RNA–Protein interactions for RNA: ENST00000638295.1

SCARB2-207, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-207ENST00000638295 LINC00269Q8N2A0 174 aa4.9□□□□□ -1.63
SCARB2-207ENST00000638295 SND1-IT1Q9HBX3 110 aa4.9□□□□□ -1.63
SCARB2-207ENST00000638295 ZNF80P51504 273 aaPredicted RBP4.89□□□□□ -1.63
SCARB2-207ENST00000638295 COL6A3P12111 3177 aa4.89□□□□□ -1.63
SCARB2-207ENST00000638295 TRBV6-5A0A0K0K1A5 114 aa4.89□□□□□ -1.63
SCARB2-207ENST00000638295 NPSP0C0P6 89 aa4.89□□□□□ -1.63
SCARB2-207ENST00000638295 CHCHD10Q8WYQ3 142 aaPredicted RBP4.89□□□□□ -1.63
SCARB2-207ENST00000638295 Q8N976 141 aa4.89□□□□□ -1.63
SCARB2-207ENST00000638295 LINC00474Q9P2X8 69 aa4.89□□□□□ -1.63
SCARB2-207ENST00000638295 C11orf86A6NJI1 115 aa4.89□□□□□ -1.63
SCARB2-207ENST00000638295 KIR3DS1Q14943 382 aa4.89□□□□□ -1.63
SCARB2-207ENST00000638295 KRTAP21-3Q3LHN1 58 aa4.89□□□□□ -1.63
SCARB2-207ENST00000638295 OPRPNQ99935 248 aaPredicted RBP4.89□□□□□ -1.63
SCARB2-207ENST00000638295 TP53TG3Q9ULZ0 132 aa4.89□□□□□ -1.63
SCARB2-207ENST00000638295 SZT2Q5T011 3432 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 FUSP35637 526 aaKnown RBP eCLIP4.88□□□□□ -1.63
SCARB2-207ENST00000638295 TRIOO75962 3097 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 SYCNQ0VAF6 134 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 ZNF124Q15973 351 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 COA6Q5JTJ3 125 aaKnown RBP4.88□□□□□ -1.63
SCARB2-207ENST00000638295 NEXN-AS1Q8NBZ9 246 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 CARD19Q96LW7 228 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 UBL5Q9BZL1 73 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 TINCRA0A1B0GVN0 87 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 MPV17L2Q567V2 206 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 GDF5OSQ5U4N7 250 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 WFDC9Q8NEX5 89 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 MUC7Q8TAX7 377 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 DKK2Q9UBU2 259 aa4.88□□□□□ -1.63
SCARB2-207ENST00000638295 DIRC1Q969H9 104 aa4.87□□□□□ -1.63
SCARB2-207ENST00000638295 WFDC10AQ9H1F0 79 aa4.87□□□□□ -1.63
SCARB2-207ENST00000638295 NANOS2P60321 138 aaKnown RBP4.87□□□□□ -1.63
SCARB2-207ENST00000638295 RPL39P62891 51 aaKnown RBP4.87□□□□□ -1.63
SCARB2-207ENST00000638295 BAALCQ8WXS3 180 aa4.87□□□□□ -1.63
SCARB2-207ENST00000638295 C9orf85Q96MD7 179 aa4.87□□□□□ -1.63
SCARB2-207ENST00000638295 LAMA2P24043 3122 aaKnown RBP4.87□□□□□ -1.63
SCARB2-207ENST00000638295 M0QY20 66 aa4.87□□□□□ -1.63
SCARB2-207ENST00000638295 RBX1P62877 108 aa4.87□□□□□ -1.63
SCARB2-207ENST00000638295 IGKV2-24A0A0C4DH68 120 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 C9JAW5 83 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 ORMDL1Q9P0S3 153 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 PYGO1Q9Y3Y4 419 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 COL27A1Q8IZC6 1860 aaPredicted RBP4.86□□□□□ -1.63
SCARB2-207ENST00000638295 A0A1B0GXF2 115 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 E9PLD3 99 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 NDUFB1O75438 58 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 Q6ZUT4 128 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 CFAP54Q96N23 3096 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 C3orf84H3BNL1 204 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 CD164L2Q6UWJ8 174 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 FLNCQ14315 2725 aa4.86□□□□□ -1.63
SCARB2-207ENST00000638295 IGLV2-18A0A075B6J9 118 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 TRBV27A0A0K0K1C4 114 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 K7EP13 123 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 LINC00467Q9BRT7 94 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 PLA2G2EQ9NZK7 142 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 IGHV4-4A0A075B6R2 117 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 IGLV2-8P01709 118 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 CFC1BP0CG36 223 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 CFC1P0CG37 223 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 IGLC3P0DOY3 106 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 HIGD2BQ4VC39 106 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 PYY3Q5JQD4 70 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 CEND1Q8N111 149 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 SPANXDQ9BXN6 97 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 IGLV4-69A0A075B6H9 119 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 WDFY4Q6ZS81 3184 aa4.85□□□□□ -1.63
SCARB2-207ENST00000638295 A0A1B0GV90 55 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 CYSRT1A8MQ03 144 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 FHL3Q13643 280 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 A4D1N5 150 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 IBA57-AS1B1ANH7 110 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 BEAN1Q3B7T3 259 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 RETNQ9HD89 108 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 TEX15Q9BXT5 2789 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 RNASE3P12724 160 aaKnown RBP4.84□□□□□ -1.63
SCARB2-207ENST00000638295 GAGE2AQ6NT46 116 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 PTH2Q96A98 100 aa4.84□□□□□ -1.63
SCARB2-207ENST00000638295 ZNF706Q9Y5V0 76 aaPredicted RBP4.84□□□□□ -1.63
SCARB2-207ENST00000638295 A0A087WZ39 114 aa4.84□□□□□ -1.64
SCARB2-207ENST00000638295 LOC107984640A0A0U1RRK4 108 aa4.84□□□□□ -1.64
SCARB2-207ENST00000638295 MIR7-3HGQ8N6C7 128 aa4.84□□□□□ -1.64
SCARB2-207ENST00000638295 BPTFQ12830 3046 aa4.83□□□□□ -1.64
SCARB2-207ENST00000638295 F8WDY8 70 aa4.83□□□□□ -1.64
SCARB2-207ENST00000638295 MRPS36P82909 103 aaKnown RBP4.83□□□□□ -1.64
SCARB2-207ENST00000638295 M0R2N4 97 aa4.83□□□□□ -1.64
SCARB2-207ENST00000638295 UBE2D3P61077 147 aa4.83□□□□□ -1.64
SCARB2-207ENST00000638295 UBE2D2P62837 147 aa4.83□□□□□ -1.64
SCARB2-207ENST00000638295 DEFB105AQ8NG35 78 aa4.83□□□□□ -1.64
SCARB2-207ENST00000638295 NBEAL1Q6ZS30 2694 aa4.83□□□□□ -1.64
SCARB2-207ENST00000638295 PDE6GP18545 87 aa4.83□□□□□ -1.64
SCARB2-207ENST00000638295 COX7BP24311 80 aa4.83□□□□□ -1.64
SCARB2-207ENST00000638295 HIST1H4AP62805 103 aaKnown RBP4.83□□□□□ -1.64
SCARB2-207ENST00000638295 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.82□□□□□ -1.64
SCARB2-207ENST00000638295 C1orf134Q5TEV5 83 aa4.82□□□□□ -1.64
SCARB2-207ENST00000638295 SPANXCQ9NY87 97 aa4.82□□□□□ -1.64
SCARB2-207ENST00000638295 HIGD1BQ9P298 99 aa4.82□□□□□ -1.64
SCARB2-207ENST00000638295 IGLV2-11P01706 119 aa4.82□□□□□ -1.64
SCARB2-207ENST00000638295 SPATA12Q7Z6I5 190 aa4.82□□□□□ -1.64
SCARB2-207ENST00000638295 OCIAD2Q56VL3 154 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms