RNA–Protein interactions for RNA: ENST00000629293.1

LINC00550-201, long intergenic non-protein coding RNA 550, humanhuman

TSL 1 (best) BASIC

Gene LINC00550, Length 3,434 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00550-201ENST00000629293 LINC00315P59091 139 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 KRTAP4-5Q9BYR2 181 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 A0A087WX48 190 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 TRAV12-1A0A0B4J245 112 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 TRAV8-6A0A0B4J262 113 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 PAX4O43316 350 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 RNASE4P34096 147 aaKnown RBP3.42□□□□□ -1.86
LINC00550-201ENST00000629293 RPL32P62910 135 aaKnown RBP3.42□□□□□ -1.86
LINC00550-201ENST00000629293 LINC00336Q6ZUF6 198 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 TOMM6Q96B49 74 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 NACAE9PAV3 2078 aa3.42□□□□□ -1.86
LINC00550-201ENST00000629293 IGLV5-52A0A0A0MRZ9 124 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 C7orf71A4D174 169 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 H3BRM9 83 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 RTL8CO15255 209 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 GAGE7O76087 117 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 GAGE12FP0CL80 117 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 GAGE12GP0CL81 117 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 GAGE12IP0CL82 117 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 P0DMU3 169 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 FAM231AP0DMU4 169 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 FAM231CP0DMU5 169 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 GAGE4Q13068 117 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 AP1S3Q96PC3 154 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 DNAH11Q96DT5 4516 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 GNRH2O43555 120 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 PRSS1P07477 247 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 MIFP14174 115 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 NMUP48645 174 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 VAMP3Q15836 100 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 C12orf74Q32Q52 190 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 ORMDL2Q53FV1 153 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 MAPKAPK5-AS1Q8N8E1 139 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 RPL39LQ96EH5 51 aaKnown RBP3.41□□□□□ -1.86
LINC00550-201ENST00000629293 MRPL35Q9NZE8 188 aaKnown RBP3.41□□□□□ -1.86
LINC00550-201ENST00000629293 PHLDA3Q9Y5J5 127 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 FAT2Q9NYQ8 4349 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 K7EQG2 157 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 GIG44P09565 113 aaPredicted RBP3.41□□□□□ -1.86
LINC00550-201ENST00000629293 S100A4P26447 101 aaKnown RBP3.41□□□□□ -1.86
LINC00550-201ENST00000629293 PLNP26678 52 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 ID1P41134 155 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 TCTAP57738 103 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 UFSP1Q6NVU6 142 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 ERASQ7Z444 233 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 C14orf178Q8N769 122 aaPredicted RBP3.41□□□□□ -1.86
LINC00550-201ENST00000629293 C9orf85Q96MD7 179 aa3.41□□□□□ -1.86
LINC00550-201ENST00000629293 A6NDN8 102 aa3.4□□□□□ -1.86
LINC00550-201ENST00000629293 F8VRH5 84 aa3.4□□□□□ -1.86
LINC00550-201ENST00000629293 PPP1R17O96001 155 aa3.4□□□□□ -1.86
LINC00550-201ENST00000629293 ZC2HC1BQ5TFG8 222 aa3.4□□□□□ -1.86
LINC00550-201ENST00000629293 AMMECR1LQ6DCA0 310 aa3.4□□□□□ -1.86
LINC00550-201ENST00000629293 TRPT1Q86TN4 253 aaKnown RBP3.4□□□□□ -1.86
LINC00550-201ENST00000629293 A0A0J9YX75 114 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 C16orf90A8MZG2 172 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.4□□□□□ -1.87
LINC00550-201ENST00000629293 RPL24P83731 157 aaKnown RBP3.4□□□□□ -1.87
LINC00550-201ENST00000629293 FAM159AQ6UWV7 190 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 OR4C5Q8NGB2 326 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 CHAC1Q9BUX1 264 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 TTTY13Q9BZ97 58 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 TRBV25-1A0A075B6N4 114 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 IGHV3-16A0A0C4DH30 117 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 H7C1H1 209 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 SNRPD3P62318 126 aaKnown RBP3.4□□□□□ -1.87
LINC00550-201ENST00000629293 RBX1P62877 108 aa3.4□□□□□ -1.87
LINC00550-201ENST00000629293 TRBV6-5A0A0K0K1A5 114 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 MGPP08493 103 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 SPART-AS1P0CW21 52 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 HTN1P15515 57 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 POLR2KP53803 58 aaKnown RBP3.39□□□□□ -1.87
LINC00550-201ENST00000629293 FXYD2P54710 66 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 C1orf134Q5TEV5 83 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 FAM222AQ5U5X8 452 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 PRR26Q8N8Z3 221 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 BAALCQ8WXS3 180 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 HERC1Q15751 4861 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 A0A1B0GVY2 172 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 A8MTW9 85 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 DEFB130BP0DP73 79 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 DEFB130AP0DP74 79 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 TAL2Q16559 108 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 MORN3Q6PF18 240 aaPredicted RBP3.39□□□□□ -1.87
LINC00550-201ENST00000629293 AMTNQ6UX39 209 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 C2orf66Q6UXQ4 117 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 SCGB3A1Q96QR1 104 aa3.39□□□□□ -1.87
LINC00550-201ENST00000629293 K7EP34 96 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 TSHBP01222 138 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 C1QTNF4Q9BXJ3 329 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 CHTOPQ9Y3Y2 248 aaKnown RBP3.38□□□□□ -1.87
LINC00550-201ENST00000629293 DYNC1H1Q14204 4646 aaKnown RBP3.38□□□□□ -1.87
LINC00550-201ENST00000629293 TRAV12-3A0A0B4J271 114 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 TRBV27A0A0K0K1C4 114 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 LINC01549A6NIU2 74 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 IGIPA6NJ69 53 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 PRM2P04554 102 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 CRYGDP07320 174 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 DAD1P61803 113 aa3.38□□□□□ -1.87
LINC00550-201ENST00000629293 CEND1Q8N111 149 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms