RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 RPL37AP61513 92 aaKnown RBP6.94□□□□□ -1.3
SSBP4-215ENST00000625926 MRPL52Q86TS9 123 aaKnown RBP6.94□□□□□ -1.3
SSBP4-215ENST00000625926 C15orf56Q8N910 161 aa6.94□□□□□ -1.3
SSBP4-215ENST00000625926 VPS13BQ7Z7G8 4022 aa6.94□□□□□ -1.3
SSBP4-215ENST00000625926 LINC00959A0A1B0GUT2 108 aa6.93□□□□□ -1.3
SSBP4-215ENST00000625926 C7orf77A4D0Y5 90 aa6.93□□□□□ -1.3
SSBP4-215ENST00000625926 SMKR1H3BMG3 65 aa6.93□□□□□ -1.3
SSBP4-215ENST00000625926 FCER1GP30273 86 aa6.93□□□□□ -1.3
SSBP4-215ENST00000625926 XCL1P47992 114 aa6.93□□□□□ -1.3
SSBP4-215ENST00000625926 SUMO2P61956 95 aaKnown RBP6.93□□□□□ -1.3
SSBP4-215ENST00000625926 CIRBPQ14011 172 aaKnown RBP6.93□□□□□ -1.3
SSBP4-215ENST00000625926 HIGD2BQ4VC39 106 aa6.93□□□□□ -1.3
SSBP4-215ENST00000625926 FAM104BQ5XKR9 115 aa6.93□□□□□ -1.3
SSBP4-215ENST00000625926 ZNF664Q8N3J9 261 aa6.93□□□□□ -1.3
SSBP4-215ENST00000625926 CDC42SE2Q9NRR3 84 aa6.93□□□□□ -1.3
SSBP4-215ENST00000625926 A0A1B0GW15 77 aa6.92□□□□□ -1.3
SSBP4-215ENST00000625926 CCL25O15444 150 aa6.92□□□□□ -1.3
SSBP4-215ENST00000625926 CAMPP49913 170 aa6.92□□□□□ -1.3
SSBP4-215ENST00000625926 SMAGPQ0VAQ4 97 aa6.92□□□□□ -1.3
SSBP4-215ENST00000625926 FOXI1Q12951 378 aa6.92□□□□□ -1.3
SSBP4-215ENST00000625926 SS18Q15532 418 aa6.92□□□□□ -1.3
SSBP4-215ENST00000625926 MRPL51Q4U2R6 128 aaKnown RBP6.92□□□□□ -1.3
SSBP4-215ENST00000625926 NRACQ8N912 160 aa6.92□□□□□ -1.3
SSBP4-215ENST00000625926 KIR2DL4Q99706 377 aa6.92□□□□□ -1.3
SSBP4-215ENST00000625926 GVQW2A0A096LPI5 108 aaPredicted RBP6.91□□□□□ -1.3
SSBP4-215ENST00000625926 LINC00862A6NCI5 91 aa6.91□□□□□ -1.3
SSBP4-215ENST00000625926 PPP1R2P9O14990 202 aa6.91□□□□□ -1.3
SSBP4-215ENST00000625926 RNF213Q63HN8 5207 aa6.91□□□□□ -1.3
SSBP4-215ENST00000625926 A0A087WYN8 130 aa6.9□□□□□ -1.3
SSBP4-215ENST00000625926 OXTP01178 125 aa6.9□□□□□ -1.3
SSBP4-215ENST00000625926 S100A8P05109 93 aa6.9□□□□□ -1.3
SSBP4-215ENST00000625926 CHTF8P0CG12 524 aa6.9□□□□□ -1.3
SSBP4-215ENST00000625926 CKS2P33552 79 aa6.9□□□□□ -1.3
SSBP4-215ENST00000625926 COX6A2Q02221 97 aa6.9□□□□□ -1.3
SSBP4-215ENST00000625926 CD164L2Q6UWJ8 174 aa6.9□□□□□ -1.3
SSBP4-215ENST00000625926 SPACA4Q8TDM5 124 aa6.9□□□□□ -1.3
SSBP4-215ENST00000625926 C20orf78Q9BR46 151 aa6.9□□□□□ -1.3
SSBP4-215ENST00000625926 CSDC2Q9Y534 153 aaKnown RBP6.9□□□□□ -1.3
SSBP4-215ENST00000625926 TRBV24-1A0A075B6N3 115 aa6.89□□□□□ -1.31
SSBP4-215ENST00000625926 IGHV1-58A0A0C4DH39 117 aa6.89□□□□□ -1.31
SSBP4-215ENST00000625926 F8W036 122 aa6.89□□□□□ -1.31
SSBP4-215ENST00000625926 TMEM18Q96B42 140 aa6.89□□□□□ -1.31
SSBP4-215ENST00000625926 UBE2D4Q9Y2X8 147 aa6.89□□□□□ -1.31
SSBP4-215ENST00000625926 C1orf196B1AJZ1 125 aa6.88□□□□□ -1.31
SSBP4-215ENST00000625926 TCAPO15273 167 aa6.88□□□□□ -1.31
SSBP4-215ENST00000625926 TNFRSF6BO95407 300 aa6.88□□□□□ -1.31
SSBP4-215ENST00000625926 RPL32P62910 135 aaKnown RBP6.88□□□□□ -1.31
SSBP4-215ENST00000625926 HBBP68871 147 aa6.88□□□□□ -1.31
SSBP4-215ENST00000625926 MRPL54Q6P161 138 aaKnown RBP6.88□□□□□ -1.31
SSBP4-215ENST00000625926 PRSS3P2Q8NHM4 247 aa6.88□□□□□ -1.31
SSBP4-215ENST00000625926 FLG2Q5D862 2391 aaPredicted RBP6.87□□□□□ -1.31
SSBP4-215ENST00000625926 A0A1B0GXF2 115 aa6.87□□□□□ -1.31
SSBP4-215ENST00000625926 ZNF561-AS1K7EIQ3 104 aa6.87□□□□□ -1.31
SSBP4-215ENST00000625926 PPBPP02775 128 aa6.87□□□□□ -1.31
SSBP4-215ENST00000625926 MAJINQ3KP22 176 aa6.87□□□□□ -1.31
SSBP4-215ENST00000625926 TIMM21Q9BVV7 248 aa6.87□□□□□ -1.31
SSBP4-215ENST00000625926 PLAC8Q9NZF1 115 aa6.87□□□□□ -1.31
SSBP4-215ENST00000625926 PKIGQ9Y2B9 76 aa6.87□□□□□ -1.31
SSBP4-215ENST00000625926 TRAV13-1A0A0B4J241 112 aa6.86□□□□□ -1.31
SSBP4-215ENST00000625926 IGKV2-24A0A0C4DH68 120 aa6.86□□□□□ -1.31
SSBP4-215ENST00000625926 D6R8Y8 96 aa6.86□□□□□ -1.31
SSBP4-215ENST00000625926 MALP21145 153 aa6.86□□□□□ -1.31
SSBP4-215ENST00000625926 HNRNPA3P51991 378 aaKnown RBP6.86□□□□□ -1.31
SSBP4-215ENST00000625926 RAB14P61106 215 aa6.86□□□□□ -1.31
SSBP4-215ENST00000625926 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
SSBP4-215ENST00000625926 C7orf33Q8WU49 177 aa6.86□□□□□ -1.31
SSBP4-215ENST00000625926 LINC00526Q96FQ7 95 aa6.86□□□□□ -1.31
SSBP4-215ENST00000625926 LINC00474Q9P2X8 69 aa6.86□□□□□ -1.31
SSBP4-215ENST00000625926 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
SSBP4-215ENST00000625926 COX7A2LO14548 114 aa6.85□□□□□ -1.31
SSBP4-215ENST00000625926 PHOX2AO14813 284 aa6.85□□□□□ -1.31
SSBP4-215ENST00000625926 SYCNQ0VAF6 134 aa6.85□□□□□ -1.31
SSBP4-215ENST00000625926 ATP5L2Q7Z4Y8 100 aa6.85□□□□□ -1.31
SSBP4-215ENST00000625926 CARD19Q96LW7 228 aa6.85□□□□□ -1.31
SSBP4-215ENST00000625926 SMIM2Q9BVW6 85 aa6.85□□□□□ -1.31
SSBP4-215ENST00000625926 A0A096LNI7 61 aa6.84□□□□□ -1.31
SSBP4-215ENST00000625926 NPYP01303 97 aa6.84□□□□□ -1.31
SSBP4-215ENST00000625926 PNRC1Q12796 327 aaPredicted RBP6.84□□□□□ -1.31
SSBP4-215ENST00000625926 TMEM136Q6ZRR5 245 aa6.84□□□□□ -1.31
SSBP4-215ENST00000625926 Q6ZUT4 128 aa6.84□□□□□ -1.31
SSBP4-215ENST00000625926 ORMDL3Q8N138 153 aa6.84□□□□□ -1.31
SSBP4-215ENST00000625926 STPG4Q8N801 248 aa6.84□□□□□ -1.31
SSBP4-215ENST00000625926 IGLV4-69A0A075B6H9 119 aa6.83□□□□□ -1.32
SSBP4-215ENST00000625926 APOMO95445 188 aa6.83□□□□□ -1.32
SSBP4-215ENST00000625926 RAB5AP20339 215 aa6.83□□□□□ -1.32
SSBP4-215ENST00000625926 RPL39P62891 51 aaKnown RBP6.83□□□□□ -1.32
SSBP4-215ENST00000625926 Q6ZRU5 148 aa6.83□□□□□ -1.32
SSBP4-215ENST00000625926 ANAPC16Q96DE5 110 aa6.83□□□□□ -1.32
SSBP4-215ENST00000625926 SPANXA1Q9NS26 97 aa6.83□□□□□ -1.32
SSBP4-215ENST00000625926 MT-ND4LP03901 98 aa6.82□□□□□ -1.32
SSBP4-215ENST00000625926 MRPS36P82909 103 aaKnown RBP6.82□□□□□ -1.32
SSBP4-215ENST00000625926 SERTAD4-AS1Q5TG53 156 aa6.82□□□□□ -1.32
SSBP4-215ENST00000625926 C5orf38Q86SI9 138 aa6.82□□□□□ -1.32
SSBP4-215ENST00000625926 PRELID3AQ96N28 172 aa6.82□□□□□ -1.32
SSBP4-215ENST00000625926 CAMK2N2Q96S95 79 aa6.82□□□□□ -1.32
SSBP4-215ENST00000625926 FAM104AQ969W3 186 aa6.81□□□□□ -1.32
SSBP4-215ENST00000625926 C2orf48Q96LS8 159 aa6.81□□□□□ -1.32
SSBP4-215ENST00000625926 OPRPNQ99935 248 aaPredicted RBP6.81□□□□□ -1.32
SSBP4-215ENST00000625926 KRTAP9-2Q9BYQ4 174 aa6.81□□□□□ -1.32
SSBP4-215ENST00000625926 LOC107984640A0A0U1RRK4 108 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms