RNA–Protein interactions for RNA: ENST00000638141.1

CAPN3-221, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 2,358 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-221ENST00000638141 A0A087WVE0 104 aa8.75□□□□□ -1.01
CAPN3-221ENST00000638141 IGHV3-16A0A0C4DH30 117 aa8.75□□□□□ -1.01
CAPN3-221ENST00000638141 ZNF843Q8N446 348 aa8.75□□□□□ -1.01
CAPN3-221ENST00000638141 MYO18BQ8IUG5 2567 aa8.74□□□□□ -1.01
CAPN3-221ENST00000638141 SMIM26A0A096LP01 95 aa8.74□□□□□ -1.01
CAPN3-221ENST00000638141 IGLV5-39A0A0G2JS06 123 aa8.74□□□□□ -1.01
CAPN3-221ENST00000638141 TRBV10-3A0A0K0K1G6 114 aa8.74□□□□□ -1.01
CAPN3-221ENST00000638141 RBMY1BA6NDE4 496 aaKnown RBP8.73□□□□□ -1.01
CAPN3-221ENST00000638141 RBMY1EA6NEQ0 496 aaKnown RBP8.73□□□□□ -1.01
CAPN3-221ENST00000638141 RBMY1DP0C7P1 496 aaKnown RBP8.73□□□□□ -1.01
CAPN3-221ENST00000638141 RBMY1A1P0DJD3 496 aaKnown RBP8.73□□□□□ -1.01
CAPN3-221ENST00000638141 RBMY1CP0DJD4 496 aa8.73□□□□□ -1.01
CAPN3-221ENST00000638141 RBMY1FQ15415 496 aaKnown RBP8.73□□□□□ -1.01
CAPN3-221ENST00000638141 C16orf95Q9H693 158 aa8.73□□□□□ -1.01
CAPN3-221ENST00000638141 POLEQ07864 2286 aa8.73□□□□□ -1.01
CAPN3-221ENST00000638141 GHRHP01286 108 aa8.73□□□□□ -1.01
CAPN3-221ENST00000638141 FAM74A4Q5TZK3 123 aa8.73□□□□□ -1.01
CAPN3-221ENST00000638141 SETXQ7Z333 2677 aaKnown RBP8.73□□□□□ -1.01
CAPN3-221ENST00000638141 TRAV13-2A0A0B4J235 113 aa8.72□□□□□ -1.01
CAPN3-221ENST00000638141 A8MZ25 164 aa8.72□□□□□ -1.01
CAPN3-221ENST00000638141 LYNX1G3V0Z9 82 aa8.72□□□□□ -1.01
CAPN3-221ENST00000638141 LYNX1P0DP58 116 aa8.72□□□□□ -1.01
CAPN3-221ENST00000638141 C19orf54Q5BKX5 351 aa8.72□□□□□ -1.01
CAPN3-221ENST00000638141 SOSTDC1Q6X4U4 206 aa8.72□□□□□ -1.01
CAPN3-221ENST00000638141 WNK2Q9Y3S1 2297 aa8.72□□□□□ -1.01
CAPN3-221ENST00000638141 RS1O15537 224 aa8.72□□□□□ -1.01
CAPN3-221ENST00000638141 RPL35AP18077 110 aaKnown RBP8.72□□□□□ -1.01
CAPN3-221ENST00000638141 LYPD5Q6UWN5 251 aa8.72□□□□□ -1.01
CAPN3-221ENST00000638141 PCNX1Q96RV3 2341 aa8.71□□□□□ -1.01
CAPN3-221ENST00000638141 XCL1P47992 114 aa8.71□□□□□ -1.01
CAPN3-221ENST00000638141 XCL2Q9UBD3 114 aa8.71□□□□□ -1.01
CAPN3-221ENST00000638141 H7BZZ5 65 aa8.71□□□□□ -1.02
CAPN3-221ENST00000638141 C14orf132Q9NPU4 83 aa8.71□□□□□ -1.02
CAPN3-221ENST00000638141 H0YGX0 51 aa8.7□□□□□ -1.02
CAPN3-221ENST00000638141 H3BUA1 57 aa8.7□□□□□ -1.02
CAPN3-221ENST00000638141 TRBV12-3P01733 135 aa8.7□□□□□ -1.02
CAPN3-221ENST00000638141 HIVEP3Q5T1R4 2406 aa8.7□□□□□ -1.02
CAPN3-221ENST00000638141 FLNBO75369 2602 aaKnown RBP8.7□□□□□ -1.02
CAPN3-221ENST00000638141 ABCA4P78363 2273 aa8.7□□□□□ -1.02
CAPN3-221ENST00000638141 SEC61GP60059 68 aa8.7□□□□□ -1.02
CAPN3-221ENST00000638141 FAM19A3Q7Z5A8 133 aa8.7□□□□□ -1.02
CAPN3-221ENST00000638141 Q9H8V8 135 aa8.7□□□□□ -1.02
CAPN3-221ENST00000638141 KNCNA6PVL3 124 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 G3V318 75 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 KLKP1Q107X0 134 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 CDKN2A-AS1Q9UH64 79 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 ADGRG4Q8IZF6 3080 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 UBR5O95071 2799 aaPredicted RBP8.69□□□□□ -1.02
CAPN3-221ENST00000638141 TENM4Q6N022 2769 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 USMG5Q96IX5 58 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 SIRPDQ9H106 197 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 Q9HAA7 133 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 V9GYY9 64 aa8.69□□□□□ -1.02
CAPN3-221ENST00000638141 HELZ2Q9BYK8 2649 aaKnown RBP8.69□□□□□ -1.02
CAPN3-221ENST00000638141 F6UB75 175 aa8.68□□□□□ -1.02
CAPN3-221ENST00000638141 CCKP06307 115 aa8.68□□□□□ -1.02
CAPN3-221ENST00000638141 PIK3CD-AS1Q5SR53 167 aa8.68□□□□□ -1.02
CAPN3-221ENST00000638141 CHCHD7Q9BUK0 85 aa8.68□□□□□ -1.02
CAPN3-221ENST00000638141 IGHV1OR15-1A0A075B7D0 117 aa8.68□□□□□ -1.02
CAPN3-221ENST00000638141 DEFB1P60022 68 aa8.68□□□□□ -1.02
CAPN3-221ENST00000638141 C20orf197Q8N268 126 aa8.68□□□□□ -1.02
CAPN3-221ENST00000638141 C5orf56Q8N8D9 126 aa8.68□□□□□ -1.02
CAPN3-221ENST00000638141 GCN1Q92616 2671 aaKnown RBP8.67□□□□□ -1.02
CAPN3-221ENST00000638141 TRAV7A0A075B6U4 112 aa8.67□□□□□ -1.02
CAPN3-221ENST00000638141 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-221ENST00000638141 ATP5EP56381 51 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-221ENST00000638141 FP248Q71RG6 208 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-221ENST00000638141 ZNF625Q96I27 306 aaPredicted RBP8.67□□□□□ -1.02
CAPN3-221ENST00000638141 UTP20O75691 2785 aaKnown RBP8.67□□□□□ -1.02
CAPN3-221ENST00000638141 GNLYP22749 145 aa8.66□□□□□ -1.02
CAPN3-221ENST00000638141 C9orf129Q5T035 196 aaKnown RBP8.66□□□□□ -1.02
CAPN3-221ENST00000638141 UNQ9165/PRO28630Q6UXU0 137 aa8.66□□□□□ -1.02
CAPN3-221ENST00000638141 USP9XQ93008 2570 aaPredicted RBP8.66□□□□□ -1.02
CAPN3-221ENST00000638141 A0A1W2PRX2 142 aa8.66□□□□□ -1.02
CAPN3-221ENST00000638141 K7EMT4 169 aa8.66□□□□□ -1.02
CAPN3-221ENST00000638141 CRPP02741 224 aa8.66□□□□□ -1.02
CAPN3-221ENST00000638141 RHPN1-AS1Q9BWJ2 59 aa8.65□□□□□ -1.02
CAPN3-221ENST00000638141 PKIGQ9Y2B9 76 aa8.65□□□□□ -1.02
CAPN3-221ENST00000638141 MOB4Q9Y3A3 225 aa8.65□□□□□ -1.02
CAPN3-221ENST00000638141 RNASE13Q5GAN3 156 aaKnown RBP8.64□□□□□ -1.03
CAPN3-221ENST00000638141 SPTBN1Q01082 2364 aaKnown RBP8.64□□□□□ -1.03
CAPN3-221ENST00000638141 C1orf195Q5TG92 126 aa8.64□□□□□ -1.03
CAPN3-221ENST00000638141 LRRK2Q5S007 2527 aa8.64□□□□□ -1.03
CAPN3-221ENST00000638141 A0A087WYN8 130 aa8.63□□□□□ -1.03
CAPN3-221ENST00000638141 NDUFC1O43677 76 aa8.63□□□□□ -1.03
CAPN3-221ENST00000638141 AVPP01185 164 aa8.63□□□□□ -1.03
CAPN3-221ENST00000638141 HILS1P60008 231 aa8.63□□□□□ -1.03
CAPN3-221ENST00000638141 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.63□□□□□ -1.03
CAPN3-221ENST00000638141 PKDREJQ9NTG1 2253 aa8.63□□□□□ -1.03
CAPN3-221ENST00000638141 SMIM1B2RUZ4 78 aa8.63□□□□□ -1.03
CAPN3-221ENST00000638141 ROS1P08922 2347 aa8.63□□□□□ -1.03
CAPN3-221ENST00000638141 TRAV23DV6A0A075B6W5 121 aa8.62□□□□□ -1.03
CAPN3-221ENST00000638141 JMJD7-PLA2G4BH0Y9G9 81 aa8.62□□□□□ -1.03
CAPN3-221ENST00000638141 HOXD3P31249 432 aaPredicted RBP8.62□□□□□ -1.03
CAPN3-221ENST00000638141 ZNF561-AS1K7EIQ3 104 aa8.62□□□□□ -1.03
CAPN3-221ENST00000638141 CCL21O00585 134 aa8.62□□□□□ -1.03
CAPN3-221ENST00000638141 SPTAN1Q13813 2472 aaKnown RBP8.61□□□□□ -1.03
CAPN3-221ENST00000638141 PLA2G2AP14555 144 aa8.61□□□□□ -1.03
CAPN3-221ENST00000638141 LINC00337Q8N6G1 96 aa8.61□□□□□ -1.03
CAPN3-221ENST00000638141 LINC00167Q96N53 147 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms