RNA–Protein interactions for RNA: ENST00000622960.1

ATRX-208, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 5

Gene ATRX, Length 628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-208ENST00000622960 DPH3Q96FX2 82 aa8.46□□□□□ -1.06
ATRX-208ENST00000622960 V9GYV3 84 aa8.46□□□□□ -1.06
ATRX-208ENST00000622960 A0A1B0GW15 77 aa8.45□□□□□ -1.06
ATRX-208ENST00000622960 PPP1R2P9O14990 202 aa8.45□□□□□ -1.06
ATRX-208ENST00000622960 S100A8P05109 93 aa8.45□□□□□ -1.06
ATRX-208ENST00000622960 RPL23P62829 140 aaKnown RBP8.45□□□□□ -1.06
ATRX-208ENST00000622960 AMN1Q8IY45 258 aa8.45□□□□□ -1.06
ATRX-208ENST00000622960 NUP35Q8NFH5 326 aa8.45□□□□□ -1.06
ATRX-208ENST00000622960 CHCHD10Q8WYQ3 142 aaPredicted RBP8.45□□□□□ -1.06
ATRX-208ENST00000622960 ANAPC16Q96DE5 110 aa8.45□□□□□ -1.06
ATRX-208ENST00000622960 KIR2DL4Q99706 377 aa8.45□□□□□ -1.06
ATRX-208ENST00000622960 PKIGQ9Y2B9 76 aa8.45□□□□□ -1.06
ATRX-208ENST00000622960 RAB4AP20338 218 aa8.44□□□□□ -1.06
ATRX-208ENST00000622960 RPL37AP61513 92 aaKnown RBP8.44□□□□□ -1.06
ATRX-208ENST00000622960 TRBV27A0A0K0K1C4 114 aa8.43□□□□□ -1.06
ATRX-208ENST00000622960 VCYO14598 125 aa8.43□□□□□ -1.06
ATRX-208ENST00000622960 TSHBP01222 138 aa8.43□□□□□ -1.06
ATRX-208ENST00000622960 SS18Q15532 418 aa8.43□□□□□ -1.06
ATRX-208ENST00000622960 TMEM18Q96B42 140 aa8.43□□□□□ -1.06
ATRX-208ENST00000622960 TCAPO15273 167 aa8.42□□□□□ -1.06
ATRX-208ENST00000622960 S100PP25815 95 aa8.42□□□□□ -1.06
ATRX-208ENST00000622960 XCL1P47992 114 aa8.42□□□□□ -1.06
ATRX-208ENST00000622960 RNF185Q96GF1 192 aa8.42□□□□□ -1.06
ATRX-208ENST00000622960 DMBT1Q9UGM3 2413 aaPredicted RBP8.42□□□□□ -1.06
ATRX-208ENST00000622960 SRRM2Q9UQ35 2752 aaKnown RBP8.42□□□□□ -1.06
ATRX-208ENST00000622960 COLCA2A8K830 154 aa8.41□□□□□ -1.06
ATRX-208ENST00000622960 ESDP10768 282 aa8.41□□□□□ -1.06
ATRX-208ENST00000622960 RPS10P46783 165 aaKnown RBP8.41□□□□□ -1.06
ATRX-208ENST00000622960 CAMPP49913 170 aa8.41□□□□□ -1.06
ATRX-208ENST00000622960 SUMO2P61956 95 aaKnown RBP8.41□□□□□ -1.06
ATRX-208ENST00000622960 HIGD2BQ4VC39 106 aa8.41□□□□□ -1.06
ATRX-208ENST00000622960 SDIM1Q6ZPB5 146 aa8.41□□□□□ -1.06
ATRX-208ENST00000622960 MRPL52Q86TS9 123 aaKnown RBP8.41□□□□□ -1.06
ATRX-208ENST00000622960 CBLN2Q8IUK8 224 aa8.41□□□□□ -1.06
ATRX-208ENST00000622960 SMIM27A0A1W2PRY6 76 aa8.4□□□□□ -1.06
ATRX-208ENST00000622960 SMKR1H3BMG3 65 aa8.4□□□□□ -1.06
ATRX-208ENST00000622960 CCL25O15444 150 aa8.4□□□□□ -1.06
ATRX-208ENST00000622960 GAS8-AS1O95177 125 aa8.4□□□□□ -1.06
ATRX-208ENST00000622960 CKS2P33552 79 aa8.4□□□□□ -1.06
ATRX-208ENST00000622960 POLR2KP53803 58 aaKnown RBP8.4□□□□□ -1.06
ATRX-208ENST00000622960 ZNF664Q8N3J9 261 aa8.4□□□□□ -1.06
ATRX-208ENST00000622960 C15orf56Q8N910 161 aa8.4□□□□□ -1.06
ATRX-208ENST00000622960 TMA7Q9Y2S6 64 aaKnown RBP8.4□□□□□ -1.06
ATRX-208ENST00000622960 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.4□□□□□ -1.06
ATRX-208ENST00000622960 GVQW2A0A096LPI5 108 aaPredicted RBP8.39□□□□□ -1.07
ATRX-208ENST00000622960 IGHV1-58A0A0C4DH39 117 aa8.39□□□□□ -1.07
ATRX-208ENST00000622960 LINC00959A0A1B0GUT2 108 aa8.39□□□□□ -1.07
ATRX-208ENST00000622960 HBBP68871 147 aa8.39□□□□□ -1.07
ATRX-208ENST00000622960 FAM104BQ5XKR9 115 aa8.39□□□□□ -1.07
ATRX-208ENST00000622960 IMMP2LQ96T52 175 aa8.39□□□□□ -1.07
ATRX-208ENST00000622960 ZNF561-AS1K7EIQ3 104 aa8.38□□□□□ -1.07
ATRX-208ENST00000622960 MALP21145 153 aa8.38□□□□□ -1.07
ATRX-208ENST00000622960 FOXI1Q12951 378 aa8.38□□□□□ -1.07
ATRX-208ENST00000622960 MRPL51Q4U2R6 128 aaKnown RBP8.38□□□□□ -1.07
ATRX-208ENST00000622960 MRPL54Q6P161 138 aaKnown RBP8.38□□□□□ -1.07
ATRX-208ENST00000622960 C20orf78Q9BR46 151 aa8.38□□□□□ -1.07
ATRX-208ENST00000622960 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
ATRX-208ENST00000622960 VPS13BQ7Z7G8 4022 aa8.38□□□□□ -1.07
ATRX-208ENST00000622960 KRTAP29-1A8MX34 341 aaPredicted RBP8.37□□□□□ -1.07
ATRX-208ENST00000622960 C1orf196B1AJZ1 125 aa8.37□□□□□ -1.07
ATRX-208ENST00000622960 RAB5AP20339 215 aa8.37□□□□□ -1.07
ATRX-208ENST00000622960 CD164L2Q6UWJ8 174 aa8.37□□□□□ -1.07
ATRX-208ENST00000622960 NRACQ8N912 160 aa8.37□□□□□ -1.07
ATRX-208ENST00000622960 C7orf33Q8WU49 177 aa8.37□□□□□ -1.07
ATRX-208ENST00000622960 FLG2Q5D862 2391 aaPredicted RBP8.36□□□□□ -1.07
ATRX-208ENST00000622960 PPBPP02775 128 aa8.36□□□□□ -1.07
ATRX-208ENST00000622960 RAB5BP61020 215 aa8.36□□□□□ -1.07
ATRX-208ENST00000622960 CIRBPQ14011 172 aaKnown RBP8.36□□□□□ -1.07
ATRX-208ENST00000622960 SPACA4Q8TDM5 124 aa8.36□□□□□ -1.07
ATRX-208ENST00000622960 CARD19Q96LW7 228 aa8.36□□□□□ -1.07
ATRX-208ENST00000622960 LINC00474Q9P2X8 69 aa8.36□□□□□ -1.07
ATRX-208ENST00000622960 CSDC2Q9Y534 153 aaKnown RBP8.36□□□□□ -1.07
ATRX-208ENST00000622960 HERC1Q15751 4861 aa8.35□□□□□ -1.07
ATRX-208ENST00000622960 TRBV24-1A0A075B6N3 115 aa8.35□□□□□ -1.07
ATRX-208ENST00000622960 IGKV2-24A0A0C4DH68 120 aa8.35□□□□□ -1.07
ATRX-208ENST00000622960 OXTP01178 125 aa8.35□□□□□ -1.07
ATRX-208ENST00000622960 CHTF8P0CG12 524 aa8.35□□□□□ -1.07
ATRX-208ENST00000622960 COX6A2Q02221 97 aa8.35□□□□□ -1.07
ATRX-208ENST00000622960 MAJINQ3KP22 176 aa8.35□□□□□ -1.07
ATRX-208ENST00000622960 ATP5L2Q7Z4Y8 100 aa8.35□□□□□ -1.07
ATRX-208ENST00000622960 UBE2D4Q9Y2X8 147 aa8.35□□□□□ -1.07
ATRX-208ENST00000622960 TRAV9-1A0A075B6T8 112 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 A0A087WYN8 130 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 D6R8Y8 96 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 PANO1I0J062 215 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 COX7A2LO14548 114 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 TNFRSF6BO95407 300 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 APOMO95445 188 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 SLPIP03973 132 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 RPL32P62910 135 aaKnown RBP8.34□□□□□ -1.07
ATRX-208ENST00000622960 YPEL4Q96NS1 127 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 TIMM21Q9BVV7 248 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 SMIM2Q9BVW6 85 aa8.34□□□□□ -1.07
ATRX-208ENST00000622960 TRAV13-1A0A0B4J241 112 aa8.33□□□□□ -1.08
ATRX-208ENST00000622960 PHOX2AO14813 284 aa8.33□□□□□ -1.08
ATRX-208ENST00000622960 ORMDL3Q8N138 153 aa8.33□□□□□ -1.08
ATRX-208ENST00000622960 KRTAP10-4P60372 401 aaPredicted RBP8.32□□□□□ -1.08
ATRX-208ENST00000622960 SYCNQ0VAF6 134 aa8.32□□□□□ -1.08
ATRX-208ENST00000622960 COX19Q49B96 90 aa8.32□□□□□ -1.08
ATRX-208ENST00000622960 RNASE13Q5GAN3 156 aaKnown RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms