RNA–Protein interactions for RNA: ENST00000216456.6

VTI1B-201, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 1 (best)

Gene VTI1B, Length 1,103 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-201ENST00000216456 C10orf25Q5T742 122 aa13.66□□□□□ -0.22
VTI1B-201ENST00000216456 Q6ZRP5 223 aa13.66□□□□□ -0.22
VTI1B-201ENST00000216456 C2orf48Q96LS8 159 aa13.66□□□□□ -0.22
VTI1B-201ENST00000216456 PKIGQ9Y2B9 76 aa13.66□□□□□ -0.22
VTI1B-201ENST00000216456 SPINK6Q6UWN8 80 aa13.65□□□□□ -0.22
VTI1B-201ENST00000216456 PHF5AQ7RTV0 110 aaKnown RBP13.65□□□□□ -0.22
VTI1B-201ENST00000216456 ORAOV1Q8WV07 137 aa13.65□□□□□ -0.22
VTI1B-201ENST00000216456 IGHV3OR16-9A0A0B4J2B5 98 aa13.64□□□□□ -0.23
VTI1B-201ENST00000216456 F8W036 122 aa13.64□□□□□ -0.23
VTI1B-201ENST00000216456 SMDT1Q9H4I9 107 aa13.64□□□□□ -0.23
VTI1B-201ENST00000216456 SPANXA1Q9NS26 97 aa13.64□□□□□ -0.23
VTI1B-201ENST00000216456 IFITM10A6NMD0 228 aa13.63□□□□□ -0.23
VTI1B-201ENST00000216456 KRTAP10-8P60410 259 aa13.62□□□□□ -0.23
VTI1B-201ENST00000216456 TMEM136Q6ZRR5 245 aa13.62□□□□□ -0.23
VTI1B-201ENST00000216456 FAM168BA1KXE4 195 aa13.61□□□□□ -0.23
VTI1B-201ENST00000216456 S100A8P05109 93 aa13.61□□□□□ -0.23
VTI1B-201ENST00000216456 MRPS36P82909 103 aaKnown RBP13.61□□□□□ -0.23
VTI1B-201ENST00000216456 ZC2HC1BQ5TFG8 222 aa13.61□□□□□ -0.23
VTI1B-201ENST00000216456 UNQ6190/PRO20217Q6UXQ8 127 aa13.61□□□□□ -0.23
VTI1B-201ENST00000216456 ORMDL3Q8N138 153 aa13.61□□□□□ -0.23
VTI1B-201ENST00000216456 PRELID3AQ96N28 172 aa13.61□□□□□ -0.23
VTI1B-201ENST00000216456 PSORS1C2Q9UIG4 136 aa13.61□□□□□ -0.23
VTI1B-201ENST00000216456 LOC389332A0A1B0GUA5 103 aa13.6□□□□□ -0.23
VTI1B-201ENST00000216456 KRTAP11-1Q8IUC1 163 aa13.6□□□□□ -0.23
VTI1B-201ENST00000216456 OR10D4PQ8NGN7 298 aa13.6□□□□□ -0.23
VTI1B-201ENST00000216456 PPBPP02775 128 aa13.59□□□□□ -0.23
VTI1B-201ENST00000216456 IGLV4-3A0A075B6K6 122 aa13.58□□□□□ -0.24
VTI1B-201ENST00000216456 MRPL35Q9NZE8 188 aaKnown RBP13.58□□□□□ -0.24
VTI1B-201ENST00000216456 C6orf48Q9UBA6 75 aa13.58□□□□□ -0.24
VTI1B-201ENST00000216456 REG3GQ6UW15 175 aa13.57□□□□□ -0.24
VTI1B-201ENST00000216456 RAB5AP20339 215 aa13.56□□□□□ -0.24
VTI1B-201ENST00000216456 RNF151Q2KHN1 245 aa13.56□□□□□ -0.24
VTI1B-201ENST00000216456 LINC00242Q5T6M2 205 aa13.56□□□□□ -0.24
VTI1B-201ENST00000216456 ATP5L2Q7Z4Y8 100 aa13.56□□□□□ -0.24
VTI1B-201ENST00000216456 NDUFA1O15239 70 aa13.55□□□□□ -0.24
VTI1B-201ENST00000216456 MT-ND6P03923 174 aa13.55□□□□□ -0.24
VTI1B-201ENST00000216456 IFI27P40305 119 aaPredicted RBP13.55□□□□□ -0.24
VTI1B-201ENST00000216456 KIAA0087Q14695 138 aa13.55□□□□□ -0.24
VTI1B-201ENST00000216456 C1orf137Q5JT78 98 aa13.55□□□□□ -0.24
VTI1B-201ENST00000216456 GAGE2EQ4V326 116 aa13.54□□□□□ -0.24
VTI1B-201ENST00000216456 C2orf82Q6UX34 121 aa13.54□□□□□ -0.24
VTI1B-201ENST00000216456 KRTAP7-1Q8IUC3 87 aa13.54□□□□□ -0.24
VTI1B-201ENST00000216456 GAGE2DQ9UEU5 116 aa13.54□□□□□ -0.24
VTI1B-201ENST00000216456 FAM19A5Q7Z5A7 132 aaPredicted RBP13.53□□□□□ -0.24
VTI1B-201ENST00000216456 A0A087WZ39 114 aa13.52□□□□□ -0.25
VTI1B-201ENST00000216456 TGIF2-C20orf24A0A0A6YYL0 155 aa13.52□□□□□ -0.25
VTI1B-201ENST00000216456 PYGO1Q9Y3Y4 419 aa13.52□□□□□ -0.25
VTI1B-201ENST00000216456 LINC00173Q6ZV60 143 aa13.51□□□□□ -0.25
VTI1B-201ENST00000216456 TMEM141Q96I45 108 aa13.51□□□□□ -0.25
VTI1B-201ENST00000216456 RNF213Q63HN8 5207 aa13.5□□□□□ -0.25
VTI1B-201ENST00000216456 PRSS47A8MTI9 375 aa13.5□□□□□ -0.25
VTI1B-201ENST00000216456 IMMP2LQ96T52 175 aa13.5□□□□□ -0.25
VTI1B-201ENST00000216456 MAP1LC3AQ9H492 121 aa13.5□□□□□ -0.25
VTI1B-201ENST00000216456 UBE2D1P51668 147 aa13.49□□□□□ -0.25
VTI1B-201ENST00000216456 C2orf66Q6UXQ4 117 aa13.49□□□□□ -0.25
VTI1B-201ENST00000216456 TLX1NBP0CAT3 122 aa13.48□□□□□ -0.25
VTI1B-201ENST00000216456 Q8N8P6 123 aa13.48□□□□□ -0.25
VTI1B-201ENST00000216456 F8WDY8 70 aa13.47□□□□□ -0.25
VTI1B-201ENST00000216456 TEX43Q6ZNM6 134 aa13.47□□□□□ -0.25
VTI1B-201ENST00000216456 MT-ND4LP03901 98 aa13.46□□□□□ -0.25
VTI1B-201ENST00000216456 ANAPC16Q96DE5 110 aa13.46□□□□□ -0.25
VTI1B-201ENST00000216456 CYSLTR1Q9Y271 337 aa13.46□□□□□ -0.25
VTI1B-201ENST00000216456 IGLV7-43P04211 117 aa13.45□□□□□ -0.26
VTI1B-201ENST00000216456 PNRC1Q12796 327 aaPredicted RBP13.45□□□□□ -0.26
VTI1B-201ENST00000216456 C9orf129Q5T035 196 aaKnown RBP13.45□□□□□ -0.26
VTI1B-201ENST00000216456 AMELXQ99217 191 aa13.45□□□□□ -0.26
VTI1B-201ENST00000216456 LAMTOR2Q9Y2Q5 125 aa13.45□□□□□ -0.26
VTI1B-201ENST00000216456 IGIPA6NJ69 53 aa13.43□□□□□ -0.26
VTI1B-201ENST00000216456 KIAA1644Q3SXP7 199 aa13.43□□□□□ -0.26
VTI1B-201ENST00000216456 PRR26Q8N8Z3 221 aa13.43□□□□□ -0.26
VTI1B-201ENST00000216456 VCX2Q9H322 139 aa13.42□□□□□ -0.26
VTI1B-201ENST00000216456 TOMM7Q9P0U1 55 aa13.42□□□□□ -0.26
VTI1B-201ENST00000216456 M0QXV9 152 aa13.41□□□□□ -0.26
VTI1B-201ENST00000216456 ADCYAP1P18509 176 aa13.41□□□□□ -0.26
VTI1B-201ENST00000216456 C2orf88Q9BSF0 95 aa13.41□□□□□ -0.26
VTI1B-201ENST00000216456 TRBV30A0A0K0K1B3 111 aa13.4□□□□□ -0.26
VTI1B-201ENST00000216456 RAB14P61106 215 aa13.4□□□□□ -0.26
VTI1B-201ENST00000216456 Q6ZN92 141 aa13.4□□□□□ -0.26
VTI1B-201ENST00000216456 LINC00469Q8N7U9 141 aa13.4□□□□□ -0.26
VTI1B-201ENST00000216456 NDUFC2-KCTD14E9PQ53 114 aa13.39□□□□□ -0.27
VTI1B-201ENST00000216456 ORMDL2Q53FV1 153 aa13.39□□□□□ -0.27
VTI1B-201ENST00000216456 PACRGQ96M98 296 aaPredicted RBP13.39□□□□□ -0.27
VTI1B-201ENST00000216456 CTDSP1Q9GZU7 261 aa13.39□□□□□ -0.27
VTI1B-201ENST00000216456 LPAP08519 4548 aa13.39□□□□□ -0.27
VTI1B-201ENST00000216456 UBE2BP63146 152 aa13.37□□□□□ -0.27
VTI1B-201ENST00000216456 DIRC1Q969H9 104 aa13.37□□□□□ -0.27
VTI1B-201ENST00000216456 CDKN2A-AS1Q9UH64 79 aa13.37□□□□□ -0.27
VTI1B-201ENST00000216456 H0Y9J4 135 aa13.36□□□□□ -0.27
VTI1B-201ENST00000216456 LINC01561Q8N1V8 128 aa13.36□□□□□ -0.27
VTI1B-201ENST00000216456 CLLU1Q5K131 121 aa13.35□□□□□ -0.27
VTI1B-201ENST00000216456 FAM19A3Q7Z5A8 133 aa13.35□□□□□ -0.27
VTI1B-201ENST00000216456 XAGE1AQ9HD64 81 aa13.35□□□□□ -0.27
VTI1B-201ENST00000216456 NXT2Q9NPJ8 142 aaKnown RBP13.35□□□□□ -0.27
VTI1B-201ENST00000216456 PRSS2P07478 247 aa13.34□□□□□ -0.27
VTI1B-201ENST00000216456 KRTAP1-4P0C5Y4 121 aa13.34□□□□□ -0.27
VTI1B-201ENST00000216456 C6orf226Q5I0X4 101 aa13.34□□□□□ -0.27
VTI1B-201ENST00000216456 ALKBH7Q9BT30 221 aaPredicted RBP13.34□□□□□ -0.27
VTI1B-201ENST00000216456 CKS1BP61024 79 aa13.33□□□□□ -0.28
VTI1B-201ENST00000216456 TOMM6Q96B49 74 aa13.33□□□□□ -0.28
VTI1B-201ENST00000216456 Q8IZM0 81 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms