RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 KRTAP26-1Q6PEX3 210 aa10.9□□□□□ -0.66
LIM2-201ENST00000221973 HSPB8Q9UJY1 196 aa10.9□□□□□ -0.66
LIM2-201ENST00000221973 COX11Q9Y6N1 276 aa10.9□□□□□ -0.66
LIM2-201ENST00000221973 GAGE12HA6NDE8 117 aa10.89□□□□□ -0.67
LIM2-201ENST00000221973 C16orf90A8MZG2 172 aa10.89□□□□□ -0.67
LIM2-201ENST00000221973 CDK2AP2O75956 126 aa10.89□□□□□ -0.67
LIM2-201ENST00000221973 PRSS1P07477 247 aa10.89□□□□□ -0.67
LIM2-201ENST00000221973 UBE2D1P51668 147 aa10.89□□□□□ -0.67
LIM2-201ENST00000221973 PMVKQ15126 192 aa10.89□□□□□ -0.67
LIM2-201ENST00000221973 CST9LQ9H4G1 147 aa10.89□□□□□ -0.67
LIM2-201ENST00000221973 MAPKAPK5-AS1Q8N8E1 139 aa10.88□□□□□ -0.67
LIM2-201ENST00000221973 TMA7Q9Y2S6 64 aaKnown RBP10.87□□□□□ -0.67
LIM2-201ENST00000221973 H0Y8G0 127 aa10.86□□□□□ -0.67
LIM2-201ENST00000221973 SNRPEP62304 92 aaKnown RBP10.86□□□□□ -0.67
LIM2-201ENST00000221973 FOXI1Q12951 378 aa10.86□□□□□ -0.67
LIM2-201ENST00000221973 LINC00242Q5T6M2 205 aa10.86□□□□□ -0.67
LIM2-201ENST00000221973 CD164L2Q6UWJ8 174 aa10.86□□□□□ -0.67
LIM2-201ENST00000221973 HIST3H2BBQ8N257 126 aa10.86□□□□□ -0.67
LIM2-201ENST00000221973 A0A0J9YXV3 536 aa10.85□□□□□ -0.67
LIM2-201ENST00000221973 COX6A2Q02221 97 aa10.85□□□□□ -0.67
LIM2-201ENST00000221973 LECT2O14960 151 aa10.84□□□□□ -0.67
LIM2-201ENST00000221973 S100A2P29034 98 aa10.84□□□□□ -0.67
LIM2-201ENST00000221973 KRTAP10-2P60368 255 aa10.84□□□□□ -0.67
LIM2-201ENST00000221973 PACRGQ96M98 296 aaPredicted RBP10.84□□□□□ -0.67
LIM2-201ENST00000221973 MAP1LC3CQ9BXW4 147 aa10.84□□□□□ -0.67
LIM2-201ENST00000221973 SPATA12Q7Z6I5 190 aa10.83□□□□□ -0.68
LIM2-201ENST00000221973 C5orf38Q86SI9 138 aa10.83□□□□□ -0.68
LIM2-201ENST00000221973 GEMIN7Q9H840 131 aaKnown RBP10.83□□□□□ -0.68
LIM2-201ENST00000221973 CHTOPQ9Y3Y2 248 aaKnown RBP10.83□□□□□ -0.68
LIM2-201ENST00000221973 TRAV12-1A0A0B4J245 112 aa10.82□□□□□ -0.68
LIM2-201ENST00000221973 C5orf52A6NGY3 159 aa10.82□□□□□ -0.68
LIM2-201ENST00000221973 COX7A2LO14548 114 aa10.82□□□□□ -0.68
LIM2-201ENST00000221973 SEC11AP67812 179 aa10.82□□□□□ -0.68
LIM2-201ENST00000221973 WFDC2Q14508 124 aa10.82□□□□□ -0.68
LIM2-201ENST00000221973 FAM19A3Q7Z5A8 133 aa10.82□□□□□ -0.68
LIM2-201ENST00000221973 IGHV3OR16-9A0A0B4J2B5 98 aa10.81□□□□□ -0.68
LIM2-201ENST00000221973 TINCRA0A1B0GVN0 87 aa10.81□□□□□ -0.68
LIM2-201ENST00000221973 LRCOL1A6NCL2 159 aa10.81□□□□□ -0.68
LIM2-201ENST00000221973 HERVK_113P63121 156 aa10.81□□□□□ -0.68
LIM2-201ENST00000221973 HIST1H2BLQ99880 126 aa10.81□□□□□ -0.68
LIM2-201ENST00000221973 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
LIM2-201ENST00000221973 A0A087WTM6 91 aa10.8□□□□□ -0.68
LIM2-201ENST00000221973 USP17L23D6RBM5 183 aa10.8□□□□□ -0.68
LIM2-201ENST00000221973 MALP21145 153 aa10.8□□□□□ -0.68
LIM2-201ENST00000221973 MRPL35Q9NZE8 188 aaKnown RBP10.8□□□□□ -0.68
LIM2-201ENST00000221973 SYS1-DBNDD2H3BUS1 97 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 C3orf79P0CE67 100 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 IGLC3P0DOY3 106 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 KRTDAPP60985 99 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 ODF1Q14990 250 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 Q8N1X5 172 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 LINC00469Q8N7U9 141 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 CDKN2A-AS1Q9UH64 79 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 HERC1Q15751 4861 aa10.79□□□□□ -0.68
LIM2-201ENST00000221973 F8VRH5 84 aa10.78□□□□□ -0.68
LIM2-201ENST00000221973 PMCHL2Q9BQD1 86 aa10.78□□□□□ -0.68
LIM2-201ENST00000221973 FAT1Q14517 4588 aa10.78□□□□□ -0.68
LIM2-201ENST00000221973 A0A087WZ39 114 aa10.77□□□□□ -0.69
LIM2-201ENST00000221973 C11orf86A6NJI1 115 aa10.77□□□□□ -0.69
LIM2-201ENST00000221973 CFAP161Q6P656 301 aa10.77□□□□□ -0.69
LIM2-201ENST00000221973 C15orf56Q8N910 161 aa10.77□□□□□ -0.69
LIM2-201ENST00000221973 IGHV1-58A0A0C4DH39 117 aa10.76□□□□□ -0.69
LIM2-201ENST00000221973 EREGO14944 169 aa10.76□□□□□ -0.69
LIM2-201ENST00000221973 HIGD2BQ4VC39 106 aa10.76□□□□□ -0.69
LIM2-201ENST00000221973 PET117Q6UWS5 81 aa10.76□□□□□ -0.69
LIM2-201ENST00000221973 IGLV5-45A0A087WSX0 123 aa10.75□□□□□ -0.69
LIM2-201ENST00000221973 APOMO95445 188 aa10.75□□□□□ -0.69
LIM2-201ENST00000221973 ZNF22P17026 224 aaPredicted RBP10.75□□□□□ -0.69
LIM2-201ENST00000221973 Q8N814 137 aa10.75□□□□□ -0.69
LIM2-201ENST00000221973 C14orf177Q52M58 125 aa10.74□□□□□ -0.69
LIM2-201ENST00000221973 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
LIM2-201ENST00000221973 ORAOV1Q8WV07 137 aa10.74□□□□□ -0.69
LIM2-201ENST00000221973 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.73□□□□□ -0.69
LIM2-201ENST00000221973 IGHV3-64A0A075B6Q5 118 aa10.73□□□□□ -0.69
LIM2-201ENST00000221973 hDV102S1A0JD36 115 aa10.73□□□□□ -0.69
LIM2-201ENST00000221973 H3BRM9 83 aa10.73□□□□□ -0.69
LIM2-201ENST00000221973 DPM2O94777 84 aa10.73□□□□□ -0.69
LIM2-201ENST00000221973 SPINK8P0C7L1 97 aa10.73□□□□□ -0.69
LIM2-201ENST00000221973 LINC01545Q5VT33 79 aa10.73□□□□□ -0.69
LIM2-201ENST00000221973 LINC01561Q8N1V8 128 aa10.73□□□□□ -0.69
LIM2-201ENST00000221973 PLNP26678 52 aa10.72□□□□□ -0.69
LIM2-201ENST00000221973 FUSP35637 526 aaKnown RBP eCLIP10.72□□□□□ -0.69
LIM2-201ENST00000221973 LINC00526Q96FQ7 95 aa10.72□□□□□ -0.69
LIM2-201ENST00000221973 GVQW2A0A096LPI5 108 aaPredicted RBP10.71□□□□□ -0.69
LIM2-201ENST00000221973 SMIM1B2RUZ4 78 aa10.71□□□□□ -0.69
LIM2-201ENST00000221973 IGKCP01834 107 aa10.71□□□□□ -0.69
LIM2-201ENST00000221973 SPAG11BQ08648 103 aa10.71□□□□□ -0.69
LIM2-201ENST00000221973 OR10D4PQ8NGN7 298 aa10.71□□□□□ -0.69
LIM2-201ENST00000221973 C20orf202A1L168 122 aa10.7□□□□□ -0.7
LIM2-201ENST00000221973 ZNF561-AS1K7EIQ3 104 aa10.7□□□□□ -0.7
LIM2-201ENST00000221973 TOMM7Q9P0U1 55 aa10.7□□□□□ -0.7
LIM2-201ENST00000221973 TMEM223A0PJW6 202 aa10.68□□□□□ -0.7
LIM2-201ENST00000221973 SLPIP03973 132 aa10.67□□□□□ -0.7
LIM2-201ENST00000221973 PRSS2P07478 247 aa10.67□□□□□ -0.7
LIM2-201ENST00000221973 XGP55808 180 aa10.67□□□□□ -0.7
LIM2-201ENST00000221973 VPS13BQ7Z7G8 4022 aa10.66□□□□□ -0.7
LIM2-201ENST00000221973 MYCBP2O75592 4640 aa10.66□□□□□ -0.7
LIM2-201ENST00000221973 IGLV5-52A0A0A0MRZ9 124 aa10.66□□□□□ -0.7
LIM2-201ENST00000221973 KIAA0087Q14695 138 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms