RNA–Protein interactions for RNA: ENST00000638041.1

MECP2-225, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 100 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-225ENST00000638041 MRPL54Q6P161 138 aaKnown RBP4.71□□□□□ -1.66
MECP2-225ENST00000638041 TMEM136Q6ZRR5 245 aa4.71□□□□□ -1.66
MECP2-225ENST00000638041 MRPL52Q86TS9 123 aaKnown RBP4.71□□□□□ -1.66
MECP2-225ENST00000638041 C7orf33Q8WU49 177 aa4.71□□□□□ -1.66
MECP2-225ENST00000638041 RPL39LQ96EH5 51 aaKnown RBP4.71□□□□□ -1.66
MECP2-225ENST00000638041 TIMM21Q9BVV7 248 aa4.71□□□□□ -1.66
MECP2-225ENST00000638041 SPANXA1Q9NS26 97 aa4.71□□□□□ -1.66
MECP2-225ENST00000638041 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.7□□□□□ -1.66
MECP2-225ENST00000638041 TGIF2-C20orf24A0A0A6YYL0 155 aa4.7□□□□□ -1.66
MECP2-225ENST00000638041 IGKV2-29A2NJV5 120 aaPredicted RBP4.7□□□□□ -1.66
MECP2-225ENST00000638041 GAGE12HA6NDE8 117 aa4.7□□□□□ -1.66
MECP2-225ENST00000638041 TNFRSF6BO95407 300 aa4.7□□□□□ -1.66
MECP2-225ENST00000638041 RPS10P46783 165 aaKnown RBP4.7□□□□□ -1.66
MECP2-225ENST00000638041 POLR2KP53803 58 aaKnown RBP4.7□□□□□ -1.66
MECP2-225ENST00000638041 MRPL51Q4U2R6 128 aaKnown RBP4.7□□□□□ -1.66
MECP2-225ENST00000638041 CD164L2Q6UWJ8 174 aa4.7□□□□□ -1.66
MECP2-225ENST00000638041 C20orf203Q8NBC4 194 aa4.7□□□□□ -1.66
MECP2-225ENST00000638041 PRELID3AQ96N28 172 aa4.7□□□□□ -1.66
MECP2-225ENST00000638041 NXT2Q9NPJ8 142 aaKnown RBP4.7□□□□□ -1.66
MECP2-225ENST00000638041 TMEM242Q9NWH2 141 aa4.7□□□□□ -1.66
MECP2-225ENST00000638041 Q9UF83 564 aa4.7□□□□□ -1.66
MECP2-225ENST00000638041 EPPK1P58107 5090 aaKnown RBP4.7□□□□□ -1.66
MECP2-225ENST00000638041 BIRC6Q9NR09 4857 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 COX7A2LO14548 114 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 MT-ND6P03923 174 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 NPSP0C0P6 89 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 INAFM2P0DMQ5 153 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 XCL1P47992 114 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 CNBPP62633 177 aaKnown RBP4.69□□□□□ -1.66
MECP2-225ENST00000638041 RHEBQ15382 184 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 C9orf163Q8N9P6 203 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 DEFB104AQ8WTQ1 72 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 CHCHD10Q8WYQ3 142 aaPredicted RBP4.69□□□□□ -1.66
MECP2-225ENST00000638041 CHAC1Q9BUX1 264 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 SMIM2Q9BVW6 85 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 SEC11CQ9BY50 192 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 SMCO4Q9NRQ5 59 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 CYSLTR1Q9Y271 337 aa4.69□□□□□ -1.66
MECP2-225ENST00000638041 IGLV4-60A0A075B6I1 120 aa4.68□□□□□ -1.66
MECP2-225ENST00000638041 LINC00959A0A1B0GUT2 108 aa4.68□□□□□ -1.66
MECP2-225ENST00000638041 D6R8Y8 96 aa4.68□□□□□ -1.66
MECP2-225ENST00000638041 ESDP10768 282 aa4.68□□□□□ -1.66
MECP2-225ENST00000638041 KRTAP10-1P60331 282 aa4.68□□□□□ -1.66
MECP2-225ENST00000638041 Q5VSD8 79 aa4.68□□□□□ -1.66
MECP2-225ENST00000638041 TEX43Q6ZNM6 134 aa4.68□□□□□ -1.66
MECP2-225ENST00000638041 CDC42SE2Q9NRR3 84 aa4.68□□□□□ -1.66
MECP2-225ENST00000638041 DNAH17Q9UFH2 4485 aa4.68□□□□□ -1.66
MECP2-225ENST00000638041 DNAH2Q9P225 4427 aa4.67□□□□□ -1.66
MECP2-225ENST00000638041 IFITM10A6NMD0 228 aa4.67□□□□□ -1.66
MECP2-225ENST00000638041 TSHBP01222 138 aa4.67□□□□□ -1.66
MECP2-225ENST00000638041 PRSS2P07478 247 aa4.67□□□□□ -1.66
MECP2-225ENST00000638041 RAB5BP61020 215 aa4.67□□□□□ -1.66
MECP2-225ENST00000638041 MRPS36P82909 103 aaKnown RBP4.67□□□□□ -1.66
MECP2-225ENST00000638041 Q8N3U1 123 aa4.67□□□□□ -1.66
MECP2-225ENST00000638041 PRSS3P2Q8NHM4 247 aa4.67□□□□□ -1.66
MECP2-225ENST00000638041 CARD19Q96LW7 228 aa4.67□□□□□ -1.66
MECP2-225ENST00000638041 PACRGQ96M98 296 aaPredicted RBP4.67□□□□□ -1.66
MECP2-225ENST00000638041 VCX2Q9H322 139 aa4.67□□□□□ -1.66
MECP2-225ENST00000638041 IGLV4-69A0A075B6H9 119 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 TRAV13-1A0A0B4J241 112 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 TMEM218A2RU14 115 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 SNAPINO95295 136 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 PRSS1P07477 247 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 SVBPQ8N300 66 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 OR10D4PQ8NGN7 298 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 TMEM141Q96I45 108 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 CAMK2N2Q96S95 79 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 PYGO1Q9Y3Y4 419 aa4.66□□□□□ -1.66
MECP2-225ENST00000638041 GVQW2A0A096LPI5 108 aaPredicted RBP4.65□□□□□ -1.67
MECP2-225ENST00000638041 LOC107984640A0A0U1RRK4 108 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 LOC389332A0A1B0GUA5 103 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 A0A1B0GXF2 115 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 SMKR1H3BMG3 65 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 SRSF3P84103 164 aaKnown RBP4.65□□□□□ -1.67
MECP2-225ENST00000638041 SYCNQ0VAF6 134 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 COMMD7Q86VX2 200 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 Q8N8P6 123 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 NRACQ8N912 160 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 C2orf48Q96LS8 159 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 GNB1LQ9BYB4 327 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 GEMIN7Q9H840 131 aaKnown RBP4.65□□□□□ -1.67
MECP2-225ENST00000638041 RPS10P5Q9NQ39 176 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 UBE2D4Q9Y2X8 147 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 PKD1P98161 4303 aa4.65□□□□□ -1.67
MECP2-225ENST00000638041 FAT2Q9NYQ8 4349 aa4.64□□□□□ -1.67
MECP2-225ENST00000638041 PRSS47A8MTI9 375 aa4.64□□□□□ -1.67
MECP2-225ENST00000638041 C9JQL5 133 aa4.64□□□□□ -1.67
MECP2-225ENST00000638041 NDUFA1O15239 70 aa4.64□□□□□ -1.67
MECP2-225ENST00000638041 SMR3BP02814 79 aaPredicted RBP4.64□□□□□ -1.67
MECP2-225ENST00000638041 XGP55808 180 aa4.64□□□□□ -1.67
MECP2-225ENST00000638041 RPL37AP61513 92 aaKnown RBP4.64□□□□□ -1.67
MECP2-225ENST00000638041 HERVK_113P63121 156 aa4.64□□□□□ -1.67
MECP2-225ENST00000638041 Q6ZSA8 131 aa4.64□□□□□ -1.67
MECP2-225ENST00000638041 FA2HQ7L5A8 372 aa4.64□□□□□ -1.67
MECP2-225ENST00000638041 LINC01561Q8N1V8 128 aa4.64□□□□□ -1.67
MECP2-225ENST00000638041 ALKBH7Q9BT30 221 aaPredicted RBP4.64□□□□□ -1.67
MECP2-225ENST00000638041 CKS1BP61024 79 aa4.63□□□□□ -1.67
MECP2-225ENST00000638041 FOXI1Q12951 378 aa4.63□□□□□ -1.67
MECP2-225ENST00000638041 RNF151Q2KHN1 245 aa4.63□□□□□ -1.67
MECP2-225ENST00000638041 MAJINQ3KP22 176 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 153 ms