RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 LRCOL1A6NCL2 159 aa10.28□□□□□ -0.76
CLN6-211ENST00000635754 OR5A1Q8NGJ0 315 aa10.28□□□□□ -0.76
CLN6-211ENST00000635754 DGAT2L7PQ6IED9 249 aa10.27□□□□□ -0.77
CLN6-211ENST00000635754 MRPL18Q9H0U6 180 aaKnown RBP10.27□□□□□ -0.77
CLN6-211ENST00000635754 PKD1P98161 4303 aa10.26□□□□□ -0.77
CLN6-211ENST00000635754 IGLV10-54A0A075B6I4 117 aa10.26□□□□□ -0.77
CLN6-211ENST00000635754 KRTAP10-2P60368 255 aa10.26□□□□□ -0.77
CLN6-211ENST00000635754 MAPKAPK5-AS1Q8N8E1 139 aa10.26□□□□□ -0.77
CLN6-211ENST00000635754 Q8N8P6 123 aa10.26□□□□□ -0.77
CLN6-211ENST00000635754 IGKV3OR2-268A0A0C4DH90 116 aa10.25□□□□□ -0.77
CLN6-211ENST00000635754 C16orf90A8MZG2 172 aa10.25□□□□□ -0.77
CLN6-211ENST00000635754 LECT2O14960 151 aa10.25□□□□□ -0.77
CLN6-211ENST00000635754 FABP9Q0Z7S8 132 aa10.25□□□□□ -0.77
CLN6-211ENST00000635754 BAALCQ8WXS3 180 aa10.25□□□□□ -0.77
CLN6-211ENST00000635754 NXT2Q9NPJ8 142 aaKnown RBP10.25□□□□□ -0.77
CLN6-211ENST00000635754 UBE2D4Q9Y2X8 147 aa10.25□□□□□ -0.77
CLN6-211ENST00000635754 CSDC2Q9Y534 153 aaKnown RBP10.25□□□□□ -0.77
CLN6-211ENST00000635754 CDPF1Q6NVV7 123 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 Q8N814 137 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 TIMM21Q9BVV7 248 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 SMCO4Q9NRQ5 59 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 CDC42SE2Q9NRR3 84 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 K7EMI3 77 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 RPL39P62891 51 aaKnown RBP10.24□□□□□ -0.77
CLN6-211ENST00000635754 WFDC2Q14508 124 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 CBLN2Q8IUK8 224 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 ZNF664Q8N3J9 261 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 ALKBH7Q9BT30 221 aaPredicted RBP10.24□□□□□ -0.77
CLN6-211ENST00000635754 TRAPPC1Q9Y5R8 145 aa10.24□□□□□ -0.77
CLN6-211ENST00000635754 IFI27P40305 119 aaPredicted RBP10.23□□□□□ -0.77
CLN6-211ENST00000635754 ORMDL2Q53FV1 153 aa10.23□□□□□ -0.77
CLN6-211ENST00000635754 SPANXA1Q9NS26 97 aa10.23□□□□□ -0.77
CLN6-211ENST00000635754 KRTAP26-1Q6PEX3 210 aa10.22□□□□□ -0.77
CLN6-211ENST00000635754 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
CLN6-211ENST00000635754 YPEL4Q96NS1 127 aa10.22□□□□□ -0.77
CLN6-211ENST00000635754 C14orf177Q52M58 125 aa10.21□□□□□ -0.78
CLN6-211ENST00000635754 PRSS3P2Q8NHM4 247 aa10.21□□□□□ -0.78
CLN6-211ENST00000635754 CHCHD10Q8WYQ3 142 aaPredicted RBP10.21□□□□□ -0.78
CLN6-211ENST00000635754 LINC00959A0A1B0GUT2 108 aa10.2□□□□□ -0.78
CLN6-211ENST00000635754 FUSP35637 526 aaKnown RBP eCLIP10.2□□□□□ -0.78
CLN6-211ENST00000635754 Q6ZUT4 128 aa10.2□□□□□ -0.78
CLN6-211ENST00000635754 PKHD1P08F94 4074 aa10.2□□□□□ -0.78
CLN6-211ENST00000635754 IGLV5-52A0A0A0MRZ9 124 aa10.19□□□□□ -0.78
CLN6-211ENST00000635754 GAGE12HA6NDE8 117 aa10.19□□□□□ -0.78
CLN6-211ENST00000635754 USP17L23D6RBM5 183 aa10.19□□□□□ -0.78
CLN6-211ENST00000635754 SS18Q15532 418 aa10.19□□□□□ -0.78
CLN6-211ENST00000635754 RNASE13Q5GAN3 156 aaKnown RBP10.19□□□□□ -0.78
CLN6-211ENST00000635754 CYSLTR1Q9Y271 337 aa10.19□□□□□ -0.78
CLN6-211ENST00000635754 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.18□□□□□ -0.78
CLN6-211ENST00000635754 G0S2P27469 103 aa10.18□□□□□ -0.78
CLN6-211ENST00000635754 MRPS36P82909 103 aaKnown RBP10.18□□□□□ -0.78
CLN6-211ENST00000635754 C2orf66Q6UXQ4 117 aa10.18□□□□□ -0.78
CLN6-211ENST00000635754 PYGO1Q9Y3Y4 419 aa10.18□□□□□ -0.78
CLN6-211ENST00000635754 CCL25O15444 150 aa10.17□□□□□ -0.78
CLN6-211ENST00000635754 XCL1P47992 114 aa10.16□□□□□ -0.78
CLN6-211ENST00000635754 FA2HQ7L5A8 372 aa10.16□□□□□ -0.78
CLN6-211ENST00000635754 OPRPNQ99935 248 aaPredicted RBP10.16□□□□□ -0.78
CLN6-211ENST00000635754 TRAV13-1A0A0B4J241 112 aa10.16□□□□□ -0.78
CLN6-211ENST00000635754 C1orf196B1AJZ1 125 aa10.16□□□□□ -0.78
CLN6-211ENST00000635754 C18orf32Q8TCD1 76 aa10.16□□□□□ -0.78
CLN6-211ENST00000635754 DNAH11Q96DT5 4516 aa10.15□□□□□ -0.79
CLN6-211ENST00000635754 LINC01546A6NGU7 62 aa10.15□□□□□ -0.79
CLN6-211ENST00000635754 GCSHP23434 173 aa10.15□□□□□ -0.79
CLN6-211ENST00000635754 FOXI1Q12951 378 aa10.15□□□□□ -0.79
CLN6-211ENST00000635754 FAM104AQ969W3 186 aa10.15□□□□□ -0.79
CLN6-211ENST00000635754 TMEM141Q96I45 108 aa10.15□□□□□ -0.79
CLN6-211ENST00000635754 BIRC6Q9NR09 4857 aa10.14□□□□□ -0.79
CLN6-211ENST00000635754 IGLV4-3A0A075B6K6 122 aa10.14□□□□□ -0.79
CLN6-211ENST00000635754 A6NJY4 79 aa10.14□□□□□ -0.79
CLN6-211ENST00000635754 IFITM10A6NMD0 228 aa10.14□□□□□ -0.79
CLN6-211ENST00000635754 CFAP161Q6P656 301 aa10.14□□□□□ -0.79
CLN6-211ENST00000635754 CD164L2Q6UWJ8 174 aa10.14□□□□□ -0.79
CLN6-211ENST00000635754 PRSS1P07477 247 aa10.13□□□□□ -0.79
CLN6-211ENST00000635754 NPSP0C0P6 89 aa10.13□□□□□ -0.79
CLN6-211ENST00000635754 Q6ZN92 141 aa10.13□□□□□ -0.79
CLN6-211ENST00000635754 TOMM6Q96B49 74 aa10.13□□□□□ -0.79
CLN6-211ENST00000635754 hDV102S1A0JD36 115 aa10.12□□□□□ -0.79
CLN6-211ENST00000635754 LINC01549A6NIU2 74 aa10.12□□□□□ -0.79
CLN6-211ENST00000635754 TEX43Q6ZNM6 134 aa10.12□□□□□ -0.79
CLN6-211ENST00000635754 AP5S1Q9NUS5 200 aa10.12□□□□□ -0.79
CLN6-211ENST00000635754 IGIPA6NJ69 53 aa10.11□□□□□ -0.79
CLN6-211ENST00000635754 LINC00614P0C842 121 aa10.11□□□□□ -0.79
CLN6-211ENST00000635754 PAPPA-AS1Q5QFB9 102 aa10.11□□□□□ -0.79
CLN6-211ENST00000635754 C15orf56Q8N910 161 aa10.11□□□□□ -0.79
CLN6-211ENST00000635754 TIMM17AQ99595 171 aa10.11□□□□□ -0.79
CLN6-211ENST00000635754 C2orf88Q9BSF0 95 aa10.11□□□□□ -0.79
CLN6-211ENST00000635754 KRTAP10-1P60331 282 aa10.1□□□□□ -0.79
CLN6-211ENST00000635754 RAB5BP61020 215 aa10.1□□□□□ -0.79
CLN6-211ENST00000635754 SCGB3A1Q96QR1 104 aa10.1□□□□□ -0.79
CLN6-211ENST00000635754 VCX2Q9H322 139 aa10.1□□□□□ -0.79
CLN6-211ENST00000635754 COX7A2LO14548 114 aa10.09□□□□□ -0.79
CLN6-211ENST00000635754 TRGC2P03986 189 aa10.09□□□□□ -0.79
CLN6-211ENST00000635754 ERASQ7Z444 233 aa10.09□□□□□ -0.79
CLN6-211ENST00000635754 IGHV1-58A0A0C4DH39 117 aa10.08□□□□□ -0.8
CLN6-211ENST00000635754 COLCA2A8K830 154 aa10.08□□□□□ -0.8
CLN6-211ENST00000635754 SCO1O75880 301 aa10.08□□□□□ -0.8
CLN6-211ENST00000635754 CDK2AP2O75956 126 aa10.08□□□□□ -0.8
CLN6-211ENST00000635754 MALP21145 153 aa10.08□□□□□ -0.8
CLN6-211ENST00000635754 HIGD2BQ4VC39 106 aa10.08□□□□□ -0.8
CLN6-211ENST00000635754 URB1-AS1Q96HZ7 61 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms