RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PRSS3P2Q8NHM4 247 aa8.17□□□□□ -1.1
LSM5-201ENST00000223084 CYSLTR1Q9Y271 337 aa8.17□□□□□ -1.1
LSM5-201ENST00000223084 PYGO1Q9Y3Y4 419 aa8.17□□□□□ -1.1
LSM5-201ENST00000223084 TRAPPC1Q9Y5R8 145 aa8.17□□□□□ -1.1
LSM5-201ENST00000223084 COX7A2LO14548 114 aa8.16□□□□□ -1.1
LSM5-201ENST00000223084 GHRHP01286 108 aa8.16□□□□□ -1.1
LSM5-201ENST00000223084 SDIM1Q6ZPB5 146 aa8.16□□□□□ -1.1
LSM5-201ENST00000223084 TMEM141Q96I45 108 aa8.16□□□□□ -1.1
LSM5-201ENST00000223084 PANO1I0J062 215 aa8.15□□□□□ -1.1
LSM5-201ENST00000223084 K7EMI3 77 aa8.15□□□□□ -1.1
LSM5-201ENST00000223084 MALP21145 153 aa8.15□□□□□ -1.1
LSM5-201ENST00000223084 SCXQ7RTU7 201 aa8.15□□□□□ -1.1
LSM5-201ENST00000223084 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.15□□□□□ -1.1
LSM5-201ENST00000223084 IGHV3-64A0A075B6Q5 118 aa8.14□□□□□ -1.11
LSM5-201ENST00000223084 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.14□□□□□ -1.11
LSM5-201ENST00000223084 IGIPA6NJ69 53 aa8.14□□□□□ -1.11
LSM5-201ENST00000223084 COLCA2A8K830 154 aa8.14□□□□□ -1.11
LSM5-201ENST00000223084 EPM2AB3EWF7 344 aa8.14□□□□□ -1.11
LSM5-201ENST00000223084 Q5VSD8 79 aa8.14□□□□□ -1.11
LSM5-201ENST00000223084 CHAC1Q9BUX1 264 aa8.14□□□□□ -1.11
LSM5-201ENST00000223084 TEX43Q6ZNM6 134 aa8.13□□□□□ -1.11
LSM5-201ENST00000223084 LINC00173Q6ZV60 143 aa8.13□□□□□ -1.11
LSM5-201ENST00000223084 FA2HQ7L5A8 372 aa8.13□□□□□ -1.11
LSM5-201ENST00000223084 CIRBP-AS1Q8TBR5 109 aa8.13□□□□□ -1.11
LSM5-201ENST00000223084 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
LSM5-201ENST00000223084 IGHV3OR16-9A0A0B4J2B5 98 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 LINC01546A6NGU7 62 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 ZNF561-AS1K7EIQ3 104 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 CHTF8P0CG12 524 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 COX6A2Q02221 97 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 LINC00242Q5T6M2 205 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 LCE2CQ5TA81 110 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 Q6ZN92 141 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 AMELXQ99217 191 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 VCX2Q9H322 139 aa8.12□□□□□ -1.11
LSM5-201ENST00000223084 IGLV4-69A0A075B6H9 119 aa8.11□□□□□ -1.11
LSM5-201ENST00000223084 G0S2P27469 103 aa8.11□□□□□ -1.11
LSM5-201ENST00000223084 UBE2D1P51668 147 aa8.11□□□□□ -1.11
LSM5-201ENST00000223084 C18orf32Q8TCD1 76 aa8.11□□□□□ -1.11
LSM5-201ENST00000223084 SCGB3A1Q96QR1 104 aa8.11□□□□□ -1.11
LSM5-201ENST00000223084 C2orf88Q9BSF0 95 aa8.11□□□□□ -1.11
LSM5-201ENST00000223084 HERC1Q15751 4861 aa8.11□□□□□ -1.11
LSM5-201ENST00000223084 FAM229AH3BQW9 127 aa8.1□□□□□ -1.11
LSM5-201ENST00000223084 APOMO95445 188 aa8.1□□□□□ -1.11
LSM5-201ENST00000223084 SYCNQ0VAF6 134 aa8.1□□□□□ -1.11
LSM5-201ENST00000223084 URB1-AS1Q96HZ7 61 aa8.1□□□□□ -1.11
LSM5-201ENST00000223084 CARD19Q96LW7 228 aa8.1□□□□□ -1.11
LSM5-201ENST00000223084 TIMM17AQ99595 171 aa8.1□□□□□ -1.11
LSM5-201ENST00000223084 VPS13BQ7Z7G8 4022 aa8.1□□□□□ -1.11
LSM5-201ENST00000223084 NPSP0C0P6 89 aa8.09□□□□□ -1.11
LSM5-201ENST00000223084 SPAG11BQ08648 103 aa8.09□□□□□ -1.11
LSM5-201ENST00000223084 Q6ZRU5 148 aa8.09□□□□□ -1.11
LSM5-201ENST00000223084 ERASQ7Z444 233 aa8.09□□□□□ -1.11
LSM5-201ENST00000223084 ORAOV1Q8WV07 137 aa8.09□□□□□ -1.11
LSM5-201ENST00000223084 CIRBPQ14011 172 aaKnown RBP8.08□□□□□ -1.12
LSM5-201ENST00000223084 DPH3Q96FX2 82 aa8.08□□□□□ -1.12
LSM5-201ENST00000223084 CAMK2N2Q96S95 79 aa8.08□□□□□ -1.12
LSM5-201ENST00000223084 UBR4Q5T4S7 5183 aa8.08□□□□□ -1.12
LSM5-201ENST00000223084 A0A087WZ39 114 aa8.07□□□□□ -1.12
LSM5-201ENST00000223084 A0A096LNJ9 63 aa8.07□□□□□ -1.12
LSM5-201ENST00000223084 IGKV2-24A0A0C4DH68 120 aa8.07□□□□□ -1.12
LSM5-201ENST00000223084 LINC00614P0C842 121 aa8.07□□□□□ -1.12
LSM5-201ENST00000223084 PMCHL1Q16048 86 aa8.07□□□□□ -1.12
LSM5-201ENST00000223084 PAPPA-AS1Q5QFB9 102 aa8.07□□□□□ -1.12
LSM5-201ENST00000223084 OR10D4PQ8NGN7 298 aa8.07□□□□□ -1.12
LSM5-201ENST00000223084 SPACA4Q8TDM5 124 aa8.07□□□□□ -1.12
LSM5-201ENST00000223084 A0A087WYN8 130 aa8.06□□□□□ -1.12
LSM5-201ENST00000223084 A0A096LNI7 61 aa8.06□□□□□ -1.12
LSM5-201ENST00000223084 TRGC2P03986 189 aa8.06□□□□□ -1.12
LSM5-201ENST00000223084 MAJINQ3KP22 176 aa8.06□□□□□ -1.12
LSM5-201ENST00000223084 C2orf48Q96LS8 159 aa8.06□□□□□ -1.12
LSM5-201ENST00000223084 DMBT1Q9UGM3 2413 aaPredicted RBP8.05□□□□□ -1.12
LSM5-201ENST00000223084 A0A0J9YXV3 536 aa8.05□□□□□ -1.12
LSM5-201ENST00000223084 FAM19A3Q7Z5A8 133 aa8.05□□□□□ -1.12
LSM5-201ENST00000223084 FLG2Q5D862 2391 aaPredicted RBP8.05□□□□□ -1.12
LSM5-201ENST00000223084 LINC01549A6NIU2 74 aa8.04□□□□□ -1.12
LSM5-201ENST00000223084 INAFM2P0DMQ5 153 aa8.04□□□□□ -1.12
LSM5-201ENST00000223084 KIAA0087Q14695 138 aa8.04□□□□□ -1.12
LSM5-201ENST00000223084 C10orf25Q5T742 122 aa8.04□□□□□ -1.12
LSM5-201ENST00000223084 CST9LQ9H4G1 147 aa8.04□□□□□ -1.12
LSM5-201ENST00000223084 SRRM2Q9UQ35 2752 aaKnown RBP8.04□□□□□ -1.12
LSM5-201ENST00000223084 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.03□□□□□ -1.12
LSM5-201ENST00000223084 PLA2G1BP04054 148 aaKnown RBP8.03□□□□□ -1.12
LSM5-201ENST00000223084 RAB5BP61020 215 aa8.03□□□□□ -1.12
LSM5-201ENST00000223084 UNQ6190/PRO20217Q6UXQ8 127 aa8.03□□□□□ -1.12
LSM5-201ENST00000223084 GEMIN7Q9H840 131 aaKnown RBP8.03□□□□□ -1.12
LSM5-201ENST00000223084 CDKN2A-AS1Q9UH64 79 aa8.03□□□□□ -1.12
LSM5-201ENST00000223084 LOC107984640A0A0U1RRK4 108 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 NDUFA1O15239 70 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 HBDP02042 147 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 HERVK_113P63121 156 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 SEC11AP67812 179 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 GAGE2BQ13066 116 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 C2orf82Q6UX34 121 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 LINC01561Q8N1V8 128 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 STPG4Q8N801 248 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 PLAC8Q9NZF1 115 aa8.02□□□□□ -1.13
LSM5-201ENST00000223084 PTTG1IPP53801 180 aa8.01□□□□□ -1.13
LSM5-201ENST00000223084 NDUFA6P56556 154 aa8.01□□□□□ -1.13
LSM5-201ENST00000223084 KRTAP10-4P60372 401 aaPredicted RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms