RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 A0A087WWC5 75 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 HLA-DQB1P01920 261 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 OR5AC1P0C628 307 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 BCL2P10415 239 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 SMIM11AP58511 58 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 Q6ZTI0 123 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 KTN1-AS1Q86SY8 53 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 AMN1Q8IY45 258 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 PYGO2Q9BRQ0 406 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 OR2D2Q9H210 308 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 U3KQ87 197 aa1.88□□□□□ -2.11
CCDC7-213ENST00000639290 UBE2L6O14933 153 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HRASP01112 189 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIST1H2BOP23527 126 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIST1H2BBP33778 126 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIST1H2BDP58876 126 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIST1H2BCP62807 126 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 CCL20P78556 96 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIST2H2BEQ16778 126 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 PIGYQ3MUY2 71 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.87□□□□□ -2.11
CCDC7-213ENST00000639290 TMEM244Q5VVB8 128 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 SPAG11AQ6PDA7 123 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 OR8I2Q8N0Y5 310 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 LINC00304Q8N9R0 145 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIST1H2BHQ93079 126 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIST1H2BNQ99877 126 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIST1H2BMQ99879 126 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 GGACTQ9BVM4 153 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 RBM7Q9Y580 266 aaKnown RBP1.87□□□□□ -2.11
CCDC7-213ENST00000639290 TRAV30A0A087WSZ9 112 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 C9JAW5 83 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 I3L2K1 104 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 PRM2P04554 102 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 KRTAP10-10P60014 251 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 RPL22L1Q6P5R6 122 aaKnown RBP1.87□□□□□ -2.11
CCDC7-213ENST00000639290 SLC25A34Q6PIV7 304 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 C12orf57Q99622 126 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 CMC2Q9NRP2 79 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 HIGD1AQ9Y241 93 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 PHLDA3Q9Y5J5 127 aa1.87□□□□□ -2.11
CCDC7-213ENST00000639290 TRDV1A0A1B0GX56 115 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 FAM25AB3EWG3 89 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 FAM25CB3EWG5 89 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 FAM25GB3EWG6 89 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 CDS2O95674 445 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 LINC00869P0C866 280 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 GZMBP10144 247 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 S100A11P31949 105 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 RRAS2P62070 204 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-213ENST00000639290 SELENOWP63302 87 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 SPINK13Q1W4C9 94 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 HRCT1Q6UXD1 115 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 LCA10Q71F78 164 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 TCTE3Q8IZS6 198 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 DAND5Q8N907 189 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 LSM10Q969L4 123 aaKnown RBP1.86□□□□□ -2.11
CCDC7-213ENST00000639290 TCEAL7Q9BRU2 100 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 TRGV4A0A0C4DH28 118 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 E7EUB6 86 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 KRASP01116 189 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 IGKV1-5P01602 117 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 TRAPPC2P0DI81 140 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 TRAPPC2BP0DI82 140 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 PKIAP61925 76 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 PRR15Q8IV56 129 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 SLC25A21Q9BQT8 299 aaPredicted RBP1.86□□□□□ -2.11
CCDC7-213ENST00000639290 CKLFQ9UBR5 152 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 NDUFA12Q9UI09 145 aa1.86□□□□□ -2.11
CCDC7-213ENST00000639290 ZNF73O43830 326 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-213ENST00000639290 TGFBR1P36897 503 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 RPL30P62888 115 aaKnown RBP1.85□□□□□ -2.11
CCDC7-213ENST00000639290 HIST1H1AQ02539 215 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-213ENST00000639290 MRPL51Q4U2R6 128 aaKnown RBP1.85□□□□□ -2.11
CCDC7-213ENST00000639290 C1orf137Q5JT78 98 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 ZFAND2AQ8N6M9 145 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 CARD19Q96LW7 228 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 GABARAPL1Q9H0R8 117 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 TP73-AS1Q9UF72 201 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 K7ERU9 68 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 M0R2Z0 102 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 GEMIN2O14893 280 aaKnown RBP1.85□□□□□ -2.11
CCDC7-213ENST00000639290 DPM2O94777 84 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 TRGC2P03986 189 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 UCHL1P09936 223 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 CSN1S1P47710 185 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 ZNF80P51504 273 aaPredicted RBP1.85□□□□□ -2.11
CCDC7-213ENST00000639290 TAS2R30P59541 319 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 FAM229BQ4G0N7 80 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 AADACL3Q5VUY0 350 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 RASL11AQ6T310 242 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 LHFPL1Q86WI0 220 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 LINC00052Q96N35 136 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 ODF3Q96PU9 254 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 SMIM3Q9BZL3 60 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 PRR34Q9NV39 138 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 IL36BQ9NZH7 164 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 ERG28Q9UKR5 140 aa1.85□□□□□ -2.11
CCDC7-213ENST00000639290 TRGV1A0A0A0MS02 117 aa1.84□□□□□ -2.11
CCDC7-213ENST00000639290 A6NIN4 97 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms