RNA–Protein interactions for RNA: ENST00000625581.2

SOX2-OT-237, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 495 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-237ENST00000625581 TRAV8-4A0A0B4J246 113 aa9.52□□□□□ -0.89
SOX2-OT-237ENST00000625581 SNAPINO95295 136 aa9.52□□□□□ -0.89
SOX2-OT-237ENST00000625581 HLA-DQA1P01909 254 aa9.52□□□□□ -0.89
SOX2-OT-237ENST00000625581 NTN5Q8WTR8 489 aaPredicted RBP9.52□□□□□ -0.89
SOX2-OT-237ENST00000625581 UBE2D4Q9Y2X8 147 aa9.52□□□□□ -0.89
SOX2-OT-237ENST00000625581 TCAPO15273 167 aa9.51□□□□□ -0.89
SOX2-OT-237ENST00000625581 OR5A1Q8NGJ0 315 aa9.51□□□□□ -0.89
SOX2-OT-237ENST00000625581 GNB1LQ9BYB4 327 aa9.51□□□□□ -0.89
SOX2-OT-237ENST00000625581 CDC42SE2Q9NRR3 84 aa9.51□□□□□ -0.89
SOX2-OT-237ENST00000625581 IGKV3OR2-268A0A0C4DH90 116 aa9.5□□□□□ -0.89
SOX2-OT-237ENST00000625581 RPL39P62891 51 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-237ENST00000625581 KIAA1644Q3SXP7 199 aa9.5□□□□□ -0.89
SOX2-OT-237ENST00000625581 SLC7A5P1Q8MH63 180 aa9.5□□□□□ -0.89
SOX2-OT-237ENST00000625581 TMEM101Q96IK0 257 aa9.5□□□□□ -0.89
SOX2-OT-237ENST00000625581 MAP1LC3AQ9H492 121 aa9.5□□□□□ -0.89
SOX2-OT-237ENST00000625581 CSDC2Q9Y534 153 aaKnown RBP9.5□□□□□ -0.89
SOX2-OT-237ENST00000625581 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.49□□□□□ -0.89
SOX2-OT-237ENST00000625581 IGLV5-52A0A0A0MRZ9 124 aa9.49□□□□□ -0.89
SOX2-OT-237ENST00000625581 TGIF2-C20orf24A0A0A6YYL0 155 aa9.49□□□□□ -0.89
SOX2-OT-237ENST00000625581 LOC389332A0A1B0GUA5 103 aa9.49□□□□□ -0.89
SOX2-OT-237ENST00000625581 USP17L23D6RBM5 183 aa9.49□□□□□ -0.89
SOX2-OT-237ENST00000625581 KRTAP10-1P60331 282 aa9.49□□□□□ -0.89
SOX2-OT-237ENST00000625581 FAM104AQ969W3 186 aa9.49□□□□□ -0.89
SOX2-OT-237ENST00000625581 TIMM21Q9BVV7 248 aa9.49□□□□□ -0.89
SOX2-OT-237ENST00000625581 KRTAP17-1Q9BYP8 105 aa9.49□□□□□ -0.89
SOX2-OT-237ENST00000625581 CDK2AP2O75956 126 aa9.48□□□□□ -0.89
SOX2-OT-237ENST00000625581 Q6ZUT4 128 aa9.48□□□□□ -0.89
SOX2-OT-237ENST00000625581 ZNF664Q8N3J9 261 aa9.48□□□□□ -0.89
SOX2-OT-237ENST00000625581 Q8N8P6 123 aa9.48□□□□□ -0.89
SOX2-OT-237ENST00000625581 CHCHD10Q8WYQ3 142 aaPredicted RBP9.48□□□□□ -0.89
SOX2-OT-237ENST00000625581 YPEL4Q96NS1 127 aa9.48□□□□□ -0.89
SOX2-OT-237ENST00000625581 DNAH8Q96JB1 4490 aa9.47□□□□□ -0.89
SOX2-OT-237ENST00000625581 LINC00959A0A1B0GUT2 108 aa9.47□□□□□ -0.89
SOX2-OT-237ENST00000625581 MT-ND6P03923 174 aa9.47□□□□□ -0.89
SOX2-OT-237ENST00000625581 GCSHP23434 173 aa9.47□□□□□ -0.89
SOX2-OT-237ENST00000625581 COX19Q49B96 90 aa9.47□□□□□ -0.89
SOX2-OT-237ENST00000625581 GAGE12HA6NDE8 117 aa9.46□□□□□ -0.9
SOX2-OT-237ENST00000625581 SMAGPQ0VAQ4 97 aa9.46□□□□□ -0.9
SOX2-OT-237ENST00000625581 RNASE13Q5GAN3 156 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-237ENST00000625581 TMEM18Q96B42 140 aa9.46□□□□□ -0.9
SOX2-OT-237ENST00000625581 ALKBH7Q9BT30 221 aaPredicted RBP9.46□□□□□ -0.9
SOX2-OT-237ENST00000625581 MRPL18Q9H0U6 180 aaKnown RBP9.46□□□□□ -0.9
SOX2-OT-237ENST00000625581 PRSS1P07477 247 aa9.45□□□□□ -0.9
SOX2-OT-237ENST00000625581 RAB5AP20339 215 aa9.45□□□□□ -0.9
SOX2-OT-237ENST00000625581 FOXI1Q12951 378 aa9.45□□□□□ -0.9
SOX2-OT-237ENST00000625581 C14orf177Q52M58 125 aa9.45□□□□□ -0.9
SOX2-OT-237ENST00000625581 DGAT2L7PQ6IED9 249 aa9.45□□□□□ -0.9
SOX2-OT-237ENST00000625581 SPANXA1Q9NS26 97 aa9.45□□□□□ -0.9
SOX2-OT-237ENST00000625581 IFI27P40305 119 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-237ENST00000625581 C15orf56Q8N910 161 aa9.44□□□□□ -0.9
SOX2-OT-237ENST00000625581 OPRPNQ99935 248 aaPredicted RBP9.44□□□□□ -0.9
SOX2-OT-237ENST00000625581 NXT2Q9NPJ8 142 aaKnown RBP9.44□□□□□ -0.9
SOX2-OT-237ENST00000625581 K7EMI3 77 aa9.43□□□□□ -0.9
SOX2-OT-237ENST00000625581 CCL25O15444 150 aa9.43□□□□□ -0.9
SOX2-OT-237ENST00000625581 XCL1P47992 114 aa9.43□□□□□ -0.9
SOX2-OT-237ENST00000625581 MRPS36P82909 103 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-237ENST00000625581 CBLN2Q8IUK8 224 aa9.43□□□□□ -0.9
SOX2-OT-237ENST00000625581 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
SOX2-OT-237ENST00000625581 FABP9Q0Z7S8 132 aa9.42□□□□□ -0.9
SOX2-OT-237ENST00000625581 LINC01620Q4KN68 170 aa9.42□□□□□ -0.9
SOX2-OT-237ENST00000625581 ORMDL2Q53FV1 153 aa9.42□□□□□ -0.9
SOX2-OT-237ENST00000625581 PYGO1Q9Y3Y4 419 aa9.42□□□□□ -0.9
SOX2-OT-237ENST00000625581 IGLV4-3A0A075B6K6 122 aa9.41□□□□□ -0.9
SOX2-OT-237ENST00000625581 LINC01546A6NGU7 62 aa9.41□□□□□ -0.9
SOX2-OT-237ENST00000625581 SS18Q15532 418 aa9.41□□□□□ -0.9
SOX2-OT-237ENST00000625581 C2orf66Q6UXQ4 117 aa9.41□□□□□ -0.9
SOX2-OT-237ENST00000625581 TRAV13-1A0A0B4J241 112 aa9.4□□□□□ -0.9
SOX2-OT-237ENST00000625581 XGP55808 180 aa9.4□□□□□ -0.9
SOX2-OT-237ENST00000625581 CD164L2Q6UWJ8 174 aa9.4□□□□□ -0.9
SOX2-OT-237ENST00000625581 Q6ZSA8 131 aa9.4□□□□□ -0.9
SOX2-OT-237ENST00000625581 FAM30AQ9NZY2 134 aa9.4□□□□□ -0.9
SOX2-OT-237ENST00000625581 CYSLTR1Q9Y271 337 aa9.4□□□□□ -0.9
SOX2-OT-237ENST00000625581 TRAPPC1Q9Y5R8 145 aa9.4□□□□□ -0.9
SOX2-OT-237ENST00000625581 hDV102S1A0JD36 115 aa9.39□□□□□ -0.91
SOX2-OT-237ENST00000625581 C1orf196B1AJZ1 125 aa9.39□□□□□ -0.91
SOX2-OT-237ENST00000625581 SLPIP03973 132 aa9.39□□□□□ -0.91
SOX2-OT-237ENST00000625581 SMCO4Q9NRQ5 59 aa9.39□□□□□ -0.91
SOX2-OT-237ENST00000625581 GVQW2A0A096LPI5 108 aaPredicted RBP9.38□□□□□ -0.91
SOX2-OT-237ENST00000625581 IGIPA6NJ69 53 aa9.38□□□□□ -0.91
SOX2-OT-237ENST00000625581 CNBPP62633 177 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-237ENST00000625581 LINC00173Q6ZV60 143 aa9.38□□□□□ -0.91
SOX2-OT-237ENST00000625581 PRSS3P2Q8NHM4 247 aa9.38□□□□□ -0.91
SOX2-OT-237ENST00000625581 IFITM10A6NMD0 228 aa9.37□□□□□ -0.91
SOX2-OT-237ENST00000625581 HAMPP81172 84 aa9.37□□□□□ -0.91
SOX2-OT-237ENST00000625581 HIGD2BQ4VC39 106 aa9.37□□□□□ -0.91
SOX2-OT-237ENST00000625581 C18orf32Q8TCD1 76 aa9.37□□□□□ -0.91
SOX2-OT-237ENST00000625581 TOMM6Q96B49 74 aa9.37□□□□□ -0.91
SOX2-OT-237ENST00000625581 TMEM141Q96I45 108 aa9.37□□□□□ -0.91
SOX2-OT-237ENST00000625581 KRTAP4-5Q9BYR2 181 aa9.37□□□□□ -0.91
SOX2-OT-237ENST00000625581 CFAP161Q6P656 301 aa9.36□□□□□ -0.91
SOX2-OT-237ENST00000625581 C9orf163Q8N9P6 203 aa9.36□□□□□ -0.91
SOX2-OT-237ENST00000625581 URB1-AS1Q96HZ7 61 aa9.36□□□□□ -0.91
SOX2-OT-237ENST00000625581 IGHV1-58A0A0C4DH39 117 aa9.35□□□□□ -0.91
SOX2-OT-237ENST00000625581 NPSP0C0P6 89 aa9.35□□□□□ -0.91
SOX2-OT-237ENST00000625581 ZC2HC1BQ5TFG8 222 aa9.35□□□□□ -0.91
SOX2-OT-237ENST00000625581 AMELXQ99217 191 aa9.35□□□□□ -0.91
SOX2-OT-237ENST00000625581 ABCA13Q86UQ4 5058 aa9.35□□□□□ -0.91
SOX2-OT-237ENST00000625581 IGHV3OR16-9A0A0B4J2B5 98 aa9.34□□□□□ -0.91
SOX2-OT-237ENST00000625581 COX7A2LO14548 114 aa9.34□□□□□ -0.91
SOX2-OT-237ENST00000625581 TEX43Q6ZNM6 134 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms