RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 ANK3Q12955 4377 aaKnown RBP8.97□□□□□ -0.97
SYNGAP1-207ENST00000628646 IGHV3-38A0A0C4DH36 116 aa8.97□□□□□ -0.97
SYNGAP1-207ENST00000628646 H3BUT2 72 aa8.97□□□□□ -0.97
SYNGAP1-207ENST00000628646 GYPEP15421 78 aa8.97□□□□□ -0.97
SYNGAP1-207ENST00000628646 K7ERU9 68 aa8.97□□□□□ -0.97
SYNGAP1-207ENST00000628646 SPANXA1Q9NS26 97 aa8.97□□□□□ -0.97
SYNGAP1-207ENST00000628646 KLK5Q9Y337 293 aaPredicted RBP8.97□□□□□ -0.97
SYNGAP1-207ENST00000628646 NHLRC4P0CG21 123 aaPredicted RBP8.96□□□□□ -0.97
SYNGAP1-207ENST00000628646 BAALCQ8WXS3 180 aa8.96□□□□□ -0.97
SYNGAP1-207ENST00000628646 PRSS2P07478 247 aa8.96□□□□□ -0.98
SYNGAP1-207ENST00000628646 OR5A1Q8NGJ0 315 aa8.96□□□□□ -0.98
SYNGAP1-207ENST00000628646 TTTY13Q9BZ97 58 aa8.96□□□□□ -0.98
SYNGAP1-207ENST00000628646 TRBV27A0A0K0K1C4 114 aa8.96□□□□□ -0.98
SYNGAP1-207ENST00000628646 PSMB2P49721 201 aa8.96□□□□□ -0.98
SYNGAP1-207ENST00000628646 POLR2KP53803 58 aaKnown RBP8.95□□□□□ -0.98
SYNGAP1-207ENST00000628646 OVOL2Q9BRP0 275 aa8.95□□□□□ -0.98
SYNGAP1-207ENST00000628646 SPCS1Q9Y6A9 102 aa8.95□□□□□ -0.98
SYNGAP1-207ENST00000628646 TRAV26-1A0A087WT03 109 aa8.95□□□□□ -0.98
SYNGAP1-207ENST00000628646 M0QY20 66 aa8.95□□□□□ -0.98
SYNGAP1-207ENST00000628646 ZNF479Q96JC4 524 aa8.95□□□□□ -0.98
SYNGAP1-207ENST00000628646 TMEM238C9JI98 176 aa8.95□□□□□ -0.98
SYNGAP1-207ENST00000628646 C20orf203Q8NBC4 194 aa8.95□□□□□ -0.98
SYNGAP1-207ENST00000628646 RBMY1A1P0DJD3 496 aaKnown RBP8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 RBMY1CP0DJD4 496 aa8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 RBMY1FQ15415 496 aaKnown RBP8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 KRTAP21-3Q3LHN1 58 aa8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 TRBV10-1A0A0K0K1A3 114 aa8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 B9D2Q9BPU9 175 aa8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 FBN1P35555 2871 aaKnown RBP8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 K7EP13 123 aa8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 TRBV25-1A0A075B6N4 114 aa8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 E9PLD3 99 aa8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 CRYGDP07320 174 aa8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 PRO0255Q9UI72 69 aa8.94□□□□□ -0.98
SYNGAP1-207ENST00000628646 RPL24P83731 157 aaKnown RBP8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 NEXN-AS1Q8NBZ9 246 aa8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 TIMM21Q9BVV7 248 aa8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 CST9LQ9H4G1 147 aa8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 C9orf118A6NHY6 69 aa8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 COX6CP09669 75 aa8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 MRPL23Q16540 153 aaKnown RBP8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 TRAV4A0A0B4J268 109 aa8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 CRYBA4P53673 196 aa8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 ICOSQ9Y6W8 199 aa8.93□□□□□ -0.98
SYNGAP1-207ENST00000628646 MAPKAPK5-AS1Q8N8E1 139 aa8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 LOC107984156A0A0G2JMH3 177 aa8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 ARL17AQ8IVW1 177 aa8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 CEND1Q8N111 149 aa8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 PTH2Q96A98 100 aa8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 TRAV10A0A0B4J240 114 aa8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 WIPF1O43516 503 aa8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 DAZ2Q13117 558 aaKnown RBP8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 Q6ZTC4 211 aa8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 DAZ4Q86SG3 579 aaKnown RBP8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 DAZ3Q9NR90 486 aaKnown RBP8.92□□□□□ -0.98
SYNGAP1-207ENST00000628646 TSHBP01222 138 aa8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 LINC00467Q9BRT7 94 aa8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 J3QQQ9 107 aa8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 K7EQD1 137 aa8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 UFSP1Q6NVU6 142 aa8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 TMEM243Q9BU79 118 aa8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 APOMO95445 188 aa8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 CCL18P55774 89 aa8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 RPL39P62891 51 aaKnown RBP8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 C11orf86A6NJI1 115 aa8.91□□□□□ -0.98
SYNGAP1-207ENST00000628646 TRBV7-3A0A075B6L6 115 aa8.9□□□□□ -0.98
SYNGAP1-207ENST00000628646 RS1O15537 224 aa8.9□□□□□ -0.98
SYNGAP1-207ENST00000628646 MEIG1Q5JSS6 88 aa8.9□□□□□ -0.98
SYNGAP1-207ENST00000628646 ATP6V0E2Q8NHE4 81 aa8.9□□□□□ -0.99
SYNGAP1-207ENST00000628646 X6R8D5 127 aa8.9□□□□□ -0.99
SYNGAP1-207ENST00000628646 LEPROTO15243 131 aa8.89□□□□□ -0.99
SYNGAP1-207ENST00000628646 RBX1P62877 108 aa8.89□□□□□ -0.99
SYNGAP1-207ENST00000628646 CFAP126Q5VTH2 177 aa8.89□□□□□ -0.99
SYNGAP1-207ENST00000628646 P0DMU3 169 aa8.89□□□□□ -0.99
SYNGAP1-207ENST00000628646 FAM231AP0DMU4 169 aa8.89□□□□□ -0.99
SYNGAP1-207ENST00000628646 FAM231CP0DMU5 169 aa8.89□□□□□ -0.99
SYNGAP1-207ENST00000628646 CELA1Q9UNI1 258 aa8.88□□□□□ -0.99
SYNGAP1-207ENST00000628646 CRPP02741 224 aa8.88□□□□□ -0.99
SYNGAP1-207ENST00000628646 FXYD2P54710 66 aa8.88□□□□□ -0.99
SYNGAP1-207ENST00000628646 A8MTW9 85 aa8.88□□□□□ -0.99
SYNGAP1-207ENST00000628646 HERVK_113P63121 156 aa8.88□□□□□ -0.99
SYNGAP1-207ENST00000628646 PYGO1Q9Y3Y4 419 aa8.88□□□□□ -0.99
SYNGAP1-207ENST00000628646 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
SYNGAP1-207ENST00000628646 IGHV3-64A0A075B6Q5 118 aa8.87□□□□□ -0.99
SYNGAP1-207ENST00000628646 GAGE6Q13070 117 aa8.87□□□□□ -0.99
SYNGAP1-207ENST00000628646 TM2D2Q9BX73 214 aa8.87□□□□□ -0.99
SYNGAP1-207ENST00000628646 VWFP04275 2813 aa8.87□□□□□ -0.99
SYNGAP1-207ENST00000628646 GIG44P09565 113 aaPredicted RBP8.86□□□□□ -0.99
SYNGAP1-207ENST00000628646 SLC25A29Q8N8R3 303 aa8.86□□□□□ -0.99
SYNGAP1-207ENST00000628646 A0A0J9YXV3 536 aa8.86□□□□□ -0.99
SYNGAP1-207ENST00000628646 KPRPQ5T749 579 aaPredicted RBP8.86□□□□□ -0.99
SYNGAP1-207ENST00000628646 IGLV4-69A0A075B6H9 119 aa8.86□□□□□ -0.99
SYNGAP1-207ENST00000628646 A8MZ25 164 aa8.85□□□□□ -0.99
SYNGAP1-207ENST00000628646 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.85□□□□□ -0.99
SYNGAP1-207ENST00000628646 IGKV2-29A2NJV5 120 aaPredicted RBP8.85□□□□□ -0.99
SYNGAP1-207ENST00000628646 TRAV13-1A0A0B4J241 112 aa8.85□□□□□ -0.99
SYNGAP1-207ENST00000628646 C12orf74Q32Q52 190 aa8.85□□□□□ -0.99
SYNGAP1-207ENST00000628646 Q8NAQ8 132 aa8.85□□□□□ -0.99
SYNGAP1-207ENST00000628646 NDUFA12Q9UI09 145 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms