RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 RBMY1EA6NEQ0 496 aaKnown RBP5.18□□□□□ -1.58
CSDE1-201ENST00000261443 K7ENP7 123 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 K7EQG2 157 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 LECT2O14960 151 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 RBMY1DP0C7P1 496 aaKnown RBP5.18□□□□□ -1.58
CSDE1-201ENST00000261443 PFN2P35080 140 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 PIMREGQ9BSJ6 248 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 SND1-IT1Q9HBX3 110 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 CFAP46Q8IYW2 2715 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 UCNP55089 124 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 BRD3OSQ6XYD6 125 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 WFDC9Q8NEX5 89 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 NF1P21359 2839 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 IGKV2-28A0A075B6P5 120 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 IGKV2D-28P01615 120 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 C20orf197Q8N268 126 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 MIR7-3HGQ8N6C7 128 aa5.18□□□□□ -1.58
CSDE1-201ENST00000261443 FAM236DA0A1B0GTK5 79 aa5.17□□□□□ -1.58
CSDE1-201ENST00000261443 SLPIP03973 132 aa5.17□□□□□ -1.58
CSDE1-201ENST00000261443 FAM236CP0DP71 79 aa5.17□□□□□ -1.58
CSDE1-201ENST00000261443 AKAP9Q99996 3911 aa5.17□□□□□ -1.58
CSDE1-201ENST00000261443 IGHV3-53P01767 116 aa5.17□□□□□ -1.58
CSDE1-201ENST00000261443 NBL1P41271 181 aa5.17□□□□□ -1.58
CSDE1-201ENST00000261443 BLCAPP62952 87 aa5.17□□□□□ -1.58
CSDE1-201ENST00000261443 S100A7L2Q5SY68 101 aa5.17□□□□□ -1.58
CSDE1-201ENST00000261443 PRO0628Q9UI54 55 aa5.17□□□□□ -1.58
CSDE1-201ENST00000261443 CCKP06307 115 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 RPL36AP83881 106 aaKnown RBP5.16□□□□□ -1.58
CSDE1-201ENST00000261443 RPL36ALQ969Q0 106 aaKnown RBP5.16□□□□□ -1.58
CSDE1-201ENST00000261443 IGLV1-40P01703 118 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 ZNF469Q96JG9 3925 aaPredicted RBP5.16□□□□□ -1.58
CSDE1-201ENST00000261443 CCL21O00585 134 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 XCL1P47992 114 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 LINC00158P58513 81 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 LMO4P61968 165 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 FBXL19-AS1Q494R0 122 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 LINC00336Q6ZUF6 198 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 FAM19A3Q7Z5A8 133 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 FAM19A1Q7Z5A9 133 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 ORMDL1Q9P0S3 153 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 XCL2Q9UBD3 114 aa5.16□□□□□ -1.58
CSDE1-201ENST00000261443 PIEZO1Q92508 2521 aa5.15□□□□□ -1.58
CSDE1-201ENST00000261443 H3BUX3 64 aa5.15□□□□□ -1.58
CSDE1-201ENST00000261443 ATP5EP2Q5VTU8 51 aa5.15□□□□□ -1.58
CSDE1-201ENST00000261443 ENHOQ6UWT2 76 aa5.15□□□□□ -1.58
CSDE1-201ENST00000261443 BPESC1Q9GZL8 116 aa5.15□□□□□ -1.58
CSDE1-201ENST00000261443 TOMM7Q9P0U1 55 aa5.15□□□□□ -1.59
CSDE1-201ENST00000261443 SERP1Q9Y6X1 66 aa5.15□□□□□ -1.59
CSDE1-201ENST00000261443 JMJD1CQ15652 2540 aa5.15□□□□□ -1.59
CSDE1-201ENST00000261443 A0A1W2PPR1 153 aa5.14□□□□□ -1.59
CSDE1-201ENST00000261443 Q96MF0 132 aa5.14□□□□□ -1.59
CSDE1-201ENST00000261443 C1orf43Q9BWL3 253 aa5.14□□□□□ -1.59
CSDE1-201ENST00000261443 NAV2Q8IVL1 2488 aa5.14□□□□□ -1.59
CSDE1-201ENST00000261443 CCL18P55774 89 aa5.14□□□□□ -1.59
CSDE1-201ENST00000261443 COX7B2Q8TF08 81 aa5.14□□□□□ -1.59
CSDE1-201ENST00000261443 EPG5Q9HCE0 2579 aa5.13□□□□□ -1.59
CSDE1-201ENST00000261443 PAX4O43316 350 aa5.13□□□□□ -1.59
CSDE1-201ENST00000261443 PSMB8P28062 276 aa5.13□□□□□ -1.59
CSDE1-201ENST00000261443 SS18Q15532 418 aa5.13□□□□□ -1.59
CSDE1-201ENST00000261443 CDC42SE2Q9NRR3 84 aa5.13□□□□□ -1.59
CSDE1-201ENST00000261443 A6NDX4 124 aa5.13□□□□□ -1.59
CSDE1-201ENST00000261443 J3QLI3 93 aa5.13□□□□□ -1.59
CSDE1-201ENST00000261443 ABCA2Q9BZC7 2435 aa5.13□□□□□ -1.59
CSDE1-201ENST00000261443 NOTCH2Q04721 2471 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 EPM2AB3EWF7 344 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 JMJD7-PLA2G4BH0Y9G9 81 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 H7BZZ5 65 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 DEFB131AP59861 70 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 CFHR3Q02985 330 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 UBL5Q9BZL1 73 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 PKD1L2Q7Z442 2459 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 MTORP42345 2549 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 ADORA2A-AS1P86434 159 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 NTM-AS1Q6ZSK4 140 aa5.12□□□□□ -1.59
CSDE1-201ENST00000261443 NBPF19A0A087WUL8 3843 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 MXRA5Q9NR99 2828 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 IGHV4-38-2P0DP08 117 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 LYPD5Q6UWN5 251 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 C11orf72Q8NBR9 251 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 PKIGQ9Y2B9 76 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 TRAV7A0A075B6U4 112 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 TRBV10-3A0A0K0K1G6 114 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 UBE2L6O14933 153 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 RPL35AP18077 110 aaKnown RBP5.11□□□□□ -1.59
CSDE1-201ENST00000261443 C10orf99Q6UWK7 81 aa5.11□□□□□ -1.59
CSDE1-201ENST00000261443 SMIM26A0A096LP01 95 aa5.1□□□□□ -1.59
CSDE1-201ENST00000261443 IGKV3OR2-268A0A0C4DH90 116 aa5.1□□□□□ -1.59
CSDE1-201ENST00000261443 IBA57-AS1B1ANH7 110 aa5.1□□□□□ -1.59
CSDE1-201ENST00000261443 TMEM256-PLSCR3K7ERE1 68 aa5.1□□□□□ -1.59
CSDE1-201ENST00000261443 WFDC11Q8NEX6 87 aa5.1□□□□□ -1.59
CSDE1-201ENST00000261443 TRBV6-4A0A1B0GX49 114 aa5.09□□□□□ -1.59
CSDE1-201ENST00000261443 RNASE1P07998 156 aaKnown RBP5.09□□□□□ -1.59
CSDE1-201ENST00000261443 ACANP16112 2415 aa5.09□□□□□ -1.59
CSDE1-201ENST00000261443 TMEM89A2RUT3 159 aa5.09□□□□□ -1.59
CSDE1-201ENST00000261443 SNURFQ9Y675 71 aa5.09□□□□□ -1.59
CSDE1-201ENST00000261443 TRGV1A0A0A0MS02 117 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 K7EQD1 137 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 FP248Q71RG6 208 aaPredicted RBP5.08□□□□□ -1.6
CSDE1-201ENST00000261443 Q8N814 137 aa5.08□□□□□ -1.6
CSDE1-201ENST00000261443 C16orf95Q9H693 158 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms