RNA–Protein interactions for RNA: ENST00000638680.1

SCARB2-213, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 5,817 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-213ENST00000638680 C4orf48Q5BLP8 95 aa13.68□□□□□ -0.22
SCARB2-213ENST00000638680 TRBV6-4A0A1B0GX49 114 aa13.67□□□□□ -0.22
SCARB2-213ENST00000638680 FAM19A1Q7Z5A9 133 aa13.67□□□□□ -0.22
SCARB2-213ENST00000638680 IMUPQ9GZP8 106 aa13.67□□□□□ -0.22
SCARB2-213ENST00000638680 SMIM9A6NGZ8 99 aa13.67□□□□□ -0.22
SCARB2-213ENST00000638680 UBE2D4Q9Y2X8 147 aa13.67□□□□□ -0.22
SCARB2-213ENST00000638680 USP17L23D6RBM5 183 aa13.67□□□□□ -0.22
SCARB2-213ENST00000638680 SEC61GP60059 68 aa13.66□□□□□ -0.22
SCARB2-213ENST00000638680 SNURFQ9Y675 71 aa13.66□□□□□ -0.22
SCARB2-213ENST00000638680 IGHV4-31P0DP07 118 aa13.66□□□□□ -0.22
SCARB2-213ENST00000638680 CCKP06307 115 aa13.66□□□□□ -0.22
SCARB2-213ENST00000638680 TNCP24821 2201 aa13.66□□□□□ -0.22
SCARB2-213ENST00000638680 FAM240AA0A1B0GVK7 77 aa13.65□□□□□ -0.22
SCARB2-213ENST00000638680 POLR2KP53803 58 aaKnown RBP13.65□□□□□ -0.22
SCARB2-213ENST00000638680 WFDC10BQ8IUB3 73 aa13.65□□□□□ -0.22
SCARB2-213ENST00000638680 URB1-AS1Q96HZ7 61 aa13.65□□□□□ -0.22
SCARB2-213ENST00000638680 LTBP2Q14767 1821 aa13.65□□□□□ -0.22
SCARB2-213ENST00000638680 C3orf84H3BNL1 204 aa13.65□□□□□ -0.23
SCARB2-213ENST00000638680 CRYGDP07320 174 aa13.65□□□□□ -0.23
SCARB2-213ENST00000638680 C1orf158Q8N1D5 194 aa13.64□□□□□ -0.23
SCARB2-213ENST00000638680 SMIM11BQ8TCY0 68 aa13.64□□□□□ -0.23
SCARB2-213ENST00000638680 PCDH15Q96QU1 1955 aa13.64□□□□□ -0.23
SCARB2-213ENST00000638680 Q8N6K4 173 aa13.63□□□□□ -0.23
SCARB2-213ENST00000638680 KLLNB2CW77 178 aa13.62□□□□□ -0.23
SCARB2-213ENST00000638680 FAM19A5Q7Z5A7 132 aaPredicted RBP13.62□□□□□ -0.23
SCARB2-213ENST00000638680 COX7CP15954 63 aa13.62□□□□□ -0.23
SCARB2-213ENST00000638680 UBE2D1P51668 147 aa13.62□□□□□ -0.23
SCARB2-213ENST00000638680 C11orf71Q6IPW1 123 aa13.62□□□□□ -0.23
SCARB2-213ENST00000638680 C9orf85Q96MD7 179 aa13.61□□□□□ -0.23
SCARB2-213ENST00000638680 PRM2P04554 102 aa13.61□□□□□ -0.23
SCARB2-213ENST00000638680 KLK5Q9Y337 293 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-213ENST00000638680 Q6ZQY7 126 aa13.61□□□□□ -0.23
SCARB2-213ENST00000638680 TANC2Q9HCD6 1990 aa13.61□□□□□ -0.23
SCARB2-213ENST00000638680 LOC100131303A0A0U1RQF7 123 aa13.61□□□□□ -0.23
SCARB2-213ENST00000638680 LINC00482Q8N8I6 264 aa13.61□□□□□ -0.23
SCARB2-213ENST00000638680 BBC3Q96PG8 261 aaPredicted RBP13.61□□□□□ -0.23
SCARB2-213ENST00000638680 POM121L12Q8N7R1 296 aa13.6□□□□□ -0.23
SCARB2-213ENST00000638680 C14orf177Q52M58 125 aa13.6□□□□□ -0.23
SCARB2-213ENST00000638680 ZFHX2Q9C0A1 2572 aaPredicted RBP13.6□□□□□ -0.23
SCARB2-213ENST00000638680 LINC00526Q96FQ7 95 aa13.59□□□□□ -0.23
SCARB2-213ENST00000638680 CNFNQ9BYD5 112 aa13.59□□□□□ -0.23
SCARB2-213ENST00000638680 MRPS36P82909 103 aaKnown RBP13.58□□□□□ -0.23
SCARB2-213ENST00000638680 IGKV2-28A0A075B6P5 120 aa13.58□□□□□ -0.24
SCARB2-213ENST00000638680 IGKV2D-28P01615 120 aa13.58□□□□□ -0.24
SCARB2-213ENST00000638680 Q6ZSV7 163 aa13.58□□□□□ -0.24
SCARB2-213ENST00000638680 DEFB131BA0A096LNP1 70 aa13.58□□□□□ -0.24
SCARB2-213ENST00000638680 A0A087WZ39 114 aa13.57□□□□□ -0.24
SCARB2-213ENST00000638680 NDUFC1O43677 76 aa13.57□□□□□ -0.24
SCARB2-213ENST00000638680 CD164L2Q6UWJ8 174 aa13.57□□□□□ -0.24
SCARB2-213ENST00000638680 LINC00959A0A1B0GUT2 108 aa13.57□□□□□ -0.24
SCARB2-213ENST00000638680 IGIPA6NJ69 53 aa13.57□□□□□ -0.24
SCARB2-213ENST00000638680 ATP5EP56381 51 aaPredicted RBP13.57□□□□□ -0.24
SCARB2-213ENST00000638680 MRPL55Q7Z7F7 128 aaKnown RBP13.56□□□□□ -0.24
SCARB2-213ENST00000638680 SYCNQ0VAF6 134 aa13.56□□□□□ -0.24
SCARB2-213ENST00000638680 LRRC75A-AS1Q8N1F1 130 aa13.56□□□□□ -0.24
SCARB2-213ENST00000638680 CASC2Q6XLA1 102 aa13.56□□□□□ -0.24
SCARB2-213ENST00000638680 FAM19A3Q7Z5A8 133 aa13.55□□□□□ -0.24
SCARB2-213ENST00000638680 A0A0J9YWU9 116 aa13.55□□□□□ -0.24
SCARB2-213ENST00000638680 C18orf65Q6ZTR6 163 aa13.54□□□□□ -0.24
SCARB2-213ENST00000638680 ZNF702PQ9H963 129 aa13.54□□□□□ -0.24
SCARB2-213ENST00000638680 LINC00694P0DN24 101 aa13.54□□□□□ -0.24
SCARB2-213ENST00000638680 MIFP14174 115 aa13.53□□□□□ -0.24
SCARB2-213ENST00000638680 Q6JHZ5 121 aa13.53□□□□□ -0.24
SCARB2-213ENST00000638680 PSMG3-AS1Q96PY0 264 aa13.52□□□□□ -0.24
SCARB2-213ENST00000638680 WFDC10AQ9H1F0 79 aa13.52□□□□□ -0.24
SCARB2-213ENST00000638680 FAM208BQ5VWN6 2430 aa13.52□□□□□ -0.24
SCARB2-213ENST00000638680 PLXNB1O43157 2135 aa13.52□□□□□ -0.25
SCARB2-213ENST00000638680 HCFC1P51610 2035 aa13.52□□□□□ -0.25
SCARB2-213ENST00000638680 M0R378 163 aa13.52□□□□□ -0.25
SCARB2-213ENST00000638680 CRIP2P52943 208 aaPredicted RBP13.52□□□□□ -0.25
SCARB2-213ENST00000638680 WFDC13Q8IUB5 93 aa13.52□□□□□ -0.25
SCARB2-213ENST00000638680 PRORYQ9H606 182 aa13.52□□□□□ -0.25
SCARB2-213ENST00000638680 IGLV4-69A0A075B6H9 119 aa13.51□□□□□ -0.25
SCARB2-213ENST00000638680 CLUHP3Q96NS8 147 aa13.51□□□□□ -0.25
SCARB2-213ENST00000638680 Q6Q795 121 aa13.51□□□□□ -0.25
SCARB2-213ENST00000638680 PRR4Q16378 134 aa13.51□□□□□ -0.25
SCARB2-213ENST00000638680 ATG2AQ2TAZ0 1938 aa13.51□□□□□ -0.25
SCARB2-213ENST00000638680 COL4A4P53420 1690 aaPredicted RBP13.5□□□□□ -0.25
SCARB2-213ENST00000638680 IGLV1-40P01703 118 aa13.5□□□□□ -0.25
SCARB2-213ENST00000638680 V9GYY9 64 aa13.5□□□□□ -0.25
SCARB2-213ENST00000638680 CDC42SE2Q9NRR3 84 aa13.5□□□□□ -0.25
SCARB2-213ENST00000638680 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.49□□□□□ -0.25
SCARB2-213ENST00000638680 PTPRQQ9UMZ3 2332 aa13.49□□□□□ -0.25
SCARB2-213ENST00000638680 TECTAO75443 2155 aa13.48□□□□□ -0.25
SCARB2-213ENST00000638680 TSPEAR-AS2P59090 65 aa13.48□□□□□ -0.25
SCARB2-213ENST00000638680 DHRS4-AS1Q9P1J3 65 aa13.48□□□□□ -0.25
SCARB2-213ENST00000638680 PRR14LQ5THK1 2151 aa13.48□□□□□ -0.25
SCARB2-213ENST00000638680 UBE2D3P61077 147 aa13.47□□□□□ -0.25
SCARB2-213ENST00000638680 UBE2D2P62837 147 aa13.47□□□□□ -0.25
SCARB2-213ENST00000638680 COX17Q14061 63 aa13.47□□□□□ -0.25
SCARB2-213ENST00000638680 PPDPFQ9H3Y8 114 aa13.47□□□□□ -0.25
SCARB2-213ENST00000638680 HILS1P60008 231 aa13.47□□□□□ -0.25
SCARB2-213ENST00000638680 FAM30AQ9NZY2 134 aa13.47□□□□□ -0.25
SCARB2-213ENST00000638680 ZNF73O43830 326 aaPredicted RBP13.47□□□□□ -0.25
SCARB2-213ENST00000638680 EDN2P20800 178 aa13.47□□□□□ -0.25
SCARB2-213ENST00000638680 ANKHD1Q8IWZ3 2542 aaKnown RBP13.47□□□□□ -0.25
SCARB2-213ENST00000638680 LINC00242Q5T6M2 205 aa13.46□□□□□ -0.25
SCARB2-213ENST00000638680 LRCOL1A6NCL2 159 aa13.46□□□□□ -0.25
SCARB2-213ENST00000638680 RPL37AP8A6NKH3 93 aa13.45□□□□□ -0.26
SCARB2-213ENST00000638680 KIR2DL5BQ8NHK3 375 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms