RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 C20orf203Q8NBC4 194 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 C16orf74Q96GX8 76 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 MRPL16Q9NX20 251 aaKnown RBP5.16□□□□□ -1.58
BRCA1-230ENST00000634433 IGHV3-73A0A0B4J1V6 119 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 HERVK_113P61574 105 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 SEC11AP67812 179 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 HSD52Q0P140 79 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 DAZ2Q13117 558 aaKnown RBP5.16□□□□□ -1.58
BRCA1-230ENST00000634433 BVES-AS1Q5T3Y7 98 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 HRCT1Q6UXD1 115 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 C2orf91Q6ZV80 131 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 GTSF1LQ9H1H1 148 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 HIGD1BQ9P298 99 aa5.16□□□□□ -1.58
BRCA1-230ENST00000634433 TRGV1A0A0A0MS02 117 aa5.15□□□□□ -1.58
BRCA1-230ENST00000634433 PRM2P04554 102 aa5.15□□□□□ -1.58
BRCA1-230ENST00000634433 JMJD1CQ15652 2540 aa5.15□□□□□ -1.58
BRCA1-230ENST00000634433 KRTAP24-1Q3LI83 254 aa5.15□□□□□ -1.58
BRCA1-230ENST00000634433 PYGO1Q9Y3Y4 419 aa5.15□□□□□ -1.58
BRCA1-230ENST00000634433 TRAV4A0A0B4J268 109 aa5.15□□□□□ -1.59
BRCA1-230ENST00000634433 RPL39P62891 51 aaKnown RBP5.15□□□□□ -1.59
BRCA1-230ENST00000634433 RRN3P1Q2M238 152 aa5.15□□□□□ -1.59
BRCA1-230ENST00000634433 PCP2Q8IVA1 136 aa5.15□□□□□ -1.59
BRCA1-230ENST00000634433 CARD19Q96LW7 228 aa5.15□□□□□ -1.59
BRCA1-230ENST00000634433 ANK2Q01484 3957 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 TRBV10-1A0A0K0K1A3 114 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 EMP1P54849 157 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 SPANXB1Q9NS25 103 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-230ENST00000634433 A6NDN8 102 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 E9PLD3 99 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 GIG44P09565 113 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-230ENST00000634433 P0DMU3 169 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 FAM231AP0DMU4 169 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 FAM231CP0DMU5 169 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE13Q4V321 117 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 ORAOV1Q8WV07 137 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 ERG28Q9UKR5 140 aa5.14□□□□□ -1.59
BRCA1-230ENST00000634433 IGKV2D-26A0A0A0MRZ7 120 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 RPL36AP83881 106 aaKnown RBP5.13□□□□□ -1.59
BRCA1-230ENST00000634433 RPL36ALQ969Q0 106 aaKnown RBP5.13□□□□□ -1.59
BRCA1-230ENST00000634433 CUBNO60494 3623 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 TRAV8-6A0A0B4J262 113 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 C11orf86A6NJI1 115 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE2BQ13066 116 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE2EQ4V326 116 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE2AQ6NT46 116 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 Q6ZSN1 163 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 CSNK1G2-AS1Q8NCQ2 148 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 TMEM101Q96IK0 257 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 WFDC10AQ9H1F0 79 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 NOP10Q9NPE3 64 aaKnown RBP5.13□□□□□ -1.59
BRCA1-230ENST00000634433 SPANXA1Q9NS26 97 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE2DQ9UEU5 116 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 TP73-AS1Q9UF72 201 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 COX11Q9Y6N1 276 aa5.13□□□□□ -1.59
BRCA1-230ENST00000634433 MYMXA0A1B0GTQ4 84 aa5.12□□□□□ -1.59
BRCA1-230ENST00000634433 NFE4Q86UQ8 179 aa5.12□□□□□ -1.59
BRCA1-230ENST00000634433 IGLV4-69A0A075B6H9 119 aa5.12□□□□□ -1.59
BRCA1-230ENST00000634433 IGLV4-3A0A075B6K6 122 aa5.12□□□□□ -1.59
BRCA1-230ENST00000634433 TRBV7-3A0A075B6L6 115 aa5.12□□□□□ -1.59
BRCA1-230ENST00000634433 TRBV25-1A0A075B6N4 114 aa5.12□□□□□ -1.59
BRCA1-230ENST00000634433 K7EQD1 137 aa5.12□□□□□ -1.59
BRCA1-230ENST00000634433 Q6ZTI0 123 aa5.12□□□□□ -1.59
BRCA1-230ENST00000634433 DAZ4Q86SG3 579 aaKnown RBP5.12□□□□□ -1.59
BRCA1-230ENST00000634433 DEFB104AQ8WTQ1 72 aa5.12□□□□□ -1.59
BRCA1-230ENST00000634433 DAZ3Q9NR90 486 aaKnown RBP5.12□□□□□ -1.59
BRCA1-230ENST00000634433 STAB1Q9NY15 2570 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 TRGV2A0A075B6R0 118 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-230ENST00000634433 MAPKAPK5-AS1Q8N8E1 139 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 PRADC1Q9BSG0 188 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 CHAC1Q9BUX1 264 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 TMEM170BQ5T4T1 132 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 ZNRF2Q8NHG8 242 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 AMELXQ99217 191 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 CHCHD7Q9BUK0 85 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 TIMM21Q9BVV7 248 aa5.11□□□□□ -1.59
BRCA1-230ENST00000634433 ATRQ13535 2644 aa5.1□□□□□ -1.59
BRCA1-230ENST00000634433 TRBV6-4A0A1B0GX49 114 aa5.1□□□□□ -1.59
BRCA1-230ENST00000634433 H3BRM9 83 aa5.1□□□□□ -1.59
BRCA1-230ENST00000634433 TAX1BP3O14907 124 aa5.1□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE12BA1L429 117 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 PLAC8L1A1L4L8 177 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE7O76087 117 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE12FP0CL80 117 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE12GP0CL81 117 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 GAGE12IP0CL82 117 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 MRPS36P82909 103 aaKnown RBP5.09□□□□□ -1.59
BRCA1-230ENST00000634433 WFDC9Q8NEX5 89 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 PHLDA1Q8WV24 401 aaPredicted RBP5.09□□□□□ -1.59
BRCA1-230ENST00000634433 NACAE9PAV3 2078 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 TRGV4A0A0C4DH28 118 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 A0A0U1RQV1 116 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 ZNF815PA8K554 130 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 MRPL55Q7Z7F7 128 aaKnown RBP5.09□□□□□ -1.59
BRCA1-230ENST00000634433 CEND1Q8N111 149 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 PLEKHB2Q96CS7 222 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 HIST1H4GQ99525 98 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 TTTY13Q9BZ97 58 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 UBE2D4Q9Y2X8 147 aa5.09□□□□□ -1.59
BRCA1-230ENST00000634433 FBN1P35555 2871 aaKnown RBP5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms