RNA–Protein interactions for RNA: ENST00000258909.13

TM6SF1-201, Transcript of transmembrane 6 superfamily member 1, humanhuman

TSL 1 (best)

Gene TM6SF1, Length 1,469 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM6SF1-201ENST00000258909 F8W036 122 aa11.77□□□□□ -0.52
TM6SF1-201ENST00000258909 RPL18AQ02543 176 aaKnown RBP11.77□□□□□ -0.52
TM6SF1-201ENST00000258909 SPINK6Q6UWN8 80 aa11.77□□□□□ -0.52
TM6SF1-201ENST00000258909 SMDT1Q9H4I9 107 aa11.77□□□□□ -0.52
TM6SF1-201ENST00000258909 S100A8P05109 93 aa11.76□□□□□ -0.53
TM6SF1-201ENST00000258909 SRSF9Q13242 221 aaKnown RBP eCLIP11.76□□□□□ -0.53
TM6SF1-201ENST00000258909 C9orf116Q5BN46 136 aaPredicted RBP11.76□□□□□ -0.53
TM6SF1-201ENST00000258909 ORAOV1Q8WV07 137 aa11.76□□□□□ -0.53
TM6SF1-201ENST00000258909 SPANXA1Q9NS26 97 aa11.75□□□□□ -0.53
TM6SF1-201ENST00000258909 IGHV3OR16-9A0A0B4J2B5 98 aa11.74□□□□□ -0.53
TM6SF1-201ENST00000258909 IFITM10A6NMD0 228 aa11.74□□□□□ -0.53
TM6SF1-201ENST00000258909 PPBPP02775 128 aa11.73□□□□□ -0.53
TM6SF1-201ENST00000258909 MRPS36P82909 103 aaKnown RBP11.73□□□□□ -0.53
TM6SF1-201ENST00000258909 REG3GQ6UW15 175 aa11.73□□□□□ -0.53
TM6SF1-201ENST00000258909 TMEM136Q6ZRR5 245 aa11.73□□□□□ -0.53
TM6SF1-201ENST00000258909 OR10D4PQ8NGN7 298 aa11.73□□□□□ -0.53
TM6SF1-201ENST00000258909 C10orf25Q5T742 122 aa11.72□□□□□ -0.53
TM6SF1-201ENST00000258909 PHF5AQ7RTV0 110 aaKnown RBP11.72□□□□□ -0.53
TM6SF1-201ENST00000258909 ORMDL3Q8N138 153 aa11.72□□□□□ -0.53
TM6SF1-201ENST00000258909 PRELID3AQ96N28 172 aa11.72□□□□□ -0.53
TM6SF1-201ENST00000258909 RAB5AP20339 215 aa11.71□□□□□ -0.53
TM6SF1-201ENST00000258909 PSORS1C2Q9UIG4 136 aa11.71□□□□□ -0.53
TM6SF1-201ENST00000258909 KRTAP10-8P60410 259 aa11.7□□□□□ -0.54
TM6SF1-201ENST00000258909 RNF151Q2KHN1 245 aa11.7□□□□□ -0.54
TM6SF1-201ENST00000258909 LOC389332A0A1B0GUA5 103 aa11.7□□□□□ -0.54
TM6SF1-201ENST00000258909 UNQ6190/PRO20217Q6UXQ8 127 aa11.7□□□□□ -0.54
TM6SF1-201ENST00000258909 ATP5L2Q7Z4Y8 100 aa11.7□□□□□ -0.54
TM6SF1-201ENST00000258909 MRPL35Q9NZE8 188 aaKnown RBP11.7□□□□□ -0.54
TM6SF1-201ENST00000258909 NDUFA1O15239 70 aa11.69□□□□□ -0.54
TM6SF1-201ENST00000258909 MT-ND6P03923 174 aa11.69□□□□□ -0.54
TM6SF1-201ENST00000258909 IFI27P40305 119 aaPredicted RBP11.69□□□□□ -0.54
TM6SF1-201ENST00000258909 FAM168BA1KXE4 195 aa11.68□□□□□ -0.54
TM6SF1-201ENST00000258909 C6orf48Q9UBA6 75 aa11.68□□□□□ -0.54
TM6SF1-201ENST00000258909 IGLV4-3A0A075B6K6 122 aa11.67□□□□□ -0.54
TM6SF1-201ENST00000258909 C1orf137Q5JT78 98 aa11.67□□□□□ -0.54
TM6SF1-201ENST00000258909 IMMP2LQ96T52 175 aa11.67□□□□□ -0.54
TM6SF1-201ENST00000258909 RNF213Q63HN8 5207 aa11.67□□□□□ -0.54
TM6SF1-201ENST00000258909 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
TM6SF1-201ENST00000258909 LINC00242Q5T6M2 205 aa11.66□□□□□ -0.54
TM6SF1-201ENST00000258909 GAGE2EQ4V326 116 aa11.65□□□□□ -0.54
TM6SF1-201ENST00000258909 ZC2HC1BQ5TFG8 222 aa11.65□□□□□ -0.54
TM6SF1-201ENST00000258909 GAGE2DQ9UEU5 116 aa11.65□□□□□ -0.54
TM6SF1-201ENST00000258909 PYGO1Q9Y3Y4 419 aa11.65□□□□□ -0.54
TM6SF1-201ENST00000258909 A0A087WZ39 114 aa11.64□□□□□ -0.55
TM6SF1-201ENST00000258909 F8WDY8 70 aa11.64□□□□□ -0.55
TM6SF1-201ENST00000258909 KIAA0087Q14695 138 aa11.64□□□□□ -0.55
TM6SF1-201ENST00000258909 TMEM141Q96I45 108 aa11.64□□□□□ -0.55
TM6SF1-201ENST00000258909 FAM19A5Q7Z5A7 132 aaPredicted RBP11.63□□□□□ -0.55
TM6SF1-201ENST00000258909 KRTAP11-1Q8IUC1 163 aa11.63□□□□□ -0.55
TM6SF1-201ENST00000258909 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
TM6SF1-201ENST00000258909 PRSS47A8MTI9 375 aa11.63□□□□□ -0.55
TM6SF1-201ENST00000258909 C2orf82Q6UX34 121 aa11.63□□□□□ -0.55
TM6SF1-201ENST00000258909 TLX1NBP0CAT3 122 aa11.62□□□□□ -0.55
TM6SF1-201ENST00000258909 TEX43Q6ZNM6 134 aa11.62□□□□□ -0.55
TM6SF1-201ENST00000258909 MT-ND4LP03901 98 aa11.61□□□□□ -0.55
TM6SF1-201ENST00000258909 UBE2D1P51668 147 aa11.61□□□□□ -0.55
TM6SF1-201ENST00000258909 PNRC1Q12796 327 aaPredicted RBP11.61□□□□□ -0.55
TM6SF1-201ENST00000258909 C2orf66Q6UXQ4 117 aa11.61□□□□□ -0.55
TM6SF1-201ENST00000258909 Q8N8P6 123 aa11.61□□□□□ -0.55
TM6SF1-201ENST00000258909 ANAPC16Q96DE5 110 aa11.61□□□□□ -0.55
TM6SF1-201ENST00000258909 LAMTOR2Q9Y2Q5 125 aa11.61□□□□□ -0.55
TM6SF1-201ENST00000258909 CYSLTR1Q9Y271 337 aa11.6□□□□□ -0.55
TM6SF1-201ENST00000258909 LINC00173Q6ZV60 143 aa11.59□□□□□ -0.55
TM6SF1-201ENST00000258909 KRTAP7-1Q8IUC3 87 aa11.59□□□□□ -0.55
TM6SF1-201ENST00000258909 IGLV7-43P04211 117 aa11.58□□□□□ -0.56
TM6SF1-201ENST00000258909 C2orf88Q9BSF0 95 aa11.58□□□□□ -0.56
TM6SF1-201ENST00000258909 RAB14P61106 215 aa11.57□□□□□ -0.56
TM6SF1-201ENST00000258909 Q6ZN92 141 aa11.57□□□□□ -0.56
TM6SF1-201ENST00000258909 VCX2Q9H322 139 aa11.57□□□□□ -0.56
TM6SF1-201ENST00000258909 AMELXQ99217 191 aa11.57□□□□□ -0.56
TM6SF1-201ENST00000258909 TRBV30A0A0K0K1B3 111 aa11.56□□□□□ -0.56
TM6SF1-201ENST00000258909 ORMDL2Q53FV1 153 aa11.56□□□□□ -0.56
TM6SF1-201ENST00000258909 PACRGQ96M98 296 aaPredicted RBP11.56□□□□□ -0.56
TM6SF1-201ENST00000258909 TOMM7Q9P0U1 55 aa11.56□□□□□ -0.56
TM6SF1-201ENST00000258909 IGIPA6NJ69 53 aa11.55□□□□□ -0.56
TM6SF1-201ENST00000258909 NDUFC2-KCTD14E9PQ53 114 aa11.55□□□□□ -0.56
TM6SF1-201ENST00000258909 M0QXV9 152 aa11.55□□□□□ -0.56
TM6SF1-201ENST00000258909 C9orf129Q5T035 196 aaKnown RBP11.55□□□□□ -0.56
TM6SF1-201ENST00000258909 CTDSP1Q9GZU7 261 aa11.55□□□□□ -0.56
TM6SF1-201ENST00000258909 DIRC1Q969H9 104 aa11.54□□□□□ -0.56
TM6SF1-201ENST00000258909 UBE2BP63146 152 aa11.53□□□□□ -0.56
TM6SF1-201ENST00000258909 LINC01561Q8N1V8 128 aa11.53□□□□□ -0.56
TM6SF1-201ENST00000258909 PRR26Q8N8Z3 221 aa11.53□□□□□ -0.56
TM6SF1-201ENST00000258909 PRSS2P07478 247 aa11.52□□□□□ -0.56
TM6SF1-201ENST00000258909 KIAA1644Q3SXP7 199 aa11.52□□□□□ -0.56
TM6SF1-201ENST00000258909 H0Y9J4 135 aa11.51□□□□□ -0.57
TM6SF1-201ENST00000258909 LINC00469Q8N7U9 141 aa11.51□□□□□ -0.57
TM6SF1-201ENST00000258909 NXT2Q9NPJ8 142 aaKnown RBP11.51□□□□□ -0.57
TM6SF1-201ENST00000258909 CKS1BP61024 79 aa11.51□□□□□ -0.57
TM6SF1-201ENST00000258909 C6orf226Q5I0X4 101 aa11.51□□□□□ -0.57
TM6SF1-201ENST00000258909 LPAP08519 4548 aa11.5□□□□□ -0.57
TM6SF1-201ENST00000258909 K7EMI3 77 aa11.5□□□□□ -0.57
TM6SF1-201ENST00000258909 ALKBH7Q9BT30 221 aaPredicted RBP11.5□□□□□ -0.57
TM6SF1-201ENST00000258909 CDKN2A-AS1Q9UH64 79 aa11.5□□□□□ -0.57
TM6SF1-201ENST00000258909 NPSP0C0P6 89 aa11.49□□□□□ -0.57
TM6SF1-201ENST00000258909 ADCYAP1P18509 176 aa11.49□□□□□ -0.57
TM6SF1-201ENST00000258909 FAM19A3Q7Z5A8 133 aa11.49□□□□□ -0.57
TM6SF1-201ENST00000258909 CLLU1Q5K131 121 aa11.48□□□□□ -0.57
TM6SF1-201ENST00000258909 Q8IZM0 81 aa11.48□□□□□ -0.57
TM6SF1-201ENST00000258909 XAGE1AQ9HD64 81 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms