RNA–Protein interactions for RNA: ENST00000225655.5

PFN1-201, Transcript of profilin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-201ENST00000225655 URB1-AS1Q96HZ7 61 aa11.81□□□□□ -0.52
PFN1-201ENST00000225655 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.8□□□□□ -0.52
PFN1-201ENST00000225655 ATP5LO75964 103 aa11.8□□□□□ -0.52
PFN1-201ENST00000225655 OPRPNQ99935 248 aaPredicted RBP11.8□□□□□ -0.52
PFN1-201ENST00000225655 GAGE12HA6NDE8 117 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST1H2BKO60814 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 SERF1AO75920 110 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST1H2BJP06899 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST1H2BOP23527 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST1H2BBP33778 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 XCL1P47992 114 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST1H2BDP58876 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST1H2BCP62807 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 PMCHL1Q16048 86 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST2H2BEQ16778 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 C14orf177Q52M58 125 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST1H2BHQ93079 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST1H2BNQ99877 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 HIST1H2BMQ99879 126 aa11.79□□□□□ -0.52
PFN1-201ENST00000225655 FLG2Q5D862 2391 aaPredicted RBP11.79□□□□□ -0.52
PFN1-201ENST00000225655 CFAP161Q6P656 301 aa11.78□□□□□ -0.52
PFN1-201ENST00000225655 CD164L2Q6UWJ8 174 aa11.78□□□□□ -0.52
PFN1-201ENST00000225655 SEC11AP67812 179 aa11.77□□□□□ -0.53
PFN1-201ENST00000225655 AMELXQ99217 191 aa11.76□□□□□ -0.53
PFN1-201ENST00000225655 A0A096LNJ9 63 aa11.75□□□□□ -0.53
PFN1-201ENST00000225655 PDZD11Q5EBL8 140 aa11.75□□□□□ -0.53
PFN1-201ENST00000225655 COX7A2LO14548 114 aa11.74□□□□□ -0.53
PFN1-201ENST00000225655 MALP21145 153 aa11.74□□□□□ -0.53
PFN1-201ENST00000225655 PMVKQ15126 192 aa11.74□□□□□ -0.53
PFN1-201ENST00000225655 LINC01620Q4KN68 170 aa11.74□□□□□ -0.53
PFN1-201ENST00000225655 FAM104AQ969W3 186 aa11.74□□□□□ -0.53
PFN1-201ENST00000225655 USP17L23D6RBM5 183 aa11.73□□□□□ -0.53
PFN1-201ENST00000225655 PLA2G1BP04054 148 aaKnown RBP11.73□□□□□ -0.53
PFN1-201ENST00000225655 NDUFA6P56556 154 aa11.73□□□□□ -0.53
PFN1-201ENST00000225655 FOXI1Q12951 378 aa11.73□□□□□ -0.53
PFN1-201ENST00000225655 KRTAP26-1Q6PEX3 210 aa11.73□□□□□ -0.53
PFN1-201ENST00000225655 VPS13BQ7Z7G8 4022 aa11.73□□□□□ -0.53
PFN1-201ENST00000225655 HSPB8Q9UJY1 196 aa11.73□□□□□ -0.53
PFN1-201ENST00000225655 HERC1Q15751 4861 aa11.72□□□□□ -0.53
PFN1-201ENST00000225655 LEPROTL1O95214 131 aa11.72□□□□□ -0.53
PFN1-201ENST00000225655 UBE2D1P51668 147 aa11.72□□□□□ -0.53
PFN1-201ENST00000225655 LINC00528Q8N1L1 170 aa11.72□□□□□ -0.53
PFN1-201ENST00000225655 FAM19A2Q8N3H0 131 aa11.72□□□□□ -0.53
PFN1-201ENST00000225655 GEMIN7Q9H840 131 aaKnown RBP11.72□□□□□ -0.53
PFN1-201ENST00000225655 APOMO95445 188 aa11.71□□□□□ -0.53
PFN1-201ENST00000225655 PRSS1P07477 247 aa11.71□□□□□ -0.53
PFN1-201ENST00000225655 HERVK_113P63121 156 aa11.71□□□□□ -0.53
PFN1-201ENST00000225655 LINC00173Q6ZV60 143 aa11.71□□□□□ -0.53
PFN1-201ENST00000225655 SCXQ7RTU7 201 aa11.71□□□□□ -0.53
PFN1-201ENST00000225655 IFI27L1Q96BM0 104 aa11.71□□□□□ -0.53
PFN1-201ENST00000225655 CST9LQ9H4G1 147 aa11.71□□□□□ -0.53
PFN1-201ENST00000225655 IGHV1-58A0A0C4DH39 117 aa11.7□□□□□ -0.54
PFN1-201ENST00000225655 LINC00310P59036 64 aa11.7□□□□□ -0.54
PFN1-201ENST00000225655 LINC00242Q5T6M2 205 aa11.7□□□□□ -0.54
PFN1-201ENST00000225655 DNAH8Q96JB1 4490 aa11.69□□□□□ -0.54
PFN1-201ENST00000225655 ZC2HC1BQ5TFG8 222 aa11.69□□□□□ -0.54
PFN1-201ENST00000225655 CHAC1Q9BUX1 264 aa11.69□□□□□ -0.54
PFN1-201ENST00000225655 MYCBP2O75592 4640 aa11.69□□□□□ -0.54
PFN1-201ENST00000225655 hDV102S1A0JD36 115 aa11.68□□□□□ -0.54
PFN1-201ENST00000225655 COA6Q5JTJ3 125 aaKnown RBP11.68□□□□□ -0.54
PFN1-201ENST00000225655 FAM19A3Q7Z5A8 133 aa11.68□□□□□ -0.54
PFN1-201ENST00000225655 C5orf38Q86SI9 138 aa11.68□□□□□ -0.54
PFN1-201ENST00000225655 S100A6P06703 90 aa11.67□□□□□ -0.54
PFN1-201ENST00000225655 PACRGQ96M98 296 aaPredicted RBP11.67□□□□□ -0.54
PFN1-201ENST00000225655 IGHV3OR16-9A0A0B4J2B5 98 aa11.66□□□□□ -0.54
PFN1-201ENST00000225655 TINCRA0A1B0GVN0 87 aa11.66□□□□□ -0.54
PFN1-201ENST00000225655 NUPR1O60356 82 aa11.66□□□□□ -0.54
PFN1-201ENST00000225655 FABP4P15090 132 aa11.66□□□□□ -0.54
PFN1-201ENST00000225655 A0A087WZ39 114 aa11.65□□□□□ -0.54
PFN1-201ENST00000225655 TRAV12-1A0A0B4J245 112 aa11.65□□□□□ -0.54
PFN1-201ENST00000225655 A0A0J9YXV3 536 aa11.65□□□□□ -0.54
PFN1-201ENST00000225655 ZNF561-AS1K7EIQ3 104 aa11.65□□□□□ -0.54
PFN1-201ENST00000225655 LINC00469Q8N7U9 141 aa11.65□□□□□ -0.54
PFN1-201ENST00000225655 CIRBP-AS1Q8TBR5 109 aa11.65□□□□□ -0.54
PFN1-201ENST00000225655 GVQW2A0A096LPI5 108 aaPredicted RBP11.64□□□□□ -0.55
PFN1-201ENST00000225655 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.64□□□□□ -0.55
PFN1-201ENST00000225655 H3BRM9 83 aa11.64□□□□□ -0.55
PFN1-201ENST00000225655 LINC01561Q8N1V8 128 aa11.64□□□□□ -0.55
PFN1-201ENST00000225655 C15orf56Q8N910 161 aa11.64□□□□□ -0.55
PFN1-201ENST00000225655 OR10D4PQ8NGN7 298 aa11.64□□□□□ -0.55
PFN1-201ENST00000225655 MAP1LC3CQ9BXW4 147 aa11.64□□□□□ -0.55
PFN1-201ENST00000225655 CHTOPQ9Y3Y2 248 aaKnown RBP11.64□□□□□ -0.55
PFN1-201ENST00000225655 J3QL48 77 aa11.63□□□□□ -0.55
PFN1-201ENST00000225655 HIGD2BQ4VC39 106 aa11.63□□□□□ -0.55
PFN1-201ENST00000225655 H0Y8G0 127 aa11.62□□□□□ -0.55
PFN1-201ENST00000225655 IGLC3P0DOY3 106 aa11.62□□□□□ -0.55
PFN1-201ENST00000225655 COX6A2Q02221 97 aa11.62□□□□□ -0.55
PFN1-201ENST00000225655 ORAOV1Q8WV07 137 aa11.62□□□□□ -0.55
PFN1-201ENST00000225655 IGHV3-64A0A075B6Q5 118 aa11.61□□□□□ -0.55
PFN1-201ENST00000225655 KRTAP29-1A8MX34 341 aaPredicted RBP11.61□□□□□ -0.55
PFN1-201ENST00000225655 KRTAP10-4P60372 401 aaPredicted RBP11.61□□□□□ -0.55
PFN1-201ENST00000225655 SPAG11BQ08648 103 aa11.61□□□□□ -0.55
PFN1-201ENST00000225655 F8VRH5 84 aa11.6□□□□□ -0.55
PFN1-201ENST00000225655 PRSS2P07478 247 aa11.6□□□□□ -0.55
PFN1-201ENST00000225655 S100A2P29034 98 aa11.6□□□□□ -0.55
PFN1-201ENST00000225655 CDKN2A-AS1Q9UH64 79 aa11.6□□□□□ -0.55
PFN1-201ENST00000225655 IGLV5-45A0A087WSX0 123 aa11.59□□□□□ -0.55
PFN1-201ENST00000225655 CNBPP62633 177 aaKnown RBP11.59□□□□□ -0.55
PFN1-201ENST00000225655 PKIGQ9Y2B9 76 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms