RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 C14orf177Q52M58 125 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 TOMM6Q96B49 74 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 SCGB3A1Q96QR1 104 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 PYGO1Q9Y3Y4 419 aa4.7□□□□□ -1.66
DEPDC1B-201ENST00000265036 SMR3BP02814 79 aaPredicted RBP4.69□□□□□ -1.66
DEPDC1B-201ENST00000265036 VCX2Q9H322 139 aa4.69□□□□□ -1.66
DEPDC1B-201ENST00000265036 K7EMI3 77 aa4.69□□□□□ -1.66
DEPDC1B-201ENST00000265036 LINC00614P0C842 121 aa4.69□□□□□ -1.66
DEPDC1B-201ENST00000265036 C21orf62-AS1Q17RA5 79 aa4.69□□□□□ -1.66
DEPDC1B-201ENST00000265036 LINC00242Q5T6M2 205 aa4.69□□□□□ -1.66
DEPDC1B-201ENST00000265036 C2orf88Q9BSF0 95 aa4.69□□□□□ -1.66
DEPDC1B-201ENST00000265036 PANO1I0J062 215 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 CHTF8P0CG12 524 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 UBE2D1P51668 147 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 XGP55808 180 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 FAM19A2Q8N3H0 131 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 PCLOQ9Y6V0 5065 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 VPS13BQ7Z7G8 4022 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 IGLV4-69A0A075B6H9 119 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 GVQW2A0A096LPI5 108 aaPredicted RBP4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 IGHV3OR16-9A0A0B4J2B5 98 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 A0A0J9YXV3 536 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 ZNF561-AS1K7EIQ3 104 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 NDUFA6P56556 154 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 ERASQ7Z444 233 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 BAGE3Q86Y29 109 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 ORAOV1Q8WV07 137 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 TIMM17AQ99595 171 aa4.68□□□□□ -1.66
DEPDC1B-201ENST00000265036 IGHV1-58A0A0C4DH39 117 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 IGKV2-24A0A0C4DH68 120 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 CDK2AP2O75956 126 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 HBDP02042 147 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 SPAG11BQ08648 103 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 CFAP161Q6P656 301 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 AMELXQ99217 191 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 KRTAP4-5Q9BYR2 181 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 LINC01546A6NGU7 62 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 SCXQ7RTU7 201 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 C9orf163Q8N9P6 203 aa4.67□□□□□ -1.66
DEPDC1B-201ENST00000265036 MYCBP2O75592 4640 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 H0Y8G0 127 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 SERF1AO75920 110 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 LINC00310P59036 64 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 CNBPP62633 177 aaKnown RBP4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 Q6ZRU5 148 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 TOMM7Q9P0U1 55 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 CDKN2A-AS1Q9UH64 79 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 HSBP1O75506 76 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 CARD19Q96LW7 228 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 CAMK2N2Q96S95 79 aa4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 GEMIN7Q9H840 131 aaKnown RBP4.66□□□□□ -1.66
DEPDC1B-201ENST00000265036 NUPR1O60356 82 aa4.65□□□□□ -1.66
DEPDC1B-201ENST00000265036 G0S2P27469 103 aa4.65□□□□□ -1.66
DEPDC1B-201ENST00000265036 RAB5BP61020 215 aa4.65□□□□□ -1.66
DEPDC1B-201ENST00000265036 C2orf82Q6UX34 121 aa4.65□□□□□ -1.66
DEPDC1B-201ENST00000265036 Q6ZSA8 131 aa4.65□□□□□ -1.66
DEPDC1B-201ENST00000265036 IGHV3-64A0A075B6Q5 118 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 A0A087WZ39 114 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 APOMO95445 188 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 S100A6P06703 90 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 SYCNQ0VAF6 134 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 ANKRD39Q53RE8 183 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 PAPPA-AS1Q5QFB9 102 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 C10orf25Q5T742 122 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 CIRBP-AS1Q8TBR5 109 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 CST9LQ9H4G1 147 aa4.65□□□□□ -1.67
DEPDC1B-201ENST00000265036 FABP4P15090 132 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 PMVKQ15126 192 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 SDIM1Q6ZPB5 146 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 SVIPQ8NHG7 77 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 CHAC1Q9BUX1 264 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 A0A096LNI7 61 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST1H2BKO60814 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST1H2BJP06899 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 SPINK8P0C7L1 97 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST1H2BOP23527 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST1H2BBP33778 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST1H2BDP58876 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST1H2BCP62807 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST2H2BEQ16778 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST1H2BHQ93079 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 CHCHD1Q96BP2 118 aaKnown RBP4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 DPH3Q96FX2 82 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 PACRGQ96M98 296 aaPredicted RBP4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST1H2BNQ99877 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HIST1H2BMQ99879 126 aa4.64□□□□□ -1.67
DEPDC1B-201ENST00000265036 HERVK_113P63121 156 aa4.63□□□□□ -1.67
DEPDC1B-201ENST00000265036 RPL18AQ02543 176 aaKnown RBP4.63□□□□□ -1.67
DEPDC1B-201ENST00000265036 PDZD11Q5EBL8 140 aa4.63□□□□□ -1.67
DEPDC1B-201ENST00000265036 UNQ6190/PRO20217Q6UXQ8 127 aa4.63□□□□□ -1.67
DEPDC1B-201ENST00000265036 LINC00518Q8N0U6 118 aa4.63□□□□□ -1.67
DEPDC1B-201ENST00000265036 NPSP0C0P6 89 aa4.63□□□□□ -1.67
DEPDC1B-201ENST00000265036 GAGE2BQ13066 116 aa4.63□□□□□ -1.67
DEPDC1B-201ENST00000265036 MAJINQ3KP22 176 aa4.63□□□□□ -1.67
DEPDC1B-201ENST00000265036 C9orf116Q5BN46 136 aaPredicted RBP4.63□□□□□ -1.67
DEPDC1B-201ENST00000265036 Q5VSD8 79 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms