RNA–Protein interactions for RNA: ENST00000640916.1

SCARB2-226, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 689 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-226ENST00000640916 A0A087X002 238 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 TMSB15BA0A087X1C1 80 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 IGKV3OR2-268A0A0C4DH90 116 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 LOC107984640A0A0U1RRK4 108 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 ARL14EPLP0DKL9 152 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 BCL2P10415 239 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 RPL12P30050 165 aaKnown RBP4.7□□□□□ -1.66
SCARB2-226ENST00000640916 SYCNQ0VAF6 134 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 OR10AG1Q8NH19 301 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 MARVELD1Q9BSK0 173 aa4.7□□□□□ -1.66
SCARB2-226ENST00000640916 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.69□□□□□ -1.66
SCARB2-226ENST00000640916 M0QY20 66 aa4.69□□□□□ -1.66
SCARB2-226ENST00000640916 CRYGAP11844 174 aa4.69□□□□□ -1.66
SCARB2-226ENST00000640916 MT1HP80294 61 aa4.69□□□□□ -1.66
SCARB2-226ENST00000640916 MEF2BQ02080 365 aaPredicted RBP4.69□□□□□ -1.66
SCARB2-226ENST00000640916 VAMP3Q15836 100 aa4.69□□□□□ -1.66
SCARB2-226ENST00000640916 Q86TA4 180 aa4.69□□□□□ -1.66
SCARB2-226ENST00000640916 KRTAP7-1Q8IUC3 87 aa4.69□□□□□ -1.66
SCARB2-226ENST00000640916 PPP1R1CQ8WVI7 109 aa4.69□□□□□ -1.66
SCARB2-226ENST00000640916 IGLV7-46A0A075B6I9 117 aa4.68□□□□□ -1.66
SCARB2-226ENST00000640916 A0A087WZ39 114 aa4.68□□□□□ -1.66
SCARB2-226ENST00000640916 RAB19A4D1S5 217 aa4.68□□□□□ -1.66
SCARB2-226ENST00000640916 EIF5AP63241 154 aaKnown RBP4.68□□□□□ -1.66
SCARB2-226ENST00000640916 ASB16-AS1Q495Z4 193 aa4.68□□□□□ -1.66
SCARB2-226ENST00000640916 NUP35Q8NFH5 326 aa4.68□□□□□ -1.66
SCARB2-226ENST00000640916 IGHV1-58A0A0C4DH39 117 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 MUC21A0A140T8X8 626 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 FAM168BA1KXE4 195 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 MPC2O95563 127 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 FGF6P10767 208 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 GCHFRP30047 84 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 UBE2G2P60604 165 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 FAM162BQ5T6X4 162 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 UQCC3Q6UW78 93 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 PGLYRP4Q96LB8 373 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 MED28Q9H204 178 aa4.67□□□□□ -1.66
SCARB2-226ENST00000640916 IGLV4-69A0A075B6H9 119 aa4.66□□□□□ -1.66
SCARB2-226ENST00000640916 SMLR1H3BR10 107 aa4.66□□□□□ -1.66
SCARB2-226ENST00000640916 SNAI2O43623 268 aa4.66□□□□□ -1.66
SCARB2-226ENST00000640916 NPSP0C0P6 89 aa4.66□□□□□ -1.66
SCARB2-226ENST00000640916 CDC34P49427 236 aaPredicted RBP4.66□□□□□ -1.66
SCARB2-226ENST00000640916 KRTAP10-6P60371 365 aaPredicted RBP4.66□□□□□ -1.66
SCARB2-226ENST00000640916 Q5BKY6 102 aa4.66□□□□□ -1.66
SCARB2-226ENST00000640916 WFDC1Q9HC57 220 aa4.66□□□□□ -1.66
SCARB2-226ENST00000640916 HSPB11Q9Y547 144 aa4.66□□□□□ -1.66
SCARB2-226ENST00000640916 APOMO95445 188 aa4.65□□□□□ -1.67
SCARB2-226ENST00000640916 XCL1P47992 114 aa4.65□□□□□ -1.67
SCARB2-226ENST00000640916 NKX2-5P52952 324 aaPredicted RBP4.65□□□□□ -1.67
SCARB2-226ENST00000640916 SUMO4Q6EEV6 95 aa4.65□□□□□ -1.67
SCARB2-226ENST00000640916 FXYD6-FXYD2A0A087WZ82 144 aa4.64□□□□□ -1.67
SCARB2-226ENST00000640916 PEX7O00628 323 aa4.64□□□□□ -1.67
SCARB2-226ENST00000640916 UBE2L6O14933 153 aa4.64□□□□□ -1.67
SCARB2-226ENST00000640916 CCL25O15444 150 aa4.64□□□□□ -1.67
SCARB2-226ENST00000640916 OR5AL1P0C617 328 aa4.64□□□□□ -1.67
SCARB2-226ENST00000640916 Q75L30 129 aa4.64□□□□□ -1.67
SCARB2-226ENST00000640916 SCGB1C1Q8TD33 95 aa4.64□□□□□ -1.67
SCARB2-226ENST00000640916 TMEM18Q96B42 140 aa4.64□□□□□ -1.67
SCARB2-226ENST00000640916 ZFP30Q9Y2G7 519 aa4.64□□□□□ -1.67
SCARB2-226ENST00000640916 LINC00959A0A1B0GUT2 108 aa4.63□□□□□ -1.67
SCARB2-226ENST00000640916 A0A1W2PRE2 83 aa4.63□□□□□ -1.67
SCARB2-226ENST00000640916 CXCL1P09341 107 aa4.63□□□□□ -1.67
SCARB2-226ENST00000640916 PET100P0DJ07 73 aa4.63□□□□□ -1.67
SCARB2-226ENST00000640916 RPL18AQ02543 176 aaKnown RBP4.63□□□□□ -1.67
SCARB2-226ENST00000640916 KRTAP13-2Q52LG2 175 aa4.63□□□□□ -1.67
SCARB2-226ENST00000640916 OR5A1Q8NGJ0 315 aa4.63□□□□□ -1.67
SCARB2-226ENST00000640916 TYMSOSQ8TAI1 123 aa4.63□□□□□ -1.67
SCARB2-226ENST00000640916 OPRPNQ99935 248 aaPredicted RBP4.63□□□□□ -1.67
SCARB2-226ENST00000640916 PPDPFQ9H3Y8 114 aa4.63□□□□□ -1.67
SCARB2-226ENST00000640916 ZNF861PO60384 105 aa4.62□□□□□ -1.67
SCARB2-226ENST00000640916 LTAP01374 205 aa4.62□□□□□ -1.67
SCARB2-226ENST00000640916 CFC1BP0CG36 223 aa4.62□□□□□ -1.67
SCARB2-226ENST00000640916 SPANXN1Q5VSR9 72 aa4.62□□□□□ -1.67
SCARB2-226ENST00000640916 LINC00173Q6ZV60 143 aa4.62□□□□□ -1.67
SCARB2-226ENST00000640916 TMEM167BQ9NRX6 74 aa4.62□□□□□ -1.67
SCARB2-226ENST00000640916 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.61□□□□□ -1.67
SCARB2-226ENST00000640916 A0A1B0GW15 77 aa4.61□□□□□ -1.67
SCARB2-226ENST00000640916 IGKV2-29A2NJV5 120 aaPredicted RBP4.61□□□□□ -1.67
SCARB2-226ENST00000640916 RASL11AQ6T310 242 aa4.61□□□□□ -1.67
SCARB2-226ENST00000640916 ISOC2Q96AB3 205 aa4.61□□□□□ -1.67
SCARB2-226ENST00000640916 G3V3Q6 166 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 ARPC5O15511 151 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 BCL2L11O43521 198 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 CXorf1O96002 111 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 MGPP08493 103 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 GIPP09681 153 aaPredicted RBP4.6□□□□□ -1.67
SCARB2-226ENST00000640916 SMIM17P0DL12 118 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 NTF3P20783 257 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 ATP6V0CP27449 155 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 KRTAP13-3Q3SY46 172 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 C5orf47Q569G3 176 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 RPL7L1Q6DKI1 246 aaKnown RBP4.6□□□□□ -1.67
SCARB2-226ENST00000640916 FAM19A5Q7Z5A7 132 aaPredicted RBP4.6□□□□□ -1.67
SCARB2-226ENST00000640916 TSKUQ8WUA8 353 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 HIST1H2BAQ96A08 127 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 AP1S3Q96PC3 154 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 CAMK2N2Q96S95 79 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 NIT2Q9NQR4 276 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 ANAPC11Q9NYG5 84 aa4.6□□□□□ -1.67
SCARB2-226ENST00000640916 FAM74A7A6NL05 159 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms