RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 TMEM97Q5BJF2 176 aa12.66□□□□□ -0.38
PNKP-224ENST00000631020 FA2HQ7L5A8 372 aa12.66□□□□□ -0.38
PNKP-224ENST00000631020 LAMTOR2Q9Y2Q5 125 aa12.66□□□□□ -0.38
PNKP-224ENST00000631020 PRSS47A8MTI9 375 aa12.65□□□□□ -0.38
PNKP-224ENST00000631020 RPL32P62910 135 aaKnown RBP12.65□□□□□ -0.38
PNKP-224ENST00000631020 TTC32Q5I0X7 151 aa12.65□□□□□ -0.38
PNKP-224ENST00000631020 C6orf223Q8N319 242 aa12.65□□□□□ -0.38
PNKP-224ENST00000631020 Q8N3U1 123 aa12.65□□□□□ -0.38
PNKP-224ENST00000631020 IGHV1-24A0A0C4DH33 117 aa12.64□□□□□ -0.39
PNKP-224ENST00000631020 SMIM2Q9BVW6 85 aa12.64□□□□□ -0.39
PNKP-224ENST00000631020 MAP1LC3CQ9BXW4 147 aa12.64□□□□□ -0.39
PNKP-224ENST00000631020 TRBV25-1A0A075B6N4 114 aa12.63□□□□□ -0.39
PNKP-224ENST00000631020 TRAV9-2A0A087WT02 112 aa12.63□□□□□ -0.39
PNKP-224ENST00000631020 LOC389332A0A1B0GUA5 103 aa12.63□□□□□ -0.39
PNKP-224ENST00000631020 DNAH10OSP0CZ25 163 aa12.63□□□□□ -0.39
PNKP-224ENST00000631020 PRSS3P2Q8NHM4 247 aa12.63□□□□□ -0.39
PNKP-224ENST00000631020 AP5S1Q9NUS5 200 aa12.63□□□□□ -0.39
PNKP-224ENST00000631020 PET117Q6UWS5 81 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 URB1-AS1Q96HZ7 61 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 CHCHD5Q9BSY4 110 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 KIAA1109Q2LD37 5005 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 A0A1B0GV90 55 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 LINC00469Q8N7U9 141 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 CHCHD7Q9BUK0 85 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 SNHG12Q9BXW3 62 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 KRTAP1-5Q9BYS1 174 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 MAP1LC3AQ9H492 121 aa12.62□□□□□ -0.39
PNKP-224ENST00000631020 DNAH11Q96DT5 4516 aa12.61□□□□□ -0.39
PNKP-224ENST00000631020 HSBP1L1C9JCN9 74 aa12.61□□□□□ -0.39
PNKP-224ENST00000631020 EREGO14944 169 aa12.61□□□□□ -0.39
PNKP-224ENST00000631020 LINC01556Q5JQF7 62 aa12.61□□□□□ -0.39
PNKP-224ENST00000631020 TMEM243Q9BU79 118 aa12.61□□□□□ -0.39
PNKP-224ENST00000631020 SYS1-DBNDD2H3BUS1 97 aa12.6□□□□□ -0.39
PNKP-224ENST00000631020 IGHV3-30P01768 117 aa12.6□□□□□ -0.39
PNKP-224ENST00000631020 IGHV3-33P01772 117 aa12.6□□□□□ -0.39
PNKP-224ENST00000631020 IGHV3-30-3P0DP02 117 aa12.6□□□□□ -0.39
PNKP-224ENST00000631020 IGHV3-30-5P0DP03 117 aa12.6□□□□□ -0.39
PNKP-224ENST00000631020 HNRNPA3P51991 378 aaKnown RBP12.6□□□□□ -0.39
PNKP-224ENST00000631020 GAGE6Q13070 117 aa12.6□□□□□ -0.39
PNKP-224ENST00000631020 KIR2DL4Q99706 377 aa12.6□□□□□ -0.39
PNKP-224ENST00000631020 TCAPO15273 167 aa12.59□□□□□ -0.39
PNKP-224ENST00000631020 IGLC3P0DOY3 106 aa12.59□□□□□ -0.39
PNKP-224ENST00000631020 FCER1GP30273 86 aa12.59□□□□□ -0.39
PNKP-224ENST00000631020 Q8N8P6 123 aa12.59□□□□□ -0.39
PNKP-224ENST00000631020 TMEM262E9PQX1 116 aa12.58□□□□□ -0.4
PNKP-224ENST00000631020 IFI27P40305 119 aaPredicted RBP12.58□□□□□ -0.4
PNKP-224ENST00000631020 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.57□□□□□ -0.4
PNKP-224ENST00000631020 IGKV2-29A2NJV5 120 aaPredicted RBP12.57□□□□□ -0.4
PNKP-224ENST00000631020 TNP2Q05952 138 aa12.57□□□□□ -0.4
PNKP-224ENST00000631020 MPV17L2Q567V2 206 aa12.57□□□□□ -0.4
PNKP-224ENST00000631020 Q6ZN92 141 aa12.57□□□□□ -0.4
PNKP-224ENST00000631020 DYNC1H1Q14204 4646 aaKnown RBP12.56□□□□□ -0.4
PNKP-224ENST00000631020 A0A087WX48 190 aa12.56□□□□□ -0.4
PNKP-224ENST00000631020 NXT2Q9NPJ8 142 aaKnown RBP12.56□□□□□ -0.4
PNKP-224ENST00000631020 RBX1P62877 108 aa12.55□□□□□ -0.4
PNKP-224ENST00000631020 UBE2L6O14933 153 aa12.54□□□□□ -0.4
PNKP-224ENST00000631020 COL5A1-AS1Q5SY13 56 aa12.54□□□□□ -0.4
PNKP-224ENST00000631020 SPATA12Q7Z6I5 190 aa12.54□□□□□ -0.4
PNKP-224ENST00000631020 ATOH7Q8N100 152 aa12.54□□□□□ -0.4
PNKP-224ENST00000631020 C20orf203Q8NBC4 194 aa12.54□□□□□ -0.4
PNKP-224ENST00000631020 IGLV4-60A0A075B6I1 120 aa12.53□□□□□ -0.4
PNKP-224ENST00000631020 H7C423 109 aa12.53□□□□□ -0.4
PNKP-224ENST00000631020 K7EP13 123 aa12.53□□□□□ -0.4
PNKP-224ENST00000631020 A0A1B0GUV1 79 aa12.52□□□□□ -0.4
PNKP-224ENST00000631020 FGF6P10767 208 aa12.52□□□□□ -0.4
PNKP-224ENST00000631020 KLK12Q9UKR0 248 aa12.52□□□□□ -0.4
PNKP-224ENST00000631020 LINC01546A6NGU7 62 aa12.52□□□□□ -0.41
PNKP-224ENST00000631020 IBA57-AS1B1ANH7 110 aa12.52□□□□□ -0.41
PNKP-224ENST00000631020 HBDP02042 147 aa12.52□□□□□ -0.41
PNKP-224ENST00000631020 RPL39P62891 51 aaKnown RBP12.52□□□□□ -0.41
PNKP-224ENST00000631020 LINC01545Q5VT33 79 aa12.52□□□□□ -0.41
PNKP-224ENST00000631020 LAGE3Q14657 143 aa12.51□□□□□ -0.41
PNKP-224ENST00000631020 C10orf126Q8N4M7 172 aa12.51□□□□□ -0.41
PNKP-224ENST00000631020 K7EMI3 77 aa12.5□□□□□ -0.41
PNKP-224ENST00000631020 ANGP03950 147 aaKnown RBP12.5□□□□□ -0.41
PNKP-224ENST00000631020 BATFQ16520 125 aa12.5□□□□□ -0.41
PNKP-224ENST00000631020 PMCHL2Q9BQD1 86 aa12.5□□□□□ -0.41
PNKP-224ENST00000631020 AMMECR1LQ6DCA0 310 aa12.49□□□□□ -0.41
PNKP-224ENST00000631020 UBE2D4Q9Y2X8 147 aa12.49□□□□□ -0.41
PNKP-224ENST00000631020 C16orf90A8MZG2 172 aa12.48□□□□□ -0.41
PNKP-224ENST00000631020 ORMDL2Q53FV1 153 aa12.48□□□□□ -0.41
PNKP-224ENST00000631020 ENHOQ6UWT2 76 aa12.48□□□□□ -0.41
PNKP-224ENST00000631020 LINC00173Q6ZV60 143 aa12.48□□□□□ -0.41
PNKP-224ENST00000631020 ZNF25P17030 456 aaPredicted RBP12.47□□□□□ -0.41
PNKP-224ENST00000631020 SLC25A34Q6PIV7 304 aa12.47□□□□□ -0.41
PNKP-224ENST00000631020 LINC00269Q8N2A0 174 aa12.47□□□□□ -0.41
PNKP-224ENST00000631020 H0Y8G0 127 aa12.47□□□□□ -0.41
PNKP-224ENST00000631020 MAJINQ3KP22 176 aa12.47□□□□□ -0.41
PNKP-224ENST00000631020 Q6ZRN7 208 aaPredicted RBP12.47□□□□□ -0.41
PNKP-224ENST00000631020 FAM104AQ969W3 186 aa12.47□□□□□ -0.41
PNKP-224ENST00000631020 UBE2WQ96B02 151 aa12.47□□□□□ -0.41
PNKP-224ENST00000631020 KRTAP17-1Q9BYP8 105 aa12.47□□□□□ -0.41
PNKP-224ENST00000631020 PRR34Q9NV39 138 aa12.47□□□□□ -0.41
PNKP-224ENST00000631020 C2orf66Q6UXQ4 117 aa12.46□□□□□ -0.42
PNKP-224ENST00000631020 TIMM21Q9BVV7 248 aa12.46□□□□□ -0.42
PNKP-224ENST00000631020 Q9HAA7 133 aa12.46□□□□□ -0.42
PNKP-224ENST00000631020 CSDC2Q9Y534 153 aaKnown RBP12.46□□□□□ -0.42
PNKP-224ENST00000631020 CDK2AP2O75956 126 aa12.45□□□□□ -0.42
PNKP-224ENST00000631020 CLPSL2Q6UWE3 100 aa12.45□□□□□ -0.42
PNKP-224ENST00000631020 OR5A1Q8NGJ0 315 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms