RNA–Protein interactions for RNA: ENST00000265038.9

ERCC8-201, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ERCC8, Length 2,017 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-201ENST00000265038 COX7A2LO14548 114 aa5.41□□□□□ -1.54
ERCC8-201ENST00000265038 C5orf38Q86SI9 138 aa5.41□□□□□ -1.54
ERCC8-201ENST00000265038 PRSS3P2Q8NHM4 247 aa5.41□□□□□ -1.54
ERCC8-201ENST00000265038 CIRBP-AS1Q8TBR5 109 aa5.41□□□□□ -1.54
ERCC8-201ENST00000265038 LINC00526Q96FQ7 95 aa5.41□□□□□ -1.54
ERCC8-201ENST00000265038 FAT1Q14517 4588 aa5.4□□□□□ -1.54
ERCC8-201ENST00000265038 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.4□□□□□ -1.54
ERCC8-201ENST00000265038 IFITM10A6NMD0 228 aa5.4□□□□□ -1.54
ERCC8-201ENST00000265038 C21orf62-AS1Q17RA5 79 aa5.4□□□□□ -1.54
ERCC8-201ENST00000265038 ZC2HC1BQ5TFG8 222 aa5.4□□□□□ -1.54
ERCC8-201ENST00000265038 TMEM141Q96I45 108 aa5.4□□□□□ -1.54
ERCC8-201ENST00000265038 TRAPPC1Q9Y5R8 145 aa5.4□□□□□ -1.54
ERCC8-201ENST00000265038 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.4□□□□□ -1.54
ERCC8-201ENST00000265038 IGHV3-64A0A075B6Q5 118 aa5.4□□□□□ -1.55
ERCC8-201ENST00000265038 IGHV3OR16-9A0A0B4J2B5 98 aa5.4□□□□□ -1.55
ERCC8-201ENST00000265038 MALP21145 153 aa5.4□□□□□ -1.55
ERCC8-201ENST00000265038 Q5VSD8 79 aa5.4□□□□□ -1.55
ERCC8-201ENST00000265038 LINC00173Q6ZV60 143 aa5.4□□□□□ -1.55
ERCC8-201ENST00000265038 TOMM6Q96B49 74 aa5.4□□□□□ -1.55
ERCC8-201ENST00000265038 NPSP0C0P6 89 aa5.39□□□□□ -1.55
ERCC8-201ENST00000265038 COX6A2Q02221 97 aa5.39□□□□□ -1.55
ERCC8-201ENST00000265038 LINC00242Q5T6M2 205 aa5.39□□□□□ -1.55
ERCC8-201ENST00000265038 AMELXQ99217 191 aa5.39□□□□□ -1.55
ERCC8-201ENST00000265038 ABCA13Q86UQ4 5058 aa5.39□□□□□ -1.55
ERCC8-201ENST00000265038 IGLV4-69A0A075B6H9 119 aa5.38□□□□□ -1.55
ERCC8-201ENST00000265038 ZNF561-AS1K7EIQ3 104 aa5.38□□□□□ -1.55
ERCC8-201ENST00000265038 UBE2D1P51668 147 aa5.38□□□□□ -1.55
ERCC8-201ENST00000265038 CIRBPQ14011 172 aaKnown RBP5.38□□□□□ -1.55
ERCC8-201ENST00000265038 TEX43Q6ZNM6 134 aa5.38□□□□□ -1.55
ERCC8-201ENST00000265038 G0S2P27469 103 aa5.38□□□□□ -1.55
ERCC8-201ENST00000265038 CBLN2Q8IUK8 224 aa5.38□□□□□ -1.55
ERCC8-201ENST00000265038 URB1-AS1Q96HZ7 61 aa5.38□□□□□ -1.55
ERCC8-201ENST00000265038 TIMM17AQ99595 171 aa5.38□□□□□ -1.55
ERCC8-201ENST00000265038 VCX2Q9H322 139 aa5.38□□□□□ -1.55
ERCC8-201ENST00000265038 PCLOQ9Y6V0 5065 aa5.37□□□□□ -1.55
ERCC8-201ENST00000265038 FAM229AH3BQW9 127 aa5.37□□□□□ -1.55
ERCC8-201ENST00000265038 CHTF8P0CG12 524 aa5.37□□□□□ -1.55
ERCC8-201ENST00000265038 SYCNQ0VAF6 134 aa5.37□□□□□ -1.55
ERCC8-201ENST00000265038 Q6ZN92 141 aa5.37□□□□□ -1.55
ERCC8-201ENST00000265038 FA2HQ7L5A8 372 aa5.37□□□□□ -1.55
ERCC8-201ENST00000265038 ERASQ7Z444 233 aa5.37□□□□□ -1.55
ERCC8-201ENST00000265038 C18orf32Q8TCD1 76 aa5.37□□□□□ -1.55
ERCC8-201ENST00000265038 A0A087WZ39 114 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 APOMO95445 188 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 Q6ZRU5 148 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 CARD19Q96LW7 228 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 SCGB3A1Q96QR1 104 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 C2orf88Q9BSF0 95 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 SMCO4Q9NRQ5 59 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 SPAG11BQ08648 103 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 FAM19A3Q7Z5A8 133 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 OR10D4PQ8NGN7 298 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 SPACA4Q8TDM5 124 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 ORAOV1Q8WV07 137 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 C2orf48Q96LS8 159 aa5.36□□□□□ -1.55
ERCC8-201ENST00000265038 A0A096LNJ9 63 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 LINC00614P0C842 121 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 CAMK2N2Q96S95 79 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 A0A087WYN8 130 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 A0A096LNI7 61 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 LINC01549A6NIU2 74 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 INAFM2P0DMQ5 153 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 KIAA0087Q14695 138 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 PAPPA-AS1Q5QFB9 102 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 DPH3Q96FX2 82 aa5.35□□□□□ -1.55
ERCC8-201ENST00000265038 IGKV2-24A0A0C4DH68 120 aa5.34□□□□□ -1.55
ERCC8-201ENST00000265038 KRTAP10-4P60372 401 aaPredicted RBP5.34□□□□□ -1.55
ERCC8-201ENST00000265038 LINC01561Q8N1V8 128 aa5.34□□□□□ -1.55
ERCC8-201ENST00000265038 A0A0J9YXV3 536 aa5.33□□□□□ -1.56
ERCC8-201ENST00000265038 PLA2G1BP04054 148 aaKnown RBP5.33□□□□□ -1.56
ERCC8-201ENST00000265038 MAJINQ3KP22 176 aa5.33□□□□□ -1.56
ERCC8-201ENST00000265038 C10orf25Q5T742 122 aa5.33□□□□□ -1.56
ERCC8-201ENST00000265038 CST9LQ9H4G1 147 aa5.33□□□□□ -1.56
ERCC8-201ENST00000265038 PLAC8Q9NZF1 115 aa5.33□□□□□ -1.56
ERCC8-201ENST00000265038 F8WDY8 70 aa5.33□□□□□ -1.56
ERCC8-201ENST00000265038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.33□□□□□ -1.56
ERCC8-201ENST00000265038 PMCHL1Q16048 86 aa5.33□□□□□ -1.56
ERCC8-201ENST00000265038 TRGC2P03986 189 aa5.32□□□□□ -1.56
ERCC8-201ENST00000265038 RAB5BP61020 215 aa5.32□□□□□ -1.56
ERCC8-201ENST00000265038 HERVK_113P63121 156 aa5.32□□□□□ -1.56
ERCC8-201ENST00000265038 SEC11AP67812 179 aa5.32□□□□□ -1.56
ERCC8-201ENST00000265038 RNF151Q2KHN1 245 aa5.32□□□□□ -1.56
ERCC8-201ENST00000265038 PDZD11Q5EBL8 140 aa5.32□□□□□ -1.56
ERCC8-201ENST00000265038 UNQ6190/PRO20217Q6UXQ8 127 aa5.32□□□□□ -1.56
ERCC8-201ENST00000265038 MRPL35Q9NZE8 188 aaKnown RBP5.32□□□□□ -1.56
ERCC8-201ENST00000265038 CDKN2A-AS1Q9UH64 79 aa5.32□□□□□ -1.56
ERCC8-201ENST00000265038 LOC107984640A0A0U1RRK4 108 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 TINCRA0A1B0GVN0 87 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 COLCA2A8K830 154 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 NDUFA1O15239 70 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 HBDP02042 147 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 PTTG1IPP53801 180 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 PMVKQ15126 192 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 LCE2CQ5TA81 110 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 STPG4Q8N801 248 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 GEMIN7Q9H840 131 aaKnown RBP5.31□□□□□ -1.56
ERCC8-201ENST00000265038 C6orf48Q9UBA6 75 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 PKIGQ9Y2B9 76 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 IGLV5-45A0A087WSX0 123 aa5.31□□□□□ -1.56
ERCC8-201ENST00000265038 GAGE2BQ13066 116 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms