RNA–Protein interactions for RNA: ENST00000623915.1

PCDHB5-202, Transcript of protocadherin beta 5, humanhuman

TSL 3

Gene PCDHB5, Length 869 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB5-202ENST00000623915 LINC00269Q8N2A0 174 aa12.13□□□□□ -0.47
PCDHB5-202ENST00000623915 SMIM2Q9BVW6 85 aa12.13□□□□□ -0.47
PCDHB5-202ENST00000623915 C1orf43Q9BWL3 253 aa12.13□□□□□ -0.47
PCDHB5-202ENST00000623915 TMEM136Q6ZRR5 245 aa12.12□□□□□ -0.47
PCDHB5-202ENST00000623915 IGKV2D-24A0A075B6R9 120 aa12.11□□□□□ -0.47
PCDHB5-202ENST00000623915 NPYP01303 97 aa12.11□□□□□ -0.47
PCDHB5-202ENST00000623915 FGF6P10767 208 aa12.11□□□□□ -0.47
PCDHB5-202ENST00000623915 S100PP25815 95 aa12.11□□□□□ -0.47
PCDHB5-202ENST00000623915 SMAGPQ0VAQ4 97 aa12.11□□□□□ -0.47
PCDHB5-202ENST00000623915 SVBPQ8N300 66 aa12.11□□□□□ -0.47
PCDHB5-202ENST00000623915 Q8N814 137 aa12.11□□□□□ -0.47
PCDHB5-202ENST00000623915 TIMM21Q9BVV7 248 aa12.11□□□□□ -0.47
PCDHB5-202ENST00000623915 SNAPINO95295 136 aa12.1□□□□□ -0.47
PCDHB5-202ENST00000623915 HLA-DQA1P01909 254 aa12.1□□□□□ -0.47
PCDHB5-202ENST00000623915 PRELID3AQ96N28 172 aa12.1□□□□□ -0.47
PCDHB5-202ENST00000623915 GNB1LQ9BYB4 327 aa12.1□□□□□ -0.47
PCDHB5-202ENST00000623915 K7EMI3 77 aa12.09□□□□□ -0.47
PCDHB5-202ENST00000623915 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.08□□□□□ -0.48
PCDHB5-202ENST00000623915 IGKV2-29A2NJV5 120 aaPredicted RBP12.08□□□□□ -0.48
PCDHB5-202ENST00000623915 FCER1GP30273 86 aa12.08□□□□□ -0.48
PCDHB5-202ENST00000623915 AMMECR1LQ6DCA0 310 aa12.08□□□□□ -0.48
PCDHB5-202ENST00000623915 TMEM18Q96B42 140 aa12.08□□□□□ -0.48
PCDHB5-202ENST00000623915 SMR3BP02814 79 aaPredicted RBP12.07□□□□□ -0.48
PCDHB5-202ENST00000623915 MT-ND6P03923 174 aa12.07□□□□□ -0.48
PCDHB5-202ENST00000623915 GCSHP23434 173 aa12.07□□□□□ -0.48
PCDHB5-202ENST00000623915 HAMPP81172 84 aa12.07□□□□□ -0.48
PCDHB5-202ENST00000623915 DEFB104AQ8WTQ1 72 aa12.07□□□□□ -0.48
PCDHB5-202ENST00000623915 RPS10P5Q9NQ39 176 aa12.07□□□□□ -0.48
PCDHB5-202ENST00000623915 APOC3P02656 99 aa12.06□□□□□ -0.48
PCDHB5-202ENST00000623915 WFDC2Q14508 124 aa12.06□□□□□ -0.48
PCDHB5-202ENST00000623915 C14orf177Q52M58 125 aa12.06□□□□□ -0.48
PCDHB5-202ENST00000623915 OR5A1Q8NGJ0 315 aa12.06□□□□□ -0.48
PCDHB5-202ENST00000623915 CDC42SE2Q9NRR3 84 aa12.06□□□□□ -0.48
PCDHB5-202ENST00000623915 UBE2D4Q9Y2X8 147 aa12.06□□□□□ -0.48
PCDHB5-202ENST00000623915 CCL25O15444 150 aa12.05□□□□□ -0.48
PCDHB5-202ENST00000623915 TMEM101Q96IK0 257 aa12.05□□□□□ -0.48
PCDHB5-202ENST00000623915 RNASEKQ6P5S7 137 aaKnown RBP12.04□□□□□ -0.48
PCDHB5-202ENST00000623915 BAALCQ8WXS3 180 aa12.04□□□□□ -0.48
PCDHB5-202ENST00000623915 MAP1LC3AQ9H492 121 aa12.04□□□□□ -0.48
PCDHB5-202ENST00000623915 ZNF664Q8N3J9 261 aa12.03□□□□□ -0.48
PCDHB5-202ENST00000623915 Q8N8P6 123 aa12.03□□□□□ -0.48
PCDHB5-202ENST00000623915 MRPS36P82909 103 aaKnown RBP12.02□□□□□ -0.49
PCDHB5-202ENST00000623915 CLPSL2Q6UWE3 100 aa12.02□□□□□ -0.49
PCDHB5-202ENST00000623915 NXT2Q9NPJ8 142 aaKnown RBP12.02□□□□□ -0.49
PCDHB5-202ENST00000623915 SPANXA1Q9NS26 97 aa12.02□□□□□ -0.49
PCDHB5-202ENST00000623915 PYGO1Q9Y3Y4 419 aa12.01□□□□□ -0.49
PCDHB5-202ENST00000623915 IGLV5-52A0A0A0MRZ9 124 aa12□□□□□ -0.49
PCDHB5-202ENST00000623915 LINC01546A6NGU7 62 aa12□□□□□ -0.49
PCDHB5-202ENST00000623915 NPSP0C0P6 89 aa12□□□□□ -0.49
PCDHB5-202ENST00000623915 RAB5AP20339 215 aa12□□□□□ -0.49
PCDHB5-202ENST00000623915 FAM104AQ969W3 186 aa12□□□□□ -0.49
PCDHB5-202ENST00000623915 LINC00959A0A1B0GUT2 108 aa11.99□□□□□ -0.49
PCDHB5-202ENST00000623915 DGAT2L7PQ6IED9 249 aa11.99□□□□□ -0.49
PCDHB5-202ENST00000623915 YPEL4Q96NS1 127 aa11.99□□□□□ -0.49
PCDHB5-202ENST00000623915 USP17L23D6RBM5 183 aa11.98□□□□□ -0.49
PCDHB5-202ENST00000623915 ORMDL2Q53FV1 153 aa11.98□□□□□ -0.49
PCDHB5-202ENST00000623915 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
PCDHB5-202ENST00000623915 FAM30AQ9NZY2 134 aa11.98□□□□□ -0.49
PCDHB5-202ENST00000623915 IGLV10-54A0A075B6I4 117 aa11.97□□□□□ -0.49
PCDHB5-202ENST00000623915 FAM229AH3BQW9 127 aa11.97□□□□□ -0.49
PCDHB5-202ENST00000623915 G0S2P27469 103 aa11.97□□□□□ -0.49
PCDHB5-202ENST00000623915 ALKBH7Q9BT30 221 aaPredicted RBP11.97□□□□□ -0.49
PCDHB5-202ENST00000623915 C1orf196B1AJZ1 125 aa11.96□□□□□ -0.49
PCDHB5-202ENST00000623915 LECT2O14960 151 aa11.96□□□□□ -0.49
PCDHB5-202ENST00000623915 RPL39P62891 51 aaKnown RBP11.96□□□□□ -0.49
PCDHB5-202ENST00000623915 LINC01549A6NIU2 74 aa11.95□□□□□ -0.5
PCDHB5-202ENST00000623915 PRSS1P07477 247 aa11.95□□□□□ -0.5
PCDHB5-202ENST00000623915 CNBPP62633 177 aaKnown RBP11.95□□□□□ -0.5
PCDHB5-202ENST00000623915 FOXI1Q12951 378 aa11.95□□□□□ -0.5
PCDHB5-202ENST00000623915 SS18Q15532 418 aa11.95□□□□□ -0.5
PCDHB5-202ENST00000623915 CD164L2Q6UWJ8 174 aa11.95□□□□□ -0.5
PCDHB5-202ENST00000623915 MRPL18Q9H0U6 180 aaKnown RBP11.95□□□□□ -0.5
PCDHB5-202ENST00000623915 TGIF2-C20orf24A0A0A6YYL0 155 aa11.94□□□□□ -0.5
PCDHB5-202ENST00000623915 KIAA1644Q3SXP7 199 aa11.94□□□□□ -0.5
PCDHB5-202ENST00000623915 CFAP161Q6P656 301 aa11.94□□□□□ -0.5
PCDHB5-202ENST00000623915 Q6ZSA8 131 aa11.94□□□□□ -0.5
PCDHB5-202ENST00000623915 LOC389332A0A1B0GUA5 103 aa11.93□□□□□ -0.5
PCDHB5-202ENST00000623915 GAGE12HA6NDE8 117 aa11.93□□□□□ -0.5
PCDHB5-202ENST00000623915 IFI27P40305 119 aaPredicted RBP11.93□□□□□ -0.5
PCDHB5-202ENST00000623915 Q6ZUT4 128 aa11.93□□□□□ -0.5
PCDHB5-202ENST00000623915 CYSLTR1Q9Y271 337 aa11.93□□□□□ -0.5
PCDHB5-202ENST00000623915 C15orf56Q8N910 161 aa11.92□□□□□ -0.5
PCDHB5-202ENST00000623915 GVQW2A0A096LPI5 108 aaPredicted RBP11.91□□□□□ -0.5
PCDHB5-202ENST00000623915 FABP9Q0Z7S8 132 aa11.91□□□□□ -0.5
PCDHB5-202ENST00000623915 C2orf66Q6UXQ4 117 aa11.91□□□□□ -0.5
PCDHB5-202ENST00000623915 C9orf163Q8N9P6 203 aa11.91□□□□□ -0.5
PCDHB5-202ENST00000623915 SMCO4Q9NRQ5 59 aa11.91□□□□□ -0.5
PCDHB5-202ENST00000623915 LRP1Q07954 4544 aaKnown RBP11.9□□□□□ -0.5
PCDHB5-202ENST00000623915 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.9□□□□□ -0.5
PCDHB5-202ENST00000623915 IGIPA6NJ69 53 aa11.9□□□□□ -0.5
PCDHB5-202ENST00000623915 TRAPPC1Q9Y5R8 145 aa11.9□□□□□ -0.5
PCDHB5-202ENST00000623915 IGLV4-3A0A075B6K6 122 aa11.89□□□□□ -0.51
PCDHB5-202ENST00000623915 IGKV3OR2-268A0A0C4DH90 116 aa11.89□□□□□ -0.51
PCDHB5-202ENST00000623915 TOMM6Q96B49 74 aa11.89□□□□□ -0.51
PCDHB5-202ENST00000623915 TMEM141Q96I45 108 aa11.89□□□□□ -0.51
PCDHB5-202ENST00000623915 AMELXQ99217 191 aa11.89□□□□□ -0.51
PCDHB5-202ENST00000623915 TIMM17AQ99595 171 aa11.89□□□□□ -0.51
PCDHB5-202ENST00000623915 HMCN2Q8NDA2 5059 aa11.88□□□□□ -0.51
PCDHB5-202ENST00000623915 XCL1P47992 114 aa11.88□□□□□ -0.51
PCDHB5-202ENST00000623915 FAM19A3Q7Z5A8 133 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms