22□□□□□ -1.09
SDE2-201ENST00000272091 ENHOQ6UWT2 76 aa8.22□□□□□ -1.09
SDE2-201ENST00000272091 Q9H8V8 135 aa8.22□□□□□ -1.09
SDE2-201ENST00000272091 NHP2Q9NX24 153 aaKnown RBP8.22□□□□□ -1.09
SDE2-201ENST00000272091 SRSF9Q13242 221 aaKnown RBP eCLIP8.21□□□□□ -1.09
SDE2-201ENST00000272091 EIF4EBP3O60516 100 aaPredicted RBP8.21□□□□□ -1.09
SDE2-201ENST00000272091 IGHV3-33P01772 117 aa8.21□□□□□ -1.09
SDE2-201ENST00000272091 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.1
SDE2-201ENST00000272091 CHCHD10Q8WYQ3 142 aaPredicted RBP8.21□□□□□ -1.1
SDE2-201ENST00000272091 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
SDE2-201ENST00000272091 RAB37Q96AX2 223 aa8.2□□□□□ -1.1
SDE2-201ENST00000272091 KLK12Q9UKR0 248 aa8.2□□□□□ -1.1
SDE2-201ENST00000272091 FOXI1Q12951 378 aa8.2□□□□□ -1.1
SDE2-201ENST00000272091 NAA38Q9BRA0 125 aaKnown RBP8.2□□□□□ -1.1
SDE2-201ENST00000272091 OCIAD2Q56VL3 154 aa8.19□□□□□ -1.1
SDE2-201ENST00000272091 SPANXDQ9BXN6 97 aa8.19□□□□□ -1.1
SDE2-201ENST00000272091 SPANXCQ9NY87 97 aa8.19□□□□□ -1.1
SDE2-201ENST00000272091 TMEM238C9JI98 176 aa8.19□□□□□ -1.1
SDE2-201ENST00000272091 SMIM13P0DJ93 91 aa8.19□□□□□ -1.1
SDE2-201ENST00000272091 CD164L2Q6UWJ8 174 aa8.19□□□□□ -1.1
SDE2-201ENST00000272091 MUSTN1Q8IVN3 82 aa8.19□□□□□ -1.1
SDE2-201ENST00000272091 C9orf118A6NHY6 69 aa8.18□□□□□ -1.1
SDE2-201ENST00000272091 TIMM17BO60830 172 aa8.18□□□□□ -1.1
SDE2-201ENST00000272091 CSMD3Q7Z407 3707 aa8.18□□□□□ -1.1
SDE2-201ENST00000272091 DAND5Q8N907 189 aa8.18□□□□□ -1.1
SDE2-201ENST00000272091 LYSTQ99698 3801 aa8.18□□□□□ -1.1
SDE2-201ENST00000272091 MIAQ16674 131 aa8.17□□□□□ -1.1
SDE2-201ENST00000272091 LINC01561Q8N1V8 128 aa8.17□□□□□ -1.1
SDE2-201ENST00000272091 CFC1BP0CG36 223 aa8.17□□□□□ -1.1
SDE2-201ENST00000272091 CFC1P0CG37 223 aa8.17□□□□□ -1.1
SDE2-201ENST00000272091 TOMM7Q9P0U1 55 aa8.17□□□□□ -1.1
SDE2-201ENST00000272091 DNAH7Q8WXX0 4024 aa8.17□□□□□ -1.1
SDE2-201ENST00000272091 MEGF8Q7Z7M0 2845 aa8.16□□□□□ -1.1
SDE2-201ENST00000272091 KRTAP26-1Q6PEX3 210 aa8.16□□□□□ -1.1
SDE2-201ENST00000272091 C15orf53Q8NAA6 179 aa8.16□□□□□ -1.1
SDE2-201ENST00000272091 LINC00588Q9Y4M8 146 aa8.16□□□□□ -1.1
SDE2-201ENST00000272091 A4D1N5 150 aa8.16□□□□□ -1.1
SDE2-201ENST00000272091 H3BUT2 72 aa8.16□□□□□ -1.1
SDE2-201ENST00000272091 KIAA0087Q14695 138 aa8.16□□□□□ -1.1
SDE2-201ENST00000272091 CBY1Q9Y3M2 126 aa8.16□□□□□ -1.1
SDE2-201ENST00000272091 GAGE12HA6NDE8 117 aa8.15□□□□□ -1.1
SDE2-201ENST00000272091 NPC2P61916 151 aa8.15□□□□□ -1.1
SDE2-201ENST00000272091 COX7A2LO14548 114 aa8.15□□□□□ -1.11
SDE2-201ENST00000272091 LINC01556Q5JQF7 62 aa8.15□□□□□ -1.11
SDE2-201ENST00000272091 SOSTDC1Q6X4U4 206 aa8.15□□□□□ -1.11
SDE2-201ENST00000272091 IGLL5B9A064 214 aa8.14□□□□□ -1.11
SDE2-201ENST00000272091 HERV-K104P63124 156 aa8.14□□□□□ -1.11
SDE2-201ENST00000272091 Q8IZM0 81 aa8.14□□□□□ -1.11
SDE2-201ENST00000272091 UBE2WQ96B02 151 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms