RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 COX6A2Q02221 97 aa9.36□□□□□ -0.91
SEC61B-201ENST00000223641 C1orf43Q9BWL3 253 aa9.36□□□□□ -0.91
SEC61B-201ENST00000223641 Q9HAA7 133 aa9.36□□□□□ -0.91
SEC61B-201ENST00000223641 FOXI1Q12951 378 aa9.35□□□□□ -0.91
SEC61B-201ENST00000223641 Q6ZRN7 208 aaPredicted RBP9.35□□□□□ -0.91
SEC61B-201ENST00000223641 RMI2Q96E14 147 aa9.35□□□□□ -0.91
SEC61B-201ENST00000223641 COX11Q9Y6N1 276 aa9.35□□□□□ -0.91
SEC61B-201ENST00000223641 KMT2CQ8NEZ4 4911 aaKnown RBP9.34□□□□□ -0.91
SEC61B-201ENST00000223641 IGKV2D-24A0A075B6R9 120 aa9.34□□□□□ -0.91
SEC61B-201ENST00000223641 C11orf86A6NJI1 115 aa9.34□□□□□ -0.91
SEC61B-201ENST00000223641 XCL1P47992 114 aa9.34□□□□□ -0.91
SEC61B-201ENST00000223641 C6orf223Q8N319 242 aa9.33□□□□□ -0.92
SEC61B-201ENST00000223641 MAPKAPK5-AS1Q8N8E1 139 aa9.33□□□□□ -0.92
SEC61B-201ENST00000223641 PMCHL2Q9BQD1 86 aa9.33□□□□□ -0.92
SEC61B-201ENST00000223641 CHAC1Q9BUX1 264 aa9.33□□□□□ -0.92
SEC61B-201ENST00000223641 TM2D2Q9BX73 214 aa9.33□□□□□ -0.92
SEC61B-201ENST00000223641 CDKN2A-AS1Q9UH64 79 aa9.33□□□□□ -0.92
SEC61B-201ENST00000223641 A0A087WZ39 114 aa9.32□□□□□ -0.92
SEC61B-201ENST00000223641 GAGE12HA6NDE8 117 aa9.32□□□□□ -0.92
SEC61B-201ENST00000223641 DPM2O94777 84 aa9.32□□□□□ -0.92
SEC61B-201ENST00000223641 ZNF22P17026 224 aaPredicted RBP9.32□□□□□ -0.92
SEC61B-201ENST00000223641 PLNP26678 52 aa9.32□□□□□ -0.92
SEC61B-201ENST00000223641 LINC01561Q8N1V8 128 aa9.32□□□□□ -0.92
SEC61B-201ENST00000223641 GEMIN7Q9H840 131 aaKnown RBP9.32□□□□□ -0.92
SEC61B-201ENST00000223641 LOC105371267A0A1B0GV96 52 aa9.31□□□□□ -0.92
SEC61B-201ENST00000223641 C20orf202A1L168 122 aa9.31□□□□□ -0.92
SEC61B-201ENST00000223641 IGKCP01834 107 aa9.31□□□□□ -0.92
SEC61B-201ENST00000223641 JOSD1Q15040 202 aaPredicted RBP9.31□□□□□ -0.92
SEC61B-201ENST00000223641 DNAH17Q9UFH2 4485 aa9.31□□□□□ -0.92
SEC61B-201ENST00000223641 AKR1D1P51857 326 aa9.3□□□□□ -0.92
SEC61B-201ENST00000223641 C1orf134Q5TEV5 83 aa9.3□□□□□ -0.92
SEC61B-201ENST00000223641 FRAS1Q86XX4 4008 aa9.3□□□□□ -0.92
SEC61B-201ENST00000223641 COX7A2LO14548 114 aa9.29□□□□□ -0.92
SEC61B-201ENST00000223641 C5orf38Q86SI9 138 aa9.29□□□□□ -0.92
SEC61B-201ENST00000223641 LINC00469Q8N7U9 141 aa9.29□□□□□ -0.92
SEC61B-201ENST00000223641 TMEM223A0PJW6 202 aa9.27□□□□□ -0.93
SEC61B-201ENST00000223641 H3BRM9 83 aa9.27□□□□□ -0.93
SEC61B-201ENST00000223641 SCGB1D1O95968 90 aa9.27□□□□□ -0.93
SEC61B-201ENST00000223641 PYY3Q5JQD4 70 aa9.27□□□□□ -0.93
SEC61B-201ENST00000223641 TMEM170BQ5T4T1 132 aa9.27□□□□□ -0.93
SEC61B-201ENST00000223641 IGHV3-64A0A075B6Q5 118 aa9.26□□□□□ -0.93
SEC61B-201ENST00000223641 IGLV5-39A0A0G2JS06 123 aa9.26□□□□□ -0.93
SEC61B-201ENST00000223641 LRCOL1A6NCL2 159 aa9.26□□□□□ -0.93
SEC61B-201ENST00000223641 SMIM1B2RUZ4 78 aa9.26□□□□□ -0.93
SEC61B-201ENST00000223641 RTL8CO15255 209 aa9.26□□□□□ -0.93
SEC61B-201ENST00000223641 C15orf56Q8N910 161 aa9.26□□□□□ -0.93
SEC61B-201ENST00000223641 RYR2Q92736 4967 aa9.25□□□□□ -0.93
SEC61B-201ENST00000223641 IGHV1-58A0A0C4DH39 117 aa9.25□□□□□ -0.93
SEC61B-201ENST00000223641 PSCAO43653 123 aa9.25□□□□□ -0.93
SEC61B-201ENST00000223641 APOMO95445 188 aa9.24□□□□□ -0.93
SEC61B-201ENST00000223641 SPINK8P0C7L1 97 aa9.24□□□□□ -0.93
SEC61B-201ENST00000223641 MALP21145 153 aa9.24□□□□□ -0.93
SEC61B-201ENST00000223641 CFAP161Q6P656 301 aa9.24□□□□□ -0.93
SEC61B-201ENST00000223641 ATOH7Q8N100 152 aa9.24□□□□□ -0.93
SEC61B-201ENST00000223641 FAT2Q9NYQ8 4349 aa9.24□□□□□ -0.93
SEC61B-201ENST00000223641 GVQW2A0A096LPI5 108 aaPredicted RBP9.23□□□□□ -0.93
SEC61B-201ENST00000223641 USP17L23D6RBM5 183 aa9.23□□□□□ -0.93
SEC61B-201ENST00000223641 WFDC2Q14508 124 aa9.23□□□□□ -0.93
SEC61B-201ENST00000223641 KIAA0087Q14695 138 aa9.23□□□□□ -0.93
SEC61B-201ENST00000223641 STPG4Q8N801 248 aa9.23□□□□□ -0.93
SEC61B-201ENST00000223641 E9PLD3 99 aa9.22□□□□□ -0.93
SEC61B-201ENST00000223641 Q8IZM0 81 aa9.22□□□□□ -0.93
SEC61B-201ENST00000223641 A0A087WTM6 91 aa9.21□□□□□ -0.94
SEC61B-201ENST00000223641 HERVK_113P61574 105 aa9.21□□□□□ -0.94
SEC61B-201ENST00000223641 ORAOV1Q8WV07 137 aa9.21□□□□□ -0.94
SEC61B-201ENST00000223641 hDV102S1A0JD36 115 aa9.2□□□□□ -0.94
SEC61B-201ENST00000223641 LECT2O14960 151 aa9.2□□□□□ -0.94
SEC61B-201ENST00000223641 MAJINQ3KP22 176 aa9.2□□□□□ -0.94
SEC61B-201ENST00000223641 ANKRD39Q53RE8 183 aa9.2□□□□□ -0.94
SEC61B-201ENST00000223641 LEPROTO15243 131 aa9.19□□□□□ -0.94
SEC61B-201ENST00000223641 TNP2Q05952 138 aa9.19□□□□□ -0.94
SEC61B-201ENST00000223641 C14orf177Q52M58 125 aa9.19□□□□□ -0.94
SEC61B-201ENST00000223641 CDPF1Q6NVV7 123 aa9.19□□□□□ -0.94
SEC61B-201ENST00000223641 COX7B2Q8TF08 81 aa9.19□□□□□ -0.94
SEC61B-201ENST00000223641 NTN5Q8WTR8 489 aaPredicted RBP9.19□□□□□ -0.94
SEC61B-201ENST00000223641 DNAH11Q96DT5 4516 aa9.19□□□□□ -0.94
SEC61B-201ENST00000223641 IGKV2D-26A0A0A0MRZ7 120 aa9.18□□□□□ -0.94
SEC61B-201ENST00000223641 F8WDY8 70 aa9.18□□□□□ -0.94
SEC61B-201ENST00000223641 ZNF561-AS1K7EIQ3 104 aa9.18□□□□□ -0.94
SEC61B-201ENST00000223641 SPAG11BQ08648 103 aa9.18□□□□□ -0.94
SEC61B-201ENST00000223641 HIGD2BQ4VC39 106 aa9.18□□□□□ -0.94
SEC61B-201ENST00000223641 PLEKHB2Q96CS7 222 aa9.18□□□□□ -0.94
SEC61B-201ENST00000223641 C2orf48Q96LS8 159 aa9.18□□□□□ -0.94
SEC61B-201ENST00000223641 PKD1P98161 4303 aa9.17□□□□□ -0.94
SEC61B-201ENST00000223641 J3QQQ9 107 aa9.17□□□□□ -0.94
SEC61B-201ENST00000223641 SLPIP03973 132 aa9.17□□□□□ -0.94
SEC61B-201ENST00000223641 SMIM6P0DI80 62 aa9.17□□□□□ -0.94
SEC61B-201ENST00000223641 TSPEAR-AS2P59090 65 aa9.17□□□□□ -0.94
SEC61B-201ENST00000223641 C6orf226Q5I0X4 101 aa9.17□□□□□ -0.94
SEC61B-201ENST00000223641 LINC00336Q6ZUF6 198 aa9.17□□□□□ -0.94
SEC61B-201ENST00000223641 Q8N814 137 aa9.17□□□□□ -0.94
SEC61B-201ENST00000223641 TOMM7Q9P0U1 55 aa9.17□□□□□ -0.94
SEC61B-201ENST00000223641 RYR3Q15413 4870 aa9.16□□□□□ -0.94
SEC61B-201ENST00000223641 HSBP1L1C9JCN9 74 aa9.16□□□□□ -0.94
SEC61B-201ENST00000223641 PRSS2P07478 247 aa9.16□□□□□ -0.94
SEC61B-201ENST00000223641 CXCL5P42830 114 aa9.16□□□□□ -0.94
SEC61B-201ENST00000223641 LINC00526Q96FQ7 95 aa9.16□□□□□ -0.94
SEC61B-201ENST00000223641 HECTD4Q9Y4D8 3996 aa9.15□□□□□ -0.94
SEC61B-201ENST00000223641 CNBPP62633 177 aaKnown RBP9.15□□□□□ -0.94
SEC61B-201ENST00000223641 ZNF625Q96I27 306 aaPredicted RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms