RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 CHCHD5Q9BSY4 110 aa12.42□□□□□ -0.42
SDF4-201ENST00000263741 DNAH10Q8IVF4 4471 aa12.42□□□□□ -0.42
SDF4-201ENST00000263741 FABP2P12104 132 aa12.42□□□□□ -0.42
SDF4-201ENST00000263741 LINC01556Q5JQF7 62 aa12.42□□□□□ -0.42
SDF4-201ENST00000263741 A0A1W2PPM0 123 aa12.41□□□□□ -0.42
SDF4-201ENST00000263741 TTC32Q5I0X7 151 aa12.41□□□□□ -0.42
SDF4-201ENST00000263741 TRBV25-1A0A075B6N4 114 aa12.41□□□□□ -0.42
SDF4-201ENST00000263741 F8VRH5 84 aa12.41□□□□□ -0.42
SDF4-201ENST00000263741 TAL2Q16559 108 aa12.41□□□□□ -0.42
SDF4-201ENST00000263741 RAB37Q96AX2 223 aa12.41□□□□□ -0.42
SDF4-201ENST00000263741 SCGB3A1Q96QR1 104 aa12.41□□□□□ -0.42
SDF4-201ENST00000263741 GAGE6Q13070 117 aa12.4□□□□□ -0.42
SDF4-201ENST00000263741 TOMM6Q96B49 74 aa12.4□□□□□ -0.42
SDF4-201ENST00000263741 VPS25Q9BRG1 176 aa12.4□□□□□ -0.42
SDF4-201ENST00000263741 TMEM262E9PQX1 116 aa12.39□□□□□ -0.43
SDF4-201ENST00000263741 POLR2KP53803 58 aaKnown RBP12.39□□□□□ -0.43
SDF4-201ENST00000263741 SPCS1Q9Y6A9 102 aa12.39□□□□□ -0.43
SDF4-201ENST00000263741 LINC01549A6NIU2 74 aa12.39□□□□□ -0.43
SDF4-201ENST00000263741 TSHBP01222 138 aa12.39□□□□□ -0.43
SDF4-201ENST00000263741 I3L3M4 83 aa12.38□□□□□ -0.43
SDF4-201ENST00000263741 CEND1Q8N111 149 aa12.38□□□□□ -0.43
SDF4-201ENST00000263741 TMEM243Q9BU79 118 aa12.38□□□□□ -0.43
SDF4-201ENST00000263741 RTL8CO15255 209 aa12.38□□□□□ -0.43
SDF4-201ENST00000263741 C1orf134Q5TEV5 83 aa12.38□□□□□ -0.43
SDF4-201ENST00000263741 TM2D2Q9BX73 214 aa12.38□□□□□ -0.43
SDF4-201ENST00000263741 FXYD2P54710 66 aa12.37□□□□□ -0.43
SDF4-201ENST00000263741 C6orf223Q8N319 242 aa12.37□□□□□ -0.43
SDF4-201ENST00000263741 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
SDF4-201ENST00000263741 Q9HAA7 133 aa12.36□□□□□ -0.43
SDF4-201ENST00000263741 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.36□□□□□ -0.43
SDF4-201ENST00000263741 IGKV2-29A2NJV5 120 aaPredicted RBP12.36□□□□□ -0.43
SDF4-201ENST00000263741 TTTY13Q9BZ97 58 aa12.36□□□□□ -0.43
SDF4-201ENST00000263741 NAA38Q9BRA0 125 aaKnown RBP12.35□□□□□ -0.43
SDF4-201ENST00000263741 KLK12Q9UKR0 248 aa12.35□□□□□ -0.43
SDF4-201ENST00000263741 RPL32P62910 135 aaKnown RBP12.34□□□□□ -0.43
SDF4-201ENST00000263741 C2orf66Q6UXQ4 117 aa12.34□□□□□ -0.43
SDF4-201ENST00000263741 CHCHD7Q9BUK0 85 aa12.34□□□□□ -0.43
SDF4-201ENST00000263741 NHP2Q9NX24 153 aaKnown RBP12.34□□□□□ -0.43
SDF4-201ENST00000263741 FAT2Q9NYQ8 4349 aa12.34□□□□□ -0.43
SDF4-201ENST00000263741 DNAH17Q9UFH2 4485 aa12.34□□□□□ -0.43
SDF4-201ENST00000263741 VCYO14598 125 aa12.34□□□□□ -0.43
SDF4-201ENST00000263741 C10orf126Q8N4M7 172 aa12.34□□□□□ -0.43
SDF4-201ENST00000263741 UBE2L6O14933 153 aa12.33□□□□□ -0.44
SDF4-201ENST00000263741 CLPSL2Q6UWE3 100 aa12.33□□□□□ -0.44
SDF4-201ENST00000263741 HIST1H4GQ99525 98 aa12.33□□□□□ -0.44
SDF4-201ENST00000263741 MYMXA0A1B0GTQ4 84 aa12.32□□□□□ -0.44
SDF4-201ENST00000263741 IBA57-AS1B1ANH7 110 aa12.32□□□□□ -0.44
SDF4-201ENST00000263741 CYSLTR1Q9Y271 337 aa12.32□□□□□ -0.44
SDF4-201ENST00000263741 ANGP03950 147 aaKnown RBP12.31□□□□□ -0.44
SDF4-201ENST00000263741 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
SDF4-201ENST00000263741 KIR2DL4Q99706 377 aa12.31□□□□□ -0.44
SDF4-201ENST00000263741 IGLV4-60A0A075B6I1 120 aa12.31□□□□□ -0.44
SDF4-201ENST00000263741 PAPPA-AS1Q5QFB9 102 aa12.31□□□□□ -0.44
SDF4-201ENST00000263741 Q6ZRN7 208 aaPredicted RBP12.3□□□□□ -0.44
SDF4-201ENST00000263741 MAPKAPK5-AS1Q8N8E1 139 aa12.3□□□□□ -0.44
SDF4-201ENST00000263741 UBE2WQ96B02 151 aa12.3□□□□□ -0.44
SDF4-201ENST00000263741 E9PLD3 99 aa12.3□□□□□ -0.44
SDF4-201ENST00000263741 K7ERJ3 54 aa12.3□□□□□ -0.44
SDF4-201ENST00000263741 HERVK_113P61574 105 aa12.3□□□□□ -0.44
SDF4-201ENST00000263741 C20orf203Q8NBC4 194 aa12.29□□□□□ -0.44
SDF4-201ENST00000263741 TNP2Q05952 138 aa12.28□□□□□ -0.44
SDF4-201ENST00000263741 PRSS29PA6NIE9 313 aa12.28□□□□□ -0.44
SDF4-201ENST00000263741 LINC00269Q8N2A0 174 aa12.28□□□□□ -0.44
SDF4-201ENST00000263741 TMEM141Q96I45 108 aa12.28□□□□□ -0.44
SDF4-201ENST00000263741 ENHOQ6UWT2 76 aa12.26□□□□□ -0.45
SDF4-201ENST00000263741 RPL39P62891 51 aaKnown RBP12.26□□□□□ -0.45
SDF4-201ENST00000263741 CRPP02741 224 aa12.25□□□□□ -0.45
SDF4-201ENST00000263741 ZNF815PA8K554 130 aa12.25□□□□□ -0.45
SDF4-201ENST00000263741 TIMM17AQ99595 171 aa12.25□□□□□ -0.45
SDF4-201ENST00000263741 IGKV3OR2-268A0A0C4DH90 116 aa12.24□□□□□ -0.45
SDF4-201ENST00000263741 A0A1B0GUV1 79 aa12.24□□□□□ -0.45
SDF4-201ENST00000263741 PMVKQ15126 192 aa12.24□□□□□ -0.45
SDF4-201ENST00000263741 SCGB1D4Q6XE38 83 aa12.24□□□□□ -0.45
SDF4-201ENST00000263741 NFE4Q86UQ8 179 aa12.24□□□□□ -0.45
SDF4-201ENST00000263741 PKD1P98161 4303 aa12.24□□□□□ -0.45
SDF4-201ENST00000263741 IGKV2D-24A0A075B6R9 120 aa12.23□□□□□ -0.45
SDF4-201ENST00000263741 A0A1B0GWB2 263 aa12.23□□□□□ -0.45
SDF4-201ENST00000263741 EPPK1P58107 5090 aaKnown RBP12.23□□□□□ -0.45
SDF4-201ENST00000263741 TRAV8-3A0A0A6YYJ7 113 aa12.23□□□□□ -0.45
SDF4-201ENST00000263741 REG3AQ06141 175 aa12.23□□□□□ -0.45
SDF4-201ENST00000263741 LINC00336Q6ZUF6 198 aa12.23□□□□□ -0.45
SDF4-201ENST00000263741 IGLV10-54A0A075B6I4 117 aa12.22□□□□□ -0.45
SDF4-201ENST00000263741 H7C423 109 aa12.22□□□□□ -0.45
SDF4-201ENST00000263741 RNASE13Q5GAN3 156 aaKnown RBP12.22□□□□□ -0.45
SDF4-201ENST00000263741 PRR34Q9NV39 138 aa12.22□□□□□ -0.45
SDF4-201ENST00000263741 HECTD4Q9Y4D8 3996 aa12.22□□□□□ -0.45
SDF4-201ENST00000263741 F8W1H4 67 aa12.22□□□□□ -0.45
SDF4-201ENST00000263741 PSCAO43653 123 aa12.22□□□□□ -0.45
SDF4-201ENST00000263741 UBE2D4Q9Y2X8 147 aa12.22□□□□□ -0.45
SDF4-201ENST00000263741 IGIPA6NJ69 53 aa12.21□□□□□ -0.45
SDF4-201ENST00000263741 RPL24P83731 157 aaKnown RBP12.2□□□□□ -0.46
SDF4-201ENST00000263741 J3QR89 54 aa12.2□□□□□ -0.46
SDF4-201ENST00000263741 Q6ZUT4 128 aa12.2□□□□□ -0.46
SDF4-201ENST00000263741 TMEM101Q96IK0 257 aa12.2□□□□□ -0.46
SDF4-201ENST00000263741 LECT2O14960 151 aa12.19□□□□□ -0.46
SDF4-201ENST00000263741 SRSF9Q13242 221 aaKnown RBP eCLIP12.19□□□□□ -0.46
SDF4-201ENST00000263741 OPRPNQ99935 248 aaPredicted RBP12.19□□□□□ -0.46
SDF4-201ENST00000263741 DNAH11Q96DT5 4516 aa12.19□□□□□ -0.46
SDF4-201ENST00000263741 IGLV4-69A0A075B6H9 119 aa12.18□□□□□ -0.46
SDF4-201ENST00000263741 C11orf86A6NJI1 115 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 132.3 ms