RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 IGKCP01834 107 aa10.65□□□□□ -0.7
CLN6-219ENST00000637329 PKIAP61925 76 aa10.65□□□□□ -0.7
CLN6-219ENST00000637329 AMELXQ99217 191 aa10.65□□□□□ -0.7
CLN6-219ENST00000637329 CST9LQ9H4G1 147 aa10.65□□□□□ -0.7
CLN6-219ENST00000637329 MRPL35Q9NZE8 188 aaKnown RBP10.65□□□□□ -0.7
CLN6-219ENST00000637329 HSBP1L1C9JCN9 74 aa10.64□□□□□ -0.71
CLN6-219ENST00000637329 AMMECR1LQ6DCA0 310 aa10.64□□□□□ -0.71
CLN6-219ENST00000637329 DGAT2L7PQ6IED9 249 aa10.64□□□□□ -0.71
CLN6-219ENST00000637329 ATOH7Q8N100 152 aa10.64□□□□□ -0.71
CLN6-219ENST00000637329 TMEM101Q96IK0 257 aa10.64□□□□□ -0.71
CLN6-219ENST00000637329 PMCHL2Q9BQD1 86 aa10.64□□□□□ -0.71
CLN6-219ENST00000637329 CHCHD5Q9BSY4 110 aa10.64□□□□□ -0.71
CLN6-219ENST00000637329 VCX2Q9H322 139 aa10.64□□□□□ -0.71
CLN6-219ENST00000637329 LELP1Q5T871 98 aa10.63□□□□□ -0.71
CLN6-219ENST00000637329 Q6ZUT4 128 aa10.63□□□□□ -0.71
CLN6-219ENST00000637329 C15orf53Q8NAA6 179 aa10.63□□□□□ -0.71
CLN6-219ENST00000637329 OR5A1Q8NGJ0 315 aa10.63□□□□□ -0.71
CLN6-219ENST00000637329 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
CLN6-219ENST00000637329 C2orf88Q9BSF0 95 aa10.63□□□□□ -0.71
CLN6-219ENST00000637329 DNAH9Q9NYC9 4486 aa10.63□□□□□ -0.71
CLN6-219ENST00000637329 PAM16Q9Y3D7 125 aa10.62□□□□□ -0.71
CLN6-219ENST00000637329 COL7A1Q02388 2944 aa10.61□□□□□ -0.71
CLN6-219ENST00000637329 IGLV4-69A0A075B6H9 119 aa10.61□□□□□ -0.71
CLN6-219ENST00000637329 TSTD3H0UI37 97 aa10.61□□□□□ -0.71
CLN6-219ENST00000637329 SPATA45Q537H7 98 aa10.61□□□□□ -0.71
CLN6-219ENST00000637329 CEMP1Q6PRD7 247 aaPredicted RBP10.61□□□□□ -0.71
CLN6-219ENST00000637329 NFE4Q86UQ8 179 aa10.61□□□□□ -0.71
CLN6-219ENST00000637329 OPRPNQ99935 248 aaPredicted RBP10.61□□□□□ -0.71
CLN6-219ENST00000637329 A0A1B0GUV1 79 aa10.6□□□□□ -0.71
CLN6-219ENST00000637329 IGLC3P0DOY3 106 aa10.6□□□□□ -0.71
CLN6-219ENST00000637329 GAGE6Q13070 117 aa10.6□□□□□ -0.71
CLN6-219ENST00000637329 ZNF664Q8N3J9 261 aa10.6□□□□□ -0.71
CLN6-219ENST00000637329 CDC42SE2Q9NRR3 84 aa10.6□□□□□ -0.71
CLN6-219ENST00000637329 BIRC6Q9NR09 4857 aa10.58□□□□□ -0.72
CLN6-219ENST00000637329 hDV102S1A0JD36 115 aa10.58□□□□□ -0.72
CLN6-219ENST00000637329 FAM19A3Q7Z5A8 133 aa10.58□□□□□ -0.72
CLN6-219ENST00000637329 CHAC1Q9BUX1 264 aa10.58□□□□□ -0.72
CLN6-219ENST00000637329 TINCRA0A1B0GVN0 87 aa10.57□□□□□ -0.72
CLN6-219ENST00000637329 C11orf86A6NJI1 115 aa10.57□□□□□ -0.72
CLN6-219ENST00000637329 SEC11AP67812 179 aa10.57□□□□□ -0.72
CLN6-219ENST00000637329 MAJINQ3KP22 176 aa10.57□□□□□ -0.72
CLN6-219ENST00000637329 ZC2HC1BQ5TFG8 222 aa10.57□□□□□ -0.72
CLN6-219ENST00000637329 LYPD5Q6UWN5 251 aa10.57□□□□□ -0.72
CLN6-219ENST00000637329 TRAV8-6A0A0B4J262 113 aa10.56□□□□□ -0.72
CLN6-219ENST00000637329 UBE2D1P51668 147 aa10.56□□□□□ -0.72
CLN6-219ENST00000637329 RNASE13Q5GAN3 156 aaKnown RBP10.56□□□□□ -0.72
CLN6-219ENST00000637329 C3orf84H3BNL1 204 aa10.55□□□□□ -0.72
CLN6-219ENST00000637329 HERVK_113P61574 105 aa10.55□□□□□ -0.72
CLN6-219ENST00000637329 RBX1P62877 108 aa10.55□□□□□ -0.72
CLN6-219ENST00000637329 MPV17L2Q567V2 206 aa10.55□□□□□ -0.72
CLN6-219ENST00000637329 STAB2Q8WWQ8 2551 aa10.54□□□□□ -0.72
CLN6-219ENST00000637329 IGLV4-60A0A075B6I1 120 aa10.54□□□□□ -0.72
CLN6-219ENST00000637329 HERVK_113P63121 156 aa10.54□□□□□ -0.72
CLN6-219ENST00000637329 KRTAP17-1Q9BYP8 105 aa10.54□□□□□ -0.72
CLN6-219ENST00000637329 A0A0J9YXV3 536 aa10.53□□□□□ -0.72
CLN6-219ENST00000637329 TMEM262E9PQX1 116 aa10.53□□□□□ -0.72
CLN6-219ENST00000637329 ZNF22P17026 224 aaPredicted RBP10.53□□□□□ -0.72
CLN6-219ENST00000637329 ANKRD39Q53RE8 183 aa10.53□□□□□ -0.72
CLN6-219ENST00000637329 STPG4Q8N801 248 aa10.53□□□□□ -0.72
CLN6-219ENST00000637329 PRO1933Q9H354 126 aa10.53□□□□□ -0.72
CLN6-219ENST00000637329 IGLV5-45A0A087WSX0 123 aa10.52□□□□□ -0.73
CLN6-219ENST00000637329 CCL25O15444 150 aa10.52□□□□□ -0.73
CLN6-219ENST00000637329 TMEM170BQ5T4T1 132 aa10.52□□□□□ -0.73
CLN6-219ENST00000637329 GEMIN7Q9H840 131 aaKnown RBP10.52□□□□□ -0.73
CLN6-219ENST00000637329 UQCR10Q9UDW1 63 aa10.52□□□□□ -0.73
CLN6-219ENST00000637329 EPPK1P58107 5090 aaKnown RBP10.52□□□□□ -0.73
CLN6-219ENST00000637329 E9PLD3 99 aa10.51□□□□□ -0.73
CLN6-219ENST00000637329 TRAV13-1A0A0B4J241 112 aa10.5□□□□□ -0.73
CLN6-219ENST00000637329 NUPR2A6NF83 97 aa10.5□□□□□ -0.73
CLN6-219ENST00000637329 H3BRM9 83 aa10.5□□□□□ -0.73
CLN6-219ENST00000637329 COX8AP10176 69 aa10.5□□□□□ -0.73
CLN6-219ENST00000637329 ESRGQ1W209 222 aa10.5□□□□□ -0.73
CLN6-219ENST00000637329 LINC00242Q5T6M2 205 aa10.5□□□□□ -0.73
CLN6-219ENST00000637329 MIEN1Q9BRT3 115 aa10.5□□□□□ -0.73
CLN6-219ENST00000637329 TMEM223A0PJW6 202 aa10.49□□□□□ -0.73
CLN6-219ENST00000637329 IGLL5B9A064 214 aa10.49□□□□□ -0.73
CLN6-219ENST00000637329 DLEU1O43261 78 aa10.49□□□□□ -0.73
CLN6-219ENST00000637329 SLC25A34Q6PIV7 304 aa10.49□□□□□ -0.73
CLN6-219ENST00000637329 LINC00469Q8N7U9 141 aa10.49□□□□□ -0.73
CLN6-219ENST00000637329 MRPS16Q9Y3D3 137 aaKnown RBP10.49□□□□□ -0.73
CLN6-219ENST00000637329 DDTP30046 118 aa10.48□□□□□ -0.73
CLN6-219ENST00000637329 NMUP48645 174 aa10.48□□□□□ -0.73
CLN6-219ENST00000637329 TCTAP57738 103 aa10.48□□□□□ -0.73
CLN6-219ENST00000637329 WFDC10BQ8IUB3 73 aa10.48□□□□□ -0.73
CLN6-219ENST00000637329 LINC00959A0A1B0GUT2 108 aa10.47□□□□□ -0.73
CLN6-219ENST00000637329 PCP4L1A6NKN8 68 aa10.47□□□□□ -0.73
CLN6-219ENST00000637329 ANGP03950 147 aaKnown RBP10.47□□□□□ -0.73
CLN6-219ENST00000637329 CCL18P55774 89 aa10.47□□□□□ -0.73
CLN6-219ENST00000637329 LINC01556Q5JQF7 62 aa10.47□□□□□ -0.73
CLN6-219ENST00000637329 C14orf144Q96I85 54 aa10.47□□□□□ -0.73
CLN6-219ENST00000637329 IGKV2D-26A0A0A0MRZ7 120 aa10.46□□□□□ -0.73
CLN6-219ENST00000637329 REG3AQ06141 175 aa10.46□□□□□ -0.73
CLN6-219ENST00000637329 SS18Q15532 418 aa10.46□□□□□ -0.73
CLN6-219ENST00000637329 BOD1L2Q8IYS8 172 aa10.46□□□□□ -0.73
CLN6-219ENST00000637329 UPK3BQ9BT76 320 aa10.46□□□□□ -0.73
CLN6-219ENST00000637329 PRR34Q9NV39 138 aa10.46□□□□□ -0.73
CLN6-219ENST00000637329 KLK5Q9Y337 293 aaPredicted RBP10.46□□□□□ -0.73
CLN6-219ENST00000637329 DYNC2H1Q8NCM8 4307 aaKnown RBP10.46□□□□□ -0.74
CLN6-219ENST00000637329 LEPROTO15243 131 aa10.45□□□□□ -0.74
CLN6-219ENST00000637329 LINC00269Q8N2A0 174 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms