RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 TMEM241Q24JQ0 296 aa9.49□□□□□ -0.89
NME3-201ENST00000219302 FAM104BQ5XKR9 115 aa9.49□□□□□ -0.89
NME3-201ENST00000219302 UNQ6190/PRO20217Q6UXQ8 127 aa9.49□□□□□ -0.89
NME3-201ENST00000219302 ORAOV1Q8WV07 137 aa9.49□□□□□ -0.89
NME3-201ENST00000219302 C20orf78Q9BR46 151 aa9.49□□□□□ -0.89
NME3-201ENST00000219302 IGLV1-50A0A075B6I6 118 aa9.48□□□□□ -0.89
NME3-201ENST00000219302 NDUFA1O15239 70 aa9.48□□□□□ -0.89
NME3-201ENST00000219302 SRP19P09132 144 aaKnown RBP9.48□□□□□ -0.89
NME3-201ENST00000219302 RPL32P62910 135 aaKnown RBP9.48□□□□□ -0.89
NME3-201ENST00000219302 EIF5A2Q9GZV4 153 aaKnown RBP9.48□□□□□ -0.89
NME3-201ENST00000219302 C6orf48Q9UBA6 75 aa9.48□□□□□ -0.89
NME3-201ENST00000219302 LINC00862A6NCI5 91 aa9.47□□□□□ -0.89
NME3-201ENST00000219302 MRPS36P82909 103 aaKnown RBP9.46□□□□□ -0.9
NME3-201ENST00000219302 KIAA0087Q14695 138 aa9.46□□□□□ -0.9
NME3-201ENST00000219302 NAT8BQ9UHF3 227 aa9.46□□□□□ -0.9
NME3-201ENST00000219302 TCAPO15273 167 aa9.45□□□□□ -0.9
NME3-201ENST00000219302 FAM19A5Q7Z5A7 132 aaPredicted RBP9.45□□□□□ -0.9
NME3-201ENST00000219302 SMDT1Q9H4I9 107 aa9.45□□□□□ -0.9
NME3-201ENST00000219302 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
NME3-201ENST00000219302 TNFRSF6BO95407 300 aa9.44□□□□□ -0.9
NME3-201ENST00000219302 CKS2P33552 79 aa9.44□□□□□ -0.9
NME3-201ENST00000219302 GAGE2EQ4V326 116 aa9.44□□□□□ -0.9
NME3-201ENST00000219302 FAM74A3Q4VXF1 159 aa9.44□□□□□ -0.9
NME3-201ENST00000219302 GAGE2DQ9UEU5 116 aa9.44□□□□□ -0.9
NME3-201ENST00000219302 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
NME3-201ENST00000219302 RPL23P62829 140 aaKnown RBP9.43□□□□□ -0.9
NME3-201ENST00000219302 SMIM2Q9BVW6 85 aa9.43□□□□□ -0.9
NME3-201ENST00000219302 IFITM10A6NMD0 228 aa9.42□□□□□ -0.9
NME3-201ENST00000219302 HBBP68871 147 aa9.42□□□□□ -0.9
NME3-201ENST00000219302 M0QXV9 152 aa9.41□□□□□ -0.9
NME3-201ENST00000219302 A0A1B0GW15 77 aa9.4□□□□□ -0.9
NME3-201ENST00000219302 D6R8Y8 96 aa9.4□□□□□ -0.9
NME3-201ENST00000219302 NPYP01303 97 aa9.4□□□□□ -0.9
NME3-201ENST00000219302 PRR4Q16378 134 aa9.4□□□□□ -0.9
NME3-201ENST00000219302 C9orf129Q5T035 196 aaKnown RBP9.4□□□□□ -0.9
NME3-201ENST00000219302 LINC00242Q5T6M2 205 aa9.4□□□□□ -0.9
NME3-201ENST00000219302 TRBV30A0A0K0K1B3 111 aa9.39□□□□□ -0.91
NME3-201ENST00000219302 RPL13AP40429 203 aaKnown RBP9.39□□□□□ -0.91
NME3-201ENST00000219302 UBE2BP63146 152 aa9.39□□□□□ -0.91
NME3-201ENST00000219302 C2orf82Q6UX34 121 aa9.39□□□□□ -0.91
NME3-201ENST00000219302 CARHSP1Q9Y2V2 147 aaKnown RBP9.39□□□□□ -0.91
NME3-201ENST00000219302 TGIF2-C20orf24A0A0A6YYL0 155 aa9.38□□□□□ -0.91
NME3-201ENST00000219302 C9JQL5 133 aa9.38□□□□□ -0.91
NME3-201ENST00000219302 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
NME3-201ENST00000219302 UBE2D1P51668 147 aa9.38□□□□□ -0.91
NME3-201ENST00000219302 PYGO1Q9Y3Y4 419 aa9.38□□□□□ -0.91
NME3-201ENST00000219302 A0A1B0GXF2 115 aa9.37□□□□□ -0.91
NME3-201ENST00000219302 ADIRFQ15847 76 aa9.37□□□□□ -0.91
NME3-201ENST00000219302 IGLV4-3A0A075B6K6 122 aa9.36□□□□□ -0.91
NME3-201ENST00000219302 ZNF861PO60384 105 aa9.36□□□□□ -0.91
NME3-201ENST00000219302 AKAP14Q86UN6 197 aa9.36□□□□□ -0.91
NME3-201ENST00000219302 NAT8Q9UHE5 227 aa9.36□□□□□ -0.91
NME3-201ENST00000219302 F8W036 122 aa9.35□□□□□ -0.91
NME3-201ENST00000219302 PPBPP02775 128 aa9.35□□□□□ -0.91
NME3-201ENST00000219302 IFI27P40305 119 aaPredicted RBP9.35□□□□□ -0.91
NME3-201ENST00000219302 MRPL54Q6P161 138 aaKnown RBP9.35□□□□□ -0.91
NME3-201ENST00000219302 LINC01561Q8N1V8 128 aa9.35□□□□□ -0.91
NME3-201ENST00000219302 S100A8P05109 93 aa9.34□□□□□ -0.91
NME3-201ENST00000219302 PACRGQ96M98 296 aaPredicted RBP9.34□□□□□ -0.91
NME3-201ENST00000219302 PRSS47A8MTI9 375 aa9.33□□□□□ -0.92
NME3-201ENST00000219302 RAB5AP20339 215 aa9.33□□□□□ -0.92
NME3-201ENST00000219302 TMEM136Q6ZRR5 245 aa9.33□□□□□ -0.92
NME3-201ENST00000219302 TMEM141Q96I45 108 aa9.33□□□□□ -0.92
NME3-201ENST00000219302 SRSF3P84103 164 aaKnown RBP9.32□□□□□ -0.92
NME3-201ENST00000219302 ORMDL3Q8N138 153 aa9.32□□□□□ -0.92
NME3-201ENST00000219302 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
NME3-201ENST00000219302 ZC2HC1BQ5TFG8 222 aa9.31□□□□□ -0.92
NME3-201ENST00000219302 PRELID3AQ96N28 172 aa9.31□□□□□ -0.92
NME3-201ENST00000219302 KRTAP9-2Q9BYQ4 174 aa9.31□□□□□ -0.92
NME3-201ENST00000219302 FAT4Q6V0I7 4981 aa9.31□□□□□ -0.92
NME3-201ENST00000219302 NUPR1O60356 82 aa9.3□□□□□ -0.92
NME3-201ENST00000219302 TSPAN13O95857 204 aa9.3□□□□□ -0.92
NME3-201ENST00000219302 TEX43Q6ZNM6 134 aa9.3□□□□□ -0.92
NME3-201ENST00000219302 LINC00173Q6ZV60 143 aa9.3□□□□□ -0.92
NME3-201ENST00000219302 AMELXQ99217 191 aa9.3□□□□□ -0.92
NME3-201ENST00000219302 A0A087X002 238 aa9.29□□□□□ -0.92
NME3-201ENST00000219302 Q6ZN92 141 aa9.29□□□□□ -0.92
NME3-201ENST00000219302 LINC00469Q8N7U9 141 aa9.29□□□□□ -0.92
NME3-201ENST00000219302 CTDSP1Q9GZU7 261 aa9.29□□□□□ -0.92
NME3-201ENST00000219302 A0A0U1RQV1 116 aa9.28□□□□□ -0.92
NME3-201ENST00000219302 LBHQ53QV2 105 aaPredicted RBP9.28□□□□□ -0.92
NME3-201ENST00000219302 XAGE1AQ9HD64 81 aa9.28□□□□□ -0.92
NME3-201ENST00000219302 hCG_2014768A0A024R1R8 64 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 PRSS2P07478 247 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 CKS1BP61024 79 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 PEA15Q15121 130 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 C6orf226Q5I0X4 101 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 LCE2AQ5TA79 106 aaPredicted RBP9.27□□□□□ -0.93
NME3-201ENST00000219302 C2orf66Q6UXQ4 117 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 ATP5L2Q7Z4Y8 100 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 FAM19A3Q7Z5A8 133 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 Q8IZM0 81 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 C2orf88Q9BSF0 95 aa9.27□□□□□ -0.93
NME3-201ENST00000219302 LOC389332A0A1B0GUA5 103 aa9.26□□□□□ -0.93
NME3-201ENST00000219302 IGIPA6NJ69 53 aa9.26□□□□□ -0.93
NME3-201ENST00000219302 VCX2Q9H322 139 aa9.26□□□□□ -0.93
NME3-201ENST00000219302 TOMM7Q9P0U1 55 aa9.26□□□□□ -0.93
NME3-201ENST00000219302 TP73-AS1Q9UF72 201 aa9.26□□□□□ -0.93
NME3-201ENST00000219302 Q8N8P6 123 aa9.25□□□□□ -0.93
NME3-201ENST00000219302 ALKBH7Q9BT30 221 aaPredicted RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms