RNA–Protein interactions for RNA: ENST00000638952.1

HNRNPU-217, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 5,678 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-217ENST00000638952 FREM1Q5H8C1 2179 aa12.85□□□□□ -0.35
HNRNPU-217ENST00000638952 SPTAN1Q13813 2472 aaKnown RBP12.85□□□□□ -0.35
HNRNPU-217ENST00000638952 MUC22E2RYF6 1773 aaPredicted RBP12.84□□□□□ -0.35
HNRNPU-217ENST00000638952 ODF3Q96PU9 254 aa12.84□□□□□ -0.35
HNRNPU-217ENST00000638952 Q6Q795 121 aa12.84□□□□□ -0.35
HNRNPU-217ENST00000638952 Q6ZTI0 123 aa12.84□□□□□ -0.35
HNRNPU-217ENST00000638952 PCNX3Q9H6A9 2034 aa12.84□□□□□ -0.35
HNRNPU-217ENST00000638952 Q6JHZ5 121 aa12.84□□□□□ -0.35
HNRNPU-217ENST00000638952 TNFRSF13BO14836 293 aaPredicted RBP12.83□□□□□ -0.36
HNRNPU-217ENST00000638952 TRBV6-5A0A0K0K1A5 114 aa12.83□□□□□ -0.36
HNRNPU-217ENST00000638952 C9orf85Q96MD7 179 aa12.83□□□□□ -0.36
HNRNPU-217ENST00000638952 PCDH15Q96QU1 1955 aa12.82□□□□□ -0.36
HNRNPU-217ENST00000638952 C19orf84I3L1E1 186 aa12.82□□□□□ -0.36
HNRNPU-217ENST00000638952 XAGE1AQ9HD64 81 aa12.82□□□□□ -0.36
HNRNPU-217ENST00000638952 H7C423 109 aa12.82□□□□□ -0.36
HNRNPU-217ENST00000638952 EBI3Q14213 229 aa12.81□□□□□ -0.36
HNRNPU-217ENST00000638952 IGHV4-30-4P0DP06 118 aa12.81□□□□□ -0.36
HNRNPU-217ENST00000638952 IGHV4-31P0DP07 118 aa12.81□□□□□ -0.36
HNRNPU-217ENST00000638952 Q6ZQY7 126 aa12.81□□□□□ -0.36
HNRNPU-217ENST00000638952 K7EQG2 157 aa12.8□□□□□ -0.36
HNRNPU-217ENST00000638952 KIR2DL5BQ8NHK3 375 aa12.8□□□□□ -0.36
HNRNPU-217ENST00000638952 FAM222AQ5U5X8 452 aa12.8□□□□□ -0.36
HNRNPU-217ENST00000638952 A0A087WZ39 114 aa12.8□□□□□ -0.36
HNRNPU-217ENST00000638952 DNAJC9-AS1A6NH13 148 aa12.8□□□□□ -0.36
HNRNPU-217ENST00000638952 A8MZ25 164 aa12.8□□□□□ -0.36
HNRNPU-217ENST00000638952 NBASA2RRP1 2371 aa12.8□□□□□ -0.36
HNRNPU-217ENST00000638952 CACNA1HO95180 2353 aa12.79□□□□□ -0.36
HNRNPU-217ENST00000638952 PCNX2A6NKB5 2137 aa12.79□□□□□ -0.36
HNRNPU-217ENST00000638952 FAM19A5Q7Z5A7 132 aaPredicted RBP12.79□□□□□ -0.36
HNRNPU-217ENST00000638952 M0QY20 66 aa12.78□□□□□ -0.36
HNRNPU-217ENST00000638952 POM121L12Q8N7R1 296 aa12.78□□□□□ -0.36
HNRNPU-217ENST00000638952 LINC00526Q96FQ7 95 aa12.78□□□□□ -0.36
HNRNPU-217ENST00000638952 C14orf177Q52M58 125 aa12.78□□□□□ -0.36
HNRNPU-217ENST00000638952 WFDC10AQ9H1F0 79 aa12.78□□□□□ -0.36
HNRNPU-217ENST00000638952 CREBBPQ92793 2442 aa12.78□□□□□ -0.36
HNRNPU-217ENST00000638952 TRAV7A0A075B6U4 112 aa12.77□□□□□ -0.36
HNRNPU-217ENST00000638952 PROK1P58294 105 aa12.77□□□□□ -0.36
HNRNPU-217ENST00000638952 DSCAML1Q8TD84 2053 aa12.77□□□□□ -0.37
HNRNPU-217ENST00000638952 FSTL3O95633 263 aa12.76□□□□□ -0.37
HNRNPU-217ENST00000638952 CELA1Q9UNI1 258 aa12.76□□□□□ -0.37
HNRNPU-217ENST00000638952 NRACQ8N912 160 aa12.76□□□□□ -0.37
HNRNPU-217ENST00000638952 SMIM11BQ8TCY0 68 aa12.76□□□□□ -0.37
HNRNPU-217ENST00000638952 NANOS2P60321 138 aaKnown RBP12.75□□□□□ -0.37
HNRNPU-217ENST00000638952 SPINK6Q6UWN8 80 aa12.75□□□□□ -0.37
HNRNPU-217ENST00000638952 PRR9Q5T870 116 aa12.75□□□□□ -0.37
HNRNPU-217ENST00000638952 Q6YL49 198 aa12.75□□□□□ -0.37
HNRNPU-217ENST00000638952 MED12LQ86YW9 2145 aa12.75□□□□□ -0.37
HNRNPU-217ENST00000638952 C11orf21Q9P2W6 132 aa12.74□□□□□ -0.37
HNRNPU-217ENST00000638952 GAS8-AS1O95177 125 aa12.74□□□□□ -0.37
HNRNPU-217ENST00000638952 C10orf99Q6UWK7 81 aa12.74□□□□□ -0.37
HNRNPU-217ENST00000638952 IGKV2-28A0A075B6P5 120 aa12.73□□□□□ -0.37
HNRNPU-217ENST00000638952 IGKV2D-28P01615 120 aa12.73□□□□□ -0.37
HNRNPU-217ENST00000638952 DEFB114Q30KQ6 69 aa12.73□□□□□ -0.37
HNRNPU-217ENST00000638952 Q6ZS46 218 aa12.73□□□□□ -0.37
HNRNPU-217ENST00000638952 PLCE1Q9P212 2302 aa12.73□□□□□ -0.37
HNRNPU-217ENST00000638952 Q8N976 141 aa12.73□□□□□ -0.37
HNRNPU-217ENST00000638952 PSPHP1O15172 72 aa12.73□□□□□ -0.37
HNRNPU-217ENST00000638952 KIAA1549Q9HCM3 1950 aa12.72□□□□□ -0.37
HNRNPU-217ENST00000638952 MED13LQ71F56 2210 aa12.72□□□□□ -0.37
HNRNPU-217ENST00000638952 LINC00310P59036 64 aa12.72□□□□□ -0.37
HNRNPU-217ENST00000638952 C11orf71Q6IPW1 123 aa12.72□□□□□ -0.37
HNRNPU-217ENST00000638952 PPDPFQ9H3Y8 114 aa12.72□□□□□ -0.37
HNRNPU-217ENST00000638952 A0A087WVE0 104 aa12.72□□□□□ -0.37
HNRNPU-217ENST00000638952 KLK5Q9Y337 293 aaPredicted RBP12.71□□□□□ -0.37
HNRNPU-217ENST00000638952 CRYGDP07320 174 aa12.71□□□□□ -0.38
HNRNPU-217ENST00000638952 RNASE3P12724 160 aaKnown RBP12.71□□□□□ -0.38
HNRNPU-217ENST00000638952 DHRS4-AS1Q9P1J3 65 aa12.71□□□□□ -0.38
HNRNPU-217ENST00000638952 CSDC2Q9Y534 153 aaKnown RBP12.71□□□□□ -0.38
HNRNPU-217ENST00000638952 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.71□□□□□ -0.384e-7■■■■■ 28.2
HNRNPU-217ENST00000638952 PYGO1Q9Y3Y4 419 aa12.7□□□□□ -0.38
HNRNPU-217ENST00000638952 TRBV6-8A0A0A6YYG3 113 aa12.7□□□□□ -0.38
HNRNPU-217ENST00000638952 TSHBP01222 138 aa12.7□□□□□ -0.38
HNRNPU-217ENST00000638952 Q8N6K4 173 aa12.69□□□□□ -0.38
HNRNPU-217ENST00000638952 PRYO14603 147 aa12.69□□□□□ -0.38
HNRNPU-217ENST00000638952 M0R378 163 aa12.67□□□□□ -0.38
HNRNPU-217ENST00000638952 C11orf45Q8TAV5 145 aa12.67□□□□□ -0.38
HNRNPU-217ENST00000638952 LINC00208Q96KT6 92 aa12.67□□□□□ -0.38
HNRNPU-217ENST00000638952 ATG2AQ2TAZ0 1938 aa12.67□□□□□ -0.38
HNRNPU-217ENST00000638952 SYCNQ0VAF6 134 aa12.67□□□□□ -0.38
HNRNPU-217ENST00000638952 LOC107984640A0A0U1RRK4 108 aa12.67□□□□□ -0.38
HNRNPU-217ENST00000638952 URB1-AS1Q96HZ7 61 aa12.66□□□□□ -0.38
HNRNPU-217ENST00000638952 PRORYQ9H606 182 aa12.66□□□□□ -0.38
HNRNPU-217ENST00000638952 NTM-AS1Q6ZSK4 140 aa12.65□□□□□ -0.38
HNRNPU-217ENST00000638952 TECTAO75443 2155 aa12.65□□□□□ -0.38
HNRNPU-217ENST00000638952 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP12.64□□□□□ -0.39
HNRNPU-217ENST00000638952 TRBV7-6A0A0J9YX20 115 aa12.63□□□□□ -0.39
HNRNPU-217ENST00000638952 ZNF73O43830 326 aaPredicted RBP12.63□□□□□ -0.39
HNRNPU-217ENST00000638952 BEAN1Q3B7T3 259 aa12.62□□□□□ -0.39
HNRNPU-217ENST00000638952 UBE2D4Q9Y2X8 147 aa12.62□□□□□ -0.39
HNRNPU-217ENST00000638952 TRBV7-7A0A0K0K1E9 115 aa12.62□□□□□ -0.39
HNRNPU-217ENST00000638952 TRBV6-4A0A1B0GX49 114 aa12.62□□□□□ -0.39
HNRNPU-217ENST00000638952 KLLNB2CW77 178 aa12.61□□□□□ -0.39
HNRNPU-217ENST00000638952 CRIP2P52943 208 aaPredicted RBP12.61□□□□□ -0.39
HNRNPU-217ENST00000638952 PRM2P04554 102 aa12.61□□□□□ -0.39
HNRNPU-217ENST00000638952 UBE2D2P62837 147 aa12.61□□□□□ -0.39
HNRNPU-217ENST00000638952 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.61□□□□□ -0.39
HNRNPU-217ENST00000638952 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.61□□□□□ -0.39
HNRNPU-217ENST00000638952 CD164L2Q6UWJ8 174 aa12.6□□□□□ -0.39
HNRNPU-217ENST00000638952 POLR2KP53803 58 aaKnown RBP12.6□□□□□ -0.39
HNRNPU-217ENST00000638952 RPL37AP8A6NKH3 93 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms