RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, human

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00963-218	ENST00000624138	LCE2C	Q5TA81	110 aa		4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	TMEM101	Q96IK0	257 aa		4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	BTF3L4	Q96K17	158 aa		4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	CDC42SE2	Q9NRR3	84 aa		4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	MRPL35	Q9NZE8	188 aa	Known RBP	4.18	□□□□□ -1.74
LINC00963-218	ENST00000624138	COX7A2L	O14548	114 aa		4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	TRGC1	P0CF51	173 aa		4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	MAL	P21145	153 aa		4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	UBE2B	P63146	152 aa		4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	LINC00173	Q6ZV60	143 aa		4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	BAGE2	Q86Y30	109 aa		4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	GATD1	Q8NB37	220 aa		4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	IMMP2L	Q96T52	175 aa		4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	CCDC32	Q9BV29	185 aa		4.17	□□□□□ -1.74
LINC00963-218	ENST00000624138	C1orf196	B1AJZ1	125 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138		F2Z2F3	143 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138	INMT-MINDY4	F8WBC2	141 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138		F8WDY8	70 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138		M0QXV9	152 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138	TNFRSF6B	O95407	300 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138	SCGB1D1	O95968	90 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138	KRTAP13-2	Q52LG2	175 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138	MRPL52	Q86TS9	123 aa	Known RBP	4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138	OR2D3	Q8NGH3	330 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138	STOML3	Q8TAV4	291 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138	PPDPF	Q9H3Y8	114 aa		4.16	□□□□□ -1.74
LINC00963-218	ENST00000624138	NUPR1	O60356	82 aa		4.15	□□□□□ -1.75
LINC00963-218	ENST00000624138	TSHB	P01222	138 aa		4.15	□□□□□ -1.75
LINC00963-218	ENST00000624138	RPS20	P60866	119 aa	Known RBP	4.15	□□□□□ -1.75
LINC00963-218	ENST00000624138	TMEM241	Q24JQ0	296 aa		4.15	□□□□□ -1.75
LINC00963-218	ENST00000624138	CST9LP1	Q5W188	147 aa		4.15	□□□□□ -1.75
LINC00963-218	ENST00000624138	LINC00304	Q8N9R0	145 aa		4.15	□□□□□ -1.75
LINC00963-218	ENST00000624138	RPL39L	Q96EH5	51 aa	Known RBP	4.15	□□□□□ -1.75
LINC00963-218	ENST00000624138	TPPP3	Q9BW30	176 aa		4.15	□□□□□ -1.75
LINC00963-218	ENST00000624138	SDHAF1	A6NFY7	115 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138		I3L3M4	83 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	CFC1B	P0CG36	223 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	LOR	P23490	312 aa	Predicted RBP	4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	MT1H	P80294	61 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	SPAG11B	Q08648	103 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	KRTAP19-2	Q3LHN2	52 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	LINC00242	Q5T6M2	205 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	LYZL1	Q6UWQ5	148 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	OR10D4P	Q8NGN7	298 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	FAM210A	Q96ND0	272 aa		4.14	□□□□□ -1.75
LINC00963-218	ENST00000624138	SCO2	A0A1W2PP80	73 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	MAP1LC3B2	A6NCE7	125 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	PAGE4	O60829	102 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	PMCH	P20382	165 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	GAGE2E	Q4V326	116 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	C10orf25	Q5T742	122 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	TMUB2	Q71RG4	321 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	C5orf38	Q86SI9	138 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	C9orf62	Q8N4C0	152 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	MAP1LC3B	Q9GZQ8	125 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	SMDT1	Q9H4I9	107 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	C6orf48	Q9UBA6	75 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	GAGE2D	Q9UEU5	116 aa		4.13	□□□□□ -1.75
LINC00963-218	ENST00000624138	TRBV6-5	A0A0K0K1A5	114 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138		H3BS24	57 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	NDUFA1	O15239	70 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	SEC61B	P60468	96 aa	Known RBP	4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	KRTAP13-3	Q3SY46	172 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	RPL7L1	Q6DKI1	246 aa	Known RBP	4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	TEX261	Q6UWH6	196 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	LINC00337	Q8N6G1	96 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	MRAP2	Q96G30	205 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	MARVELD1	Q9BSK0	173 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	CNFN	Q9BYD5	112 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	CTDSP1	Q9GZU7	261 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	CYTL1	Q9NRR1	136 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	ANAPC11	Q9NYG5	84 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	CSDC2	Q9Y534	153 aa	Known RBP	4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	ALG5	Q9Y673	324 aa		4.12	□□□□□ -1.75
LINC00963-218	ENST00000624138	XKRY2	A2RUG3	117 aa		4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	SSNA1	O43805	119 aa		4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	CTRL	P40313	264 aa		4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	RPL28	P46779	137 aa	Known RBP	4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	KRTAP10-6	P60371	365 aa	Predicted RBP	4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	FAM229B	Q4G0N7	80 aa		4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	C9orf129	Q5T035	196 aa	Known RBP	4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	AKR1C8P	Q5T2L2	129 aa		4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	FP248	Q71RG6	208 aa	Predicted RBP	4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	ENKUR	Q8TC29	256 aa		4.11	□□□□□ -1.75
LINC00963-218	ENST00000624138	BORCS7-ASMT	A0A0B4J1R7	106 aa		4.1	□□□□□ -1.75
LINC00963-218	ENST00000624138	IFNA1	P01562	189 aa		4.1	□□□□□ -1.75
LINC00963-218	ENST00000624138	RPL35	P42766	123 aa	Known RBP	4.1	□□□□□ -1.75
LINC00963-218	ENST00000624138	POLR2K	P53803	58 aa	Known RBP	4.1	□□□□□ -1.75
LINC00963-218	ENST00000624138	DEFA1	P59665	94 aa		4.1	□□□□□ -1.75
LINC00963-218	ENST00000624138	TWIST1	Q15672	202 aa		4.1	□□□□□ -1.75
LINC00963-218	ENST00000624138	ORAOV1	Q8WV07	137 aa		4.1	□□□□□ -1.75
LINC00963-218	ENST00000624138	TRAV13-1	A0A0B4J241	112 aa		4.09	□□□□□ -1.75
LINC00963-218	ENST00000624138	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.09	□□□□□ -1.75
LINC00963-218	ENST00000624138	C7orf77	A4D0Y5	90 aa		4.09	□□□□□ -1.75
LINC00963-218	ENST00000624138	NDUFC2-KCTD14	E9PQ53	114 aa		4.09	□□□□□ -1.75
LINC00963-218	ENST00000624138	BCE1	O60756	84 aa		4.09	□□□□□ -1.75
LINC00963-218	ENST00000624138	KIAA0087	Q14695	138 aa		4.09	□□□□□ -1.75
LINC00963-218	ENST00000624138	RNASE7	Q9H1E1	156 aa	Known RBP	4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms