RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 JPT2Q9H910 190 aa3.91□□□□□ -1.78
PRKCH-228ENST00000640011 ARL2-SNX15V9GYD0 113 aa3.91□□□□□ -1.78
PRKCH-228ENST00000640011 TRBV25-1A0A075B6N4 114 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 MUC21A0A0G2JKD1 596 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 MUC21A0A140T8X8 626 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 FAM231BA6NCW3 169 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 COLCA2A8K830 154 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 H3BVH4 76 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 ARMS2P0C7Q2 107 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 CRIP1P50238 77 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 SSTP61278 116 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 UBE2G1P62253 170 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 Q6ZRP5 223 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 LINC00269Q8N2A0 174 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 HIST1H2BAQ96A08 127 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 YPEL4Q96NS1 127 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 SMCO4Q9NRQ5 59 aa3.9□□□□□ -1.79
PRKCH-228ENST00000640011 IGLV10-54A0A075B6I4 117 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 M0R381 172 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 LTAP01374 205 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 RPS10P46783 165 aaKnown RBP3.89□□□□□ -1.79
PRKCH-228ENST00000640011 RBX1P62877 108 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 REG3AQ06141 175 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 RHEBQ15382 184 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 MAJINQ3KP22 176 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 KRTAP26-1Q6PEX3 210 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 ZNF664Q8N3J9 261 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 STPG4Q8N801 248 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 V9GYV3 84 aa3.89□□□□□ -1.79
PRKCH-228ENST00000640011 A0A1B0GUV1 79 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 GRIFINA4D1Z8 144 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 GATCO43716 136 aaKnown RBP3.88□□□□□ -1.79
PRKCH-228ENST00000640011 SH2D1AO60880 128 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 MT-ND4LP03901 98 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 CHTF8P0CG12 524 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 COX6A2Q02221 97 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 ZNF56Q15929 161 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 IQCJQ1A5X6 159 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 FAM162BQ5T6X4 162 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 CLPSL2Q6UWE3 100 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 NRACQ8N912 160 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 NEXN-AS1Q8NBZ9 246 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 TMEM18Q96B42 140 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 FMC1Q96HJ9 113 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 URB1-AS1Q96HZ7 61 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 PSORS1C2Q9UIG4 136 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 ZFP30Q9Y2G7 519 aa3.88□□□□□ -1.79
PRKCH-228ENST00000640011 LPAP08519 4548 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 TRAV26-2A0A0B4J265 109 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 IGHV1-24A0A0C4DH33 117 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 TRBV6-1A0A0K0K1D8 114 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 C19orf71A6NCJ1 209 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 H7C1H1 209 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 SCGB1D1O95968 90 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 RAB5AP20339 215 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 PNRC1Q12796 327 aaPredicted RBP3.87□□□□□ -1.79
PRKCH-228ENST00000640011 SRSF9Q13242 221 aaKnown RBP eCLIP3.87□□□□□ -1.79
PRKCH-228ENST00000640011 MRPL54Q6P161 138 aaKnown RBP3.87□□□□□ -1.79
PRKCH-228ENST00000640011 COX8CQ7Z4L0 72 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 OR2D3Q8NGH3 330 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 PGLYRP4Q96LB8 373 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 IMMP2LQ96T52 175 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 KRTAP4-2Q9BYR5 136 aa3.87□□□□□ -1.79
PRKCH-228ENST00000640011 IGKV2-24A0A0C4DH68 120 aa3.86□□□□□ -1.79
PRKCH-228ENST00000640011 IGLV5-39A0A0G2JS06 123 aa3.86□□□□□ -1.79
PRKCH-228ENST00000640011 SMIM17P0DL12 118 aa3.86□□□□□ -1.79
PRKCH-228ENST00000640011 FOXA3P55318 350 aaPredicted RBP3.86□□□□□ -1.79
PRKCH-228ENST00000640011 GAGE6Q13070 117 aa3.86□□□□□ -1.79
PRKCH-228ENST00000640011 NTM-AS1Q6ZSK4 140 aa3.86□□□□□ -1.79
PRKCH-228ENST00000640011 MPLKIPQ8TAP9 179 aa3.86□□□□□ -1.79
PRKCH-228ENST00000640011 TPPP3Q9BW30 176 aa3.86□□□□□ -1.79
PRKCH-228ENST00000640011 RPP21Q9H633 154 aaKnown RBP3.86□□□□□ -1.79
PRKCH-228ENST00000640011 OSTCQ9NRP0 149 aa3.86□□□□□ -1.79
PRKCH-228ENST00000640011 S100A9P06702 114 aaKnown RBP3.85□□□□□ -1.79
PRKCH-228ENST00000640011 KIAA1644Q3SXP7 199 aa3.85□□□□□ -1.79
PRKCH-228ENST00000640011 C20orf203Q8NBC4 194 aa3.85□□□□□ -1.79
PRKCH-228ENST00000640011 TCEAL7Q9BRU2 100 aa3.85□□□□□ -1.79
PRKCH-228ENST00000640011 SMIM27A0A1W2PRY6 76 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 UBE2L6O14933 153 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 PPP1R2P9O14990 202 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 TRGC2P03986 189 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 S100PP25815 95 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 CAMPP49913 170 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 CACNG7P62955 275 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 FABP9Q0Z7S8 132 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 SPANXN1Q5VSR9 72 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 FAM231DQ6ZW35 169 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 C15orf56Q8N910 161 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 NUP35Q8NFH5 326 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 TMEM243Q9BU79 118 aa3.84□□□□□ -1.79
PRKCH-228ENST00000640011 GVQW2A0A096LPI5 108 aaPredicted RBP3.83□□□□□ -1.8
PRKCH-228ENST00000640011 HIGD1CA8MV81 97 aa3.83□□□□□ -1.8
PRKCH-228ENST00000640011 F2Z2F3 143 aa3.83□□□□□ -1.8
PRKCH-228ENST00000640011 SNAI2O43623 268 aa3.83□□□□□ -1.8
PRKCH-228ENST00000640011 OR5AL1P0C617 328 aa3.83□□□□□ -1.8
PRKCH-228ENST00000640011 LYZL1Q6UWQ5 148 aa3.83□□□□□ -1.8
PRKCH-228ENST00000640011 TMEM136Q6ZRR5 245 aa3.83□□□□□ -1.8
PRKCH-228ENST00000640011 TSKUQ8WUA8 353 aa3.83□□□□□ -1.8
PRKCH-228ENST00000640011 AP1S3Q96PC3 154 aa3.83□□□□□ -1.8
PRKCH-228ENST00000640011 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms