RNA–Protein interactions for RNA: ENST00000252597.7

USHBP1-201, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USHBP1, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-201ENST00000252597 LST1O00453 97 aa8.65□□□□□ -1.03
USHBP1-201ENST00000252597 DEFB130BP0DP73 79 aa8.64□□□□□ -1.03
USHBP1-201ENST00000252597 DEFB130AP0DP74 79 aa8.64□□□□□ -1.03
USHBP1-201ENST00000252597 IGKV3D-7A0A0C4DH55 119 aa8.64□□□□□ -1.03
USHBP1-201ENST00000252597 TRGV4A0A0C4DH28 118 aa8.64□□□□□ -1.03
USHBP1-201ENST00000252597 SLPIP03973 132 aa8.64□□□□□ -1.03
USHBP1-201ENST00000252597 LINC00242Q5T6M2 205 aa8.64□□□□□ -1.03
USHBP1-201ENST00000252597 ZNF469Q96JG9 3925 aaPredicted RBP8.63□□□□□ -1.03
USHBP1-201ENST00000252597 KLK9Q2XQG4 91 aa8.63□□□□□ -1.03
USHBP1-201ENST00000252597 PEMTQ9UBM1 199 aa8.63□□□□□ -1.03
USHBP1-201ENST00000252597 CRPP02741 224 aa8.63□□□□□ -1.03
USHBP1-201ENST00000252597 SOSTDC1Q6X4U4 206 aa8.63□□□□□ -1.03
USHBP1-201ENST00000252597 MIR7-3HGQ8N6C7 128 aa8.63□□□□□ -1.03
USHBP1-201ENST00000252597 FAM104AQ969W3 186 aa8.63□□□□□ -1.03
USHBP1-201ENST00000252597 CITED2Q99967 270 aaPredicted RBP8.62□□□□□ -1.03
USHBP1-201ENST00000252597 PYGO1Q9Y3Y4 419 aa8.62□□□□□ -1.03
USHBP1-201ENST00000252597 H3BT86 120 aa8.62□□□□□ -1.03
USHBP1-201ENST00000252597 EDA2RQ9HAV5 297 aa8.62□□□□□ -1.03
USHBP1-201ENST00000252597 HERVK_113P63121 156 aa8.62□□□□□ -1.03
USHBP1-201ENST00000252597 MRPL23Q16540 153 aaKnown RBP8.62□□□□□ -1.03
USHBP1-201ENST00000252597 ESM1Q9NQ30 184 aa8.62□□□□□ -1.03
USHBP1-201ENST00000252597 C9orf153Q5TBE3 101 aa8.61□□□□□ -1.03
USHBP1-201ENST00000252597 SPANXDQ9BXN6 97 aa8.6□□□□□ -1.03
USHBP1-201ENST00000252597 ZNF702PQ9H963 129 aa8.6□□□□□ -1.03
USHBP1-201ENST00000252597 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
USHBP1-201ENST00000252597 SPANXCQ9NY87 97 aa8.6□□□□□ -1.03
USHBP1-201ENST00000252597 KLK5Q9Y337 293 aaPredicted RBP8.6□□□□□ -1.03
USHBP1-201ENST00000252597 TENM4Q6N022 2769 aa8.6□□□□□ -1.03
USHBP1-201ENST00000252597 SDIM1Q6ZPB5 146 aa8.59□□□□□ -1.03
USHBP1-201ENST00000252597 FAM218AQ96MZ4 157 aa8.59□□□□□ -1.03
USHBP1-201ENST00000252597 SND1-IT1Q9HBX3 110 aa8.59□□□□□ -1.03
USHBP1-201ENST00000252597 NDUFA1O15239 70 aa8.59□□□□□ -1.03
USHBP1-201ENST00000252597 XCL1P47992 114 aa8.59□□□□□ -1.03
USHBP1-201ENST00000252597 TMEM89A2RUT3 159 aa8.59□□□□□ -1.04
USHBP1-201ENST00000252597 SMIM1B2RUZ4 78 aa8.59□□□□□ -1.04
USHBP1-201ENST00000252597 COX7A2LO14548 114 aa8.58□□□□□ -1.04
USHBP1-201ENST00000252597 HIST1H4AP62805 103 aaKnown RBP8.58□□□□□ -1.04
USHBP1-201ENST00000252597 NBEAL1Q6ZS30 2694 aa8.58□□□□□ -1.04
USHBP1-201ENST00000252597 TMEM243Q9BU79 118 aa8.58□□□□□ -1.04
USHBP1-201ENST00000252597 LECT2O14960 151 aa8.57□□□□□ -1.04
USHBP1-201ENST00000252597 DEFB114Q30KQ6 69 aa8.57□□□□□ -1.04
USHBP1-201ENST00000252597 C6orf226Q5I0X4 101 aa8.57□□□□□ -1.04
USHBP1-201ENST00000252597 NTM-AS1Q6ZSK4 140 aa8.57□□□□□ -1.04
USHBP1-201ENST00000252597 UNC79Q9P2D8 2635 aa8.57□□□□□ -1.04
USHBP1-201ENST00000252597 KMT2BQ9UMN6 2715 aaPredicted RBP8.57□□□□□ -1.04
USHBP1-201ENST00000252597 IGLV10-54A0A075B6I4 117 aa8.57□□□□□ -1.04
USHBP1-201ENST00000252597 K7EQD1 137 aa8.57□□□□□ -1.04
USHBP1-201ENST00000252597 TIRAPP58753 221 aa8.57□□□□□ -1.04
USHBP1-201ENST00000252597 Q96MF0 132 aa8.57□□□□□ -1.04
USHBP1-201ENST00000252597 ODF3L2Q3SX64 289 aa8.56□□□□□ -1.04
USHBP1-201ENST00000252597 NCR3O14931 201 aa8.55□□□□□ -1.04
USHBP1-201ENST00000252597 PRR3P79522 188 aaKnown RBP8.55□□□□□ -1.04
USHBP1-201ENST00000252597 C1orf158Q8N1D5 194 aa8.55□□□□□ -1.04
USHBP1-201ENST00000252597 C11orf72Q8NBR9 251 aa8.55□□□□□ -1.04
USHBP1-201ENST00000252597 DEFB4AO15263 64 aa8.55□□□□□ -1.04
USHBP1-201ENST00000252597 SMCR5Q8TEV8 140 aa8.55□□□□□ -1.04
USHBP1-201ENST00000252597 A0A087WVE0 104 aa8.55□□□□□ -1.04
USHBP1-201ENST00000252597 BRI3O95415 125 aa8.54□□□□□ -1.04
USHBP1-201ENST00000252597 A0A087WYN8 130 aa8.54□□□□□ -1.04
USHBP1-201ENST00000252597 IGLV4-60A0A075B6I1 120 aa8.54□□□□□ -1.04
USHBP1-201ENST00000252597 VWFP04275 2813 aa8.53□□□□□ -1.04
USHBP1-201ENST00000252597 HTN3P15516 51 aa8.53□□□□□ -1.04
USHBP1-201ENST00000252597 COX7B2Q8TF08 81 aa8.53□□□□□ -1.04
USHBP1-201ENST00000252597 Q6YL49 198 aa8.53□□□□□ -1.04
USHBP1-201ENST00000252597 LINC00337Q8N6G1 96 aa8.53□□□□□ -1.04
USHBP1-201ENST00000252597 CDC42SE2Q9NRR3 84 aa8.53□□□□□ -1.04
USHBP1-201ENST00000252597 NOTCH1P46531 2555 aa8.53□□□□□ -1.04
USHBP1-201ENST00000252597 CCL24O00175 119 aa8.52□□□□□ -1.04
USHBP1-201ENST00000252597 WFDC9Q8NEX5 89 aa8.52□□□□□ -1.04
USHBP1-201ENST00000252597 WFDC11Q8NEX6 87 aa8.52□□□□□ -1.04
USHBP1-201ENST00000252597 C9orf129Q5T035 196 aaKnown RBP8.52□□□□□ -1.05
USHBP1-201ENST00000252597 DNAJC30Q96LL9 226 aa8.52□□□□□ -1.05
USHBP1-201ENST00000252597 MALP21145 153 aa8.52□□□□□ -1.05
USHBP1-201ENST00000252597 SMIM11BQ8TCY0 68 aa8.52□□□□□ -1.05
USHBP1-201ENST00000252597 COPS9Q8WXC6 57 aa8.52□□□□□ -1.05
USHBP1-201ENST00000252597 MAST4O15021 2626 aa8.51□□□□□ -1.05
USHBP1-201ENST00000252597 HIVEP1P15822 2718 aa8.51□□□□□ -1.05
USHBP1-201ENST00000252597 LINC00526Q96FQ7 95 aa8.51□□□□□ -1.05
USHBP1-201ENST00000252597 LOC107984640A0A0U1RRK4 108 aa8.51□□□□□ -1.05
USHBP1-201ENST00000252597 IGHV4-31P0DP07 118 aa8.5□□□□□ -1.05
USHBP1-201ENST00000252597 TRAV13-2A0A0B4J235 113 aa8.49□□□□□ -1.05
USHBP1-201ENST00000252597 hADV29S1A0JD25 119 aa8.49□□□□□ -1.05
USHBP1-201ENST00000252597 AKAP9Q99996 3911 aa8.49□□□□□ -1.05
USHBP1-201ENST00000252597 F8P00451 2351 aa8.49□□□□□ -1.05
USHBP1-201ENST00000252597 CCL18P55774 89 aa8.49□□□□□ -1.05
USHBP1-201ENST00000252597 DSCR9P59020 149 aa8.49□□□□□ -1.05
USHBP1-201ENST00000252597 LINC00643Q86TS7 51 aa8.49□□□□□ -1.05
USHBP1-201ENST00000252597 PDZD2O15018 2839 aa8.49□□□□□ -1.05
USHBP1-201ENST00000252597 A0A1B0GX51 115 aa8.49□□□□□ -1.05
USHBP1-201ENST00000252597 INAFM2P0DMQ5 153 aa8.48□□□□□ -1.05
USHBP1-201ENST00000252597 PPDPFQ9H3Y8 114 aa8.48□□□□□ -1.05
USHBP1-201ENST00000252597 TIMM17BO60830 172 aa8.48□□□□□ -1.05
USHBP1-201ENST00000252597 IGLV5-39A0A0G2JS06 123 aa8.47□□□□□ -1.05
USHBP1-201ENST00000252597 C4orf3Q8WVX3 66 aa8.47□□□□□ -1.05
USHBP1-201ENST00000252597 Q6Q795 121 aa8.47□□□□□ -1.05
USHBP1-201ENST00000252597 C9orf116Q5BN46 136 aaPredicted RBP8.46□□□□□ -1.05
USHBP1-201ENST00000252597 GYPEP15421 78 aa8.46□□□□□ -1.06
USHBP1-201ENST00000252597 A8MTW9 85 aa8.46□□□□□ -1.06
USHBP1-201ENST00000252597 M0QXV9 152 aa8.46□□□□□ -1.06
USHBP1-201ENST00000252597 SMR3AQ99954 134 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms