RNA–Protein interactions for RNA: ENST00000640072.1

NECAP1-222, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,456 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-222ENST00000640072 KRTAP16-1A8MUX0 517 aa4.36□□□□□ -1.71
NECAP1-222ENST00000640072 Q8N3U1 123 aa4.36□□□□□ -1.71
NECAP1-222ENST00000640072 C1orf229Q6ZS94 237 aaPredicted RBP4.35□□□□□ -1.71
NECAP1-222ENST00000640072 ATP6V0E1O15342 81 aa4.35□□□□□ -1.71
NECAP1-222ENST00000640072 SLPIP03973 132 aa4.35□□□□□ -1.71
NECAP1-222ENST00000640072 FAM74A4Q5TZK3 123 aa4.35□□□□□ -1.71
NECAP1-222ENST00000640072 LITAFQ99732 161 aa4.35□□□□□ -1.71
NECAP1-222ENST00000640072 IGHV1-69P01742 117 aa4.34□□□□□ -1.71
NECAP1-222ENST00000640072 DEFB108BQ8NET1 73 aa4.34□□□□□ -1.71
NECAP1-222ENST00000640072 CENPFP49454 3210 aa4.34□□□□□ -1.71
NECAP1-222ENST00000640072 S4R3C0 116 aa4.34□□□□□ -1.71
NECAP1-222ENST00000640072 hDV103S1A0JD37 113 aa4.34□□□□□ -1.72
NECAP1-222ENST00000640072 K7EQG2 157 aa4.34□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV3-72A0A0B4J1Y9 119 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 IGKV1-17P01599 117 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 C9orf129Q5T035 196 aaKnown RBP4.33□□□□□ -1.72
NECAP1-222ENST00000640072 GNLYP22749 145 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 ZNRD1Q9P1U0 126 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 C11orf21Q9P2W6 132 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV7-4-1A0A0J9YVY3 117 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 C1orf134Q5TEV5 83 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 Q5VV11 94 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 CYP4F30PQ9H0H9 118 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 LINC00574Q9H8X3 128 aa4.33□□□□□ -1.72
NECAP1-222ENST00000640072 RP1L1Q8IWN7 2480 aaPredicted RBP4.32□□□□□ -1.72
NECAP1-222ENST00000640072 A0A087WYN8 130 aa4.32□□□□□ -1.72
NECAP1-222ENST00000640072 CASC2Q6XLA1 102 aa4.32□□□□□ -1.72
NECAP1-222ENST00000640072 BBC3Q96PG8 261 aaPredicted RBP4.32□□□□□ -1.72
NECAP1-222ENST00000640072 TRBV10-1A0A0K0K1A3 114 aa4.32□□□□□ -1.72
NECAP1-222ENST00000640072 BPY2O14599 106 aa4.32□□□□□ -1.72
NECAP1-222ENST00000640072 CCL3P10147 92 aa4.32□□□□□ -1.72
NECAP1-222ENST00000640072 PRR15LQ9BU68 103 aa4.32□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV4-4A0A075B6R2 117 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV3OR16-8A0A075B7F1 116 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 C10orf142B7Z368 130 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV1-2P23083 117 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 LIMD2Q9BT23 127 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 C22orf24Q9Y442 160 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 LRP4O75096 1905 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 PRAC2D3DTV9 90 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 CMC4P56277 68 aaPredicted RBP4.31□□□□□ -1.72
NECAP1-222ENST00000640072 LINC01547P58512 204 aaPredicted RBP4.31□□□□□ -1.72
NECAP1-222ENST00000640072 ADM2Q7Z4H4 148 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 CDC42SE1Q9NRR8 79 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 UTRNP46939 3433 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV3-35A0A0C4DH35 117 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 PRR4Q16378 134 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 C22orf34Q6ZV56 151 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 LINC00476Q8WZB0 136 aa4.31□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV1-8P0DP01 117 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 C17orf58Q2M2W7 97 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 IGLV4-3A0A075B6K6 122 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 TRBV7-4A0A0J9YYF1 115 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 POLR2KP53803 58 aaKnown RBP4.3□□□□□ -1.72
NECAP1-222ENST00000640072 Q8N814 137 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 C1orf64Q8NEQ6 169 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 MED13LQ71F56 2210 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 SUMO4Q6EEV6 95 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 C20orf203Q8NBC4 194 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 ASXL3Q9C0F0 2248 aa4.3□□□□□ -1.72
NECAP1-222ENST00000640072 SPTBN1Q01082 2364 aaKnown RBP4.29□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV3OR16-12A0A075B7B8 117 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 LINC00242Q5T6M2 205 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 ZNF833PQ6ZTB9 187 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 Q6ZTI0 123 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 HIGD2AQ9BW72 106 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 SMAD5-AS1Q9Y6J3 95 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV3-74A0A0B4J1X5 117 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV1-18A0A0C4DH31 117 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 NDUFA1O15239 70 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 FSHBP01225 129 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 MOBPQ13875 183 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 CNEP1R1Q8N9A8 125 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 ERC2-IT1O76042 136 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 SMIM11BQ8TCY0 68 aa4.29□□□□□ -1.72
NECAP1-222ENST00000640072 RAI1Q7Z5J4 1906 aaPredicted RBP4.28□□□□□ -1.72
NECAP1-222ENST00000640072 TRBV6-8A0A0A6YYG3 113 aa4.28□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV3-66A0A0C4DH42 116 aa4.28□□□□□ -1.72
NECAP1-222ENST00000640072 COX7A1P24310 79 aa4.28□□□□□ -1.72
NECAP1-222ENST00000640072 C11orf71Q6IPW1 123 aa4.28□□□□□ -1.72
NECAP1-222ENST00000640072 Q6ZTC4 211 aa4.28□□□□□ -1.72
NECAP1-222ENST00000640072 PKDREJQ9NTG1 2253 aa4.28□□□□□ -1.72
NECAP1-222ENST00000640072 LINC00158P58513 81 aa4.28□□□□□ -1.72
NECAP1-222ENST00000640072 KIF25-AS1Q9Y6Z4 181 aa4.28□□□□□ -1.72
NECAP1-222ENST00000640072 APC2O95996 2303 aa4.28□□□□□ -1.72
NECAP1-222ENST00000640072 IGHV4OR15-8A0A075B7B6 117 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 A0A087WW49 117 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 IGHV3-16A0A0C4DH30 117 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 CHTF8P0CG12 524 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 NOTCH2NLQ7Z3S9 236 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 OBSCN-AS1Q96MR7 158 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 NCOR1O75376 2440 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 I3L2K1 104 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 IGHV3-23P01764 117 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 SRRM5B3KS81 715 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 FAM229AH3BQW9 127 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 HIGD2BQ4VC39 106 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 CDKN2A-AS1Q9UH64 79 aa4.27□□□□□ -1.73
NECAP1-222ENST00000640072 DNAH12Q6ZR08 3092 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms