RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 PPDPFQ9H3Y8 114 aa10.22□□□□□ -0.77
LDB3-209ENST00000623056 PRB1P04280 392 aa10.21□□□□□ -0.77
LDB3-209ENST00000623056 BEAN1Q3B7T3 259 aa10.21□□□□□ -0.77
LDB3-209ENST00000623056 C10orf99Q6UWK7 81 aa10.21□□□□□ -0.77
LDB3-209ENST00000623056 SOSTDC1Q6X4U4 206 aa10.21□□□□□ -0.77
LDB3-209ENST00000623056 BBC3Q96PG8 261 aaPredicted RBP10.21□□□□□ -0.77
LDB3-209ENST00000623056 IGHV4-61A0A0C4DH41 118 aa10.21□□□□□ -0.78
LDB3-209ENST00000623056 SDIM1Q6ZPB5 146 aa10.21□□□□□ -0.78
LDB3-209ENST00000623056 IGLV5-39A0A0G2JS06 123 aa10.2□□□□□ -0.78
LDB3-209ENST00000623056 TRACP01848 142 aa10.2□□□□□ -0.78
LDB3-209ENST00000623056 BAALC-AS2P0C853 105 aa10.2□□□□□ -0.78
LDB3-209ENST00000623056 UTP20O75691 2785 aaKnown RBP10.2□□□□□ -0.78
LDB3-209ENST00000623056 NDUFA7O95182 113 aa10.19□□□□□ -0.78
LDB3-209ENST00000623056 SYNJ2BPP57105 145 aa10.19□□□□□ -0.78
LDB3-209ENST00000623056 C22orf24Q9Y442 160 aa10.19□□□□□ -0.78
LDB3-209ENST00000623056 USP9XQ93008 2570 aaPredicted RBP10.19□□□□□ -0.78
LDB3-209ENST00000623056 UQCRQO14949 82 aa10.19□□□□□ -0.78
LDB3-209ENST00000623056 LINC00694P0DN24 101 aa10.19□□□□□ -0.78
LDB3-209ENST00000623056 IGHV3OR16-12A0A075B7B8 117 aa10.18□□□□□ -0.78
LDB3-209ENST00000623056 DGAT2L7PQ6IED9 249 aa10.18□□□□□ -0.78
LDB3-209ENST00000623056 FAM218AQ96MZ4 157 aa10.18□□□□□ -0.78
LDB3-209ENST00000623056 PEMTQ9UBM1 199 aa10.18□□□□□ -0.78
LDB3-209ENST00000623056 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.18□□□□□ -0.78
LDB3-209ENST00000623056 LINC00242Q5T6M2 205 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 LINC00526Q96FQ7 95 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 MYO18BQ8IUG5 2567 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 ATP5G1P05496 136 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 CXCL5P42830 114 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 HERVK_113P63121 156 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 ZNF415Q09FC8 603 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 C5orf38Q86SI9 138 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 COPS9Q8WXC6 57 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
LDB3-209ENST00000623056 IGHV3-53P01767 116 aa10.16□□□□□ -0.78
LDB3-209ENST00000623056 CRYBG3Q68DQ2 2970 aa10.16□□□□□ -0.78
LDB3-209ENST00000623056 SMIM1B2RUZ4 78 aa10.16□□□□□ -0.78
LDB3-209ENST00000623056 PIK3CD-AS1Q5SR53 167 aa10.16□□□□□ -0.78
LDB3-209ENST00000623056 CSMD2Q7Z408 3487 aa10.15□□□□□ -0.78
LDB3-209ENST00000623056 RBMY1BA6NDE4 496 aaKnown RBP10.15□□□□□ -0.78
LDB3-209ENST00000623056 RBMY1EA6NEQ0 496 aaKnown RBP10.15□□□□□ -0.78
LDB3-209ENST00000623056 RBMY1DP0C7P1 496 aaKnown RBP10.15□□□□□ -0.78
LDB3-209ENST00000623056 FAM222AQ5U5X8 452 aa10.15□□□□□ -0.78
LDB3-209ENST00000623056 PRIMA1Q86XR5 153 aa10.15□□□□□ -0.78
LDB3-209ENST00000623056 PIMREGQ9BSJ6 248 aa10.15□□□□□ -0.78
LDB3-209ENST00000623056 DOPEY1Q5JWR5 2465 aa10.15□□□□□ -0.78
LDB3-209ENST00000623056 CREBBPQ92793 2442 aa10.15□□□□□ -0.78
LDB3-209ENST00000623056 ZNF462Q96JM2 2506 aa10.15□□□□□ -0.79
LDB3-209ENST00000623056 GAGE2AQ6NT46 116 aa10.15□□□□□ -0.79
LDB3-209ENST00000623056 INAFM2P0DMQ5 153 aa10.14□□□□□ -0.79
LDB3-209ENST00000623056 DEFB131AP59861 70 aa10.14□□□□□ -0.79
LDB3-209ENST00000623056 GCN1Q92616 2671 aaKnown RBP10.14□□□□□ -0.79
LDB3-209ENST00000623056 NRGNQ92686 78 aa10.13□□□□□ -0.79
LDB3-209ENST00000623056 KLK5Q9Y337 293 aaPredicted RBP10.13□□□□□ -0.79
LDB3-209ENST00000623056 Q9HAA7 133 aa10.13□□□□□ -0.79
LDB3-209ENST00000623056 COX7CP15954 63 aa10.12□□□□□ -0.79
LDB3-209ENST00000623056 HOXD3P31249 432 aaPredicted RBP10.12□□□□□ -0.79
LDB3-209ENST00000623056 C11orf72Q8NBR9 251 aa10.12□□□□□ -0.79
LDB3-209ENST00000623056 TRAV13-1A0A0B4J241 112 aa10.12□□□□□ -0.79
LDB3-209ENST00000623056 A8MTW9 85 aa10.12□□□□□ -0.79
LDB3-209ENST00000623056 MAP1AP78559 2803 aaPredicted RBP10.12□□□□□ -0.79
LDB3-209ENST00000623056 LOC107984640A0A0U1RRK4 108 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 TMEM89A2RUT3 159 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 AVPP01185 164 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 MALP21145 153 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 FAM19A3Q7Z5A8 133 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 C10orf105Q8TEF2 133 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 C2orf48Q96LS8 159 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 RS1O15537 224 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 IGHV4-59P01825 116 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 HIST1H4AP62805 103 aaKnown RBP10.11□□□□□ -0.79
LDB3-209ENST00000623056 HIST2H2BCQ6DN03 193 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 HIST2H2BDQ6DRA6 164 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 SPG11Q96JI7 2443 aa10.11□□□□□ -0.79
LDB3-209ENST00000623056 CSPG4Q6UVK1 2322 aa10.1□□□□□ -0.79
LDB3-209ENST00000623056 F5H768 121 aa10.1□□□□□ -0.79
LDB3-209ENST00000623056 MSMBP08118 114 aa10.1□□□□□ -0.79
LDB3-209ENST00000623056 ZNF843Q8N446 348 aa10.1□□□□□ -0.79
LDB3-209ENST00000623056 CELSR2Q9HCU4 2923 aa10.1□□□□□ -0.79
LDB3-209ENST00000623056 HELZ2Q9BYK8 2649 aaKnown RBP10.1□□□□□ -0.79
LDB3-209ENST00000623056 RPL28P46779 137 aaKnown RBP10.09□□□□□ -0.79
LDB3-209ENST00000623056 CSDC2Q9Y534 153 aaKnown RBP10.09□□□□□ -0.79
LDB3-209ENST00000623056 CCL19Q99731 98 aa10.08□□□□□ -0.8
LDB3-209ENST00000623056 IGHV4-30-2A0A087WSY4 118 aa10.08□□□□□ -0.8
LDB3-209ENST00000623056 CRYGAP11844 174 aa10.08□□□□□ -0.8
LDB3-209ENST00000623056 PLA2G2AP14555 144 aa10.08□□□□□ -0.8
LDB3-209ENST00000623056 LRRC75A-AS1Q8N1F1 130 aa10.08□□□□□ -0.8
LDB3-209ENST00000623056 TRAV13-2A0A0B4J235 113 aa10.07□□□□□ -0.8
LDB3-209ENST00000623056 ATOX1O00244 68 aa10.07□□□□□ -0.8
LDB3-209ENST00000623056 J3KT08 172 aa10.07□□□□□ -0.8
LDB3-209ENST00000623056 CRPP02741 224 aa10.07□□□□□ -0.8
LDB3-209ENST00000623056 PF4P02776 101 aa10.07□□□□□ -0.8
LDB3-209ENST00000623056 A0A1B0GX51 115 aa10.06□□□□□ -0.8
LDB3-209ENST00000623056 DEFB112Q30KQ8 113 aa10.06□□□□□ -0.8
LDB3-209ENST00000623056 C9orf129Q5T035 196 aaKnown RBP10.06□□□□□ -0.8
LDB3-209ENST00000623056 LINC00337Q8N6G1 96 aa10.06□□□□□ -0.8
LDB3-209ENST00000623056 LRRK2Q5S007 2527 aa10.06□□□□□ -0.8
LDB3-209ENST00000623056 DNAL4O96015 105 aa10.06□□□□□ -0.8
LDB3-209ENST00000623056 Q96MF0 132 aa10.06□□□□□ -0.8
LDB3-209ENST00000623056 A0A087WYN8 130 aa10.05□□□□□ -0.8
LDB3-209ENST00000623056 hADV29S1A0JD25 119 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms