RNA–Protein interactions for RNA: ENST00000622044.1

PCDHGA11-203, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA11, Length 3,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-203ENST00000622044 TRBV6-5A0A0K0K1A5 114 aa8.39□□□□□ -1.07
PCDHGA11-203ENST00000622044 CFAP161Q6P656 301 aa8.39□□□□□ -1.07
PCDHGA11-203ENST00000622044 HRNRQ86YZ3 2850 aaPredicted RBP8.39□□□□□ -1.07
PCDHGA11-203ENST00000622044 TRGV2A0A075B6R0 118 aa8.39□□□□□ -1.07
PCDHGA11-203ENST00000622044 TRBV30A0A0K0K1B3 111 aa8.39□□□□□ -1.07
PCDHGA11-203ENST00000622044 NDUFA7O95182 113 aa8.39□□□□□ -1.07
PCDHGA11-203ENST00000622044 VSIG2Q96IQ7 327 aa8.39□□□□□ -1.07
PCDHGA11-203ENST00000622044 PFN2P35080 140 aa8.38□□□□□ -1.07
PCDHGA11-203ENST00000622044 C9orf85Q96MD7 179 aa8.38□□□□□ -1.07
PCDHGA11-203ENST00000622044 ANKRD17O75179 2603 aaKnown RBP8.38□□□□□ -1.07
PCDHGA11-203ENST00000622044 A6NDX4 124 aa8.38□□□□□ -1.07
PCDHGA11-203ENST00000622044 B4DSR2 109 aa8.38□□□□□ -1.07
PCDHGA11-203ENST00000622044 NXPH4O95158 308 aa8.38□□□□□ -1.07
PCDHGA11-203ENST00000622044 BAALC-AS2P0C853 105 aa8.38□□□□□ -1.07
PCDHGA11-203ENST00000622044 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
PCDHGA11-203ENST00000622044 H3BT86 120 aa8.37□□□□□ -1.07
PCDHGA11-203ENST00000622044 H3BUA1 57 aa8.37□□□□□ -1.07
PCDHGA11-203ENST00000622044 CRPP02741 224 aa8.37□□□□□ -1.07
PCDHGA11-203ENST00000622044 STHQ8IWL8 128 aa8.37□□□□□ -1.07
PCDHGA11-203ENST00000622044 K7EQG2 157 aa8.37□□□□□ -1.07
PCDHGA11-203ENST00000622044 PIK3CD-AS1Q5SR53 167 aa8.37□□□□□ -1.07
PCDHGA11-203ENST00000622044 TMEM61Q8N0U2 210 aa8.37□□□□□ -1.07
PCDHGA11-203ENST00000622044 RPL32P62910 135 aaKnown RBP8.36□□□□□ -1.07
PCDHGA11-203ENST00000622044 RPL36AP83881 106 aaKnown RBP8.36□□□□□ -1.07
PCDHGA11-203ENST00000622044 RPL36ALQ969Q0 106 aaKnown RBP8.36□□□□□ -1.07
PCDHGA11-203ENST00000622044 AMELXQ99217 191 aa8.36□□□□□ -1.07
PCDHGA11-203ENST00000622044 PAX4O43316 350 aa8.36□□□□□ -1.07
PCDHGA11-203ENST00000622044 K7EMT4 169 aa8.36□□□□□ -1.07
PCDHGA11-203ENST00000622044 EIF4EBP3O60516 100 aaPredicted RBP8.36□□□□□ -1.07
PCDHGA11-203ENST00000622044 ODF3Q96PU9 254 aa8.36□□□□□ -1.07
PCDHGA11-203ENST00000622044 SPANXA1Q9NS26 97 aa8.36□□□□□ -1.07
PCDHGA11-203ENST00000622044 AVPP01185 164 aa8.35□□□□□ -1.07
PCDHGA11-203ENST00000622044 MRPL23Q16540 153 aaKnown RBP8.35□□□□□ -1.07
PCDHGA11-203ENST00000622044 ZANQ9Y493 2812 aa8.35□□□□□ -1.07
PCDHGA11-203ENST00000622044 HIVEP2P31629 2446 aa8.35□□□□□ -1.07
PCDHGA11-203ENST00000622044 COPS9Q8WXC6 57 aa8.35□□□□□ -1.07
PCDHGA11-203ENST00000622044 INSP01308 110 aa8.35□□□□□ -1.07
PCDHGA11-203ENST00000622044 DAZ2Q13117 558 aaKnown RBP8.34□□□□□ -1.07
PCDHGA11-203ENST00000622044 Q6ZSN1 163 aa8.34□□□□□ -1.07
PCDHGA11-203ENST00000622044 DAZ4Q86SG3 579 aaKnown RBP8.34□□□□□ -1.07
PCDHGA11-203ENST00000622044 DAZ3Q9NR90 486 aaKnown RBP8.34□□□□□ -1.07
PCDHGA11-203ENST00000622044 HELZ2Q9BYK8 2649 aaKnown RBP8.34□□□□□ -1.07
PCDHGA11-203ENST00000622044 TINCRA0A1B0GVN0 87 aa8.34□□□□□ -1.07
PCDHGA11-203ENST00000622044 LST1O00453 97 aa8.34□□□□□ -1.07
PCDHGA11-203ENST00000622044 HIST1H4AP62805 103 aaKnown RBP8.34□□□□□ -1.07
PCDHGA11-203ENST00000622044 CITED1Q99966 193 aa8.34□□□□□ -1.07
PCDHGA11-203ENST00000622044 IGKV3D-7A0A0C4DH55 119 aa8.34□□□□□ -1.08
PCDHGA11-203ENST00000622044 C18orf65Q6ZTR6 163 aa8.34□□□□□ -1.08
PCDHGA11-203ENST00000622044 MRPS36P82909 103 aaKnown RBP8.33□□□□□ -1.08
PCDHGA11-203ENST00000622044 LINC00308Q8TCZ7 52 aa8.33□□□□□ -1.08
PCDHGA11-203ENST00000622044 C10orf105Q8TEF2 133 aa8.33□□□□□ -1.08
PCDHGA11-203ENST00000622044 FAM19A4Q96LR4 140 aa8.33□□□□□ -1.08
PCDHGA11-203ENST00000622044 HERVK_113P63121 156 aa8.33□□□□□ -1.08
PCDHGA11-203ENST00000622044 SBSPONQ8IVN8 264 aa8.33□□□□□ -1.08
PCDHGA11-203ENST00000622044 RPL35AP18077 110 aaKnown RBP8.33□□□□□ -1.08
PCDHGA11-203ENST00000622044 UBE2D4Q9Y2X8 147 aa8.33□□□□□ -1.08
PCDHGA11-203ENST00000622044 CELSR2Q9HCU4 2923 aa8.32□□□□□ -1.08
PCDHGA11-203ENST00000622044 NHLRC4P0CG21 123 aaPredicted RBP8.32□□□□□ -1.08
PCDHGA11-203ENST00000622044 PEMTQ9UBM1 199 aa8.32□□□□□ -1.08
PCDHGA11-203ENST00000622044 TRGV4A0A0C4DH28 118 aa8.32□□□□□ -1.08
PCDHGA11-203ENST00000622044 ATP5G1P05496 136 aa8.32□□□□□ -1.08
PCDHGA11-203ENST00000622044 IGLV1-40P01703 118 aa8.31□□□□□ -1.08
PCDHGA11-203ENST00000622044 RBMY1A1P0DJD3 496 aaKnown RBP8.31□□□□□ -1.08
PCDHGA11-203ENST00000622044 RBMY1CP0DJD4 496 aa8.31□□□□□ -1.08
PCDHGA11-203ENST00000622044 RBMY1FQ15415 496 aaKnown RBP8.31□□□□□ -1.08
PCDHGA11-203ENST00000622044 COX6A2Q02221 97 aa8.31□□□□□ -1.08
PCDHGA11-203ENST00000622044 HIST2H2BCQ6DN03 193 aa8.31□□□□□ -1.08
PCDHGA11-203ENST00000622044 CSMD2Q7Z408 3487 aa8.31□□□□□ -1.08
PCDHGA11-203ENST00000622044 PSMB8P28062 276 aa8.31□□□□□ -1.08
PCDHGA11-203ENST00000622044 CLPSL2Q6UWE3 100 aa8.31□□□□□ -1.08
PCDHGA11-203ENST00000622044 C5orf38Q86SI9 138 aa8.3□□□□□ -1.08
PCDHGA11-203ENST00000622044 NOP10Q9NPE3 64 aaKnown RBP8.3□□□□□ -1.08
PCDHGA11-203ENST00000622044 SPANXDQ9BXN6 97 aa8.3□□□□□ -1.08
PCDHGA11-203ENST00000622044 SPANXCQ9NY87 97 aa8.3□□□□□ -1.08
PCDHGA11-203ENST00000622044 COX7A2LO14548 114 aa8.29□□□□□ -1.08
PCDHGA11-203ENST00000622044 MIR7-3HGQ8N6C7 128 aa8.29□□□□□ -1.08
PCDHGA11-203ENST00000622044 C14orf132Q9NPU4 83 aa8.29□□□□□ -1.08
PCDHGA11-203ENST00000622044 PYGO1Q9Y3Y4 419 aa8.29□□□□□ -1.08
PCDHGA11-203ENST00000622044 SHISA2Q6UWI4 295 aa8.29□□□□□ -1.08
PCDHGA11-203ENST00000622044 SND1-IT1Q9HBX3 110 aa8.29□□□□□ -1.08
PCDHGA11-203ENST00000622044 SDIM1Q6ZPB5 146 aa8.29□□□□□ -1.08
PCDHGA11-203ENST00000622044 Q8N2B8 174 aa8.29□□□□□ -1.08
PCDHGA11-203ENST00000622044 PRORYQ9H606 182 aa8.29□□□□□ -1.08
PCDHGA11-203ENST00000622044 LINC00694P0DN24 101 aa8.28□□□□□ -1.08
PCDHGA11-203ENST00000622044 CHCHD7Q9BUK0 85 aa8.28□□□□□ -1.08
PCDHGA11-203ENST00000622044 INAFM2P0DMQ5 153 aa8.28□□□□□ -1.08
PCDHGA11-203ENST00000622044 C6orf226Q5I0X4 101 aa8.28□□□□□ -1.08
PCDHGA11-203ENST00000622044 Q6ZTI0 123 aa8.28□□□□□ -1.08
PCDHGA11-203ENST00000622044 A0A096LPF7 62 aa8.28□□□□□ -1.08
PCDHGA11-203ENST00000622044 DEFB130BP0DP73 79 aa8.28□□□□□ -1.08
PCDHGA11-203ENST00000622044 DEFB130AP0DP74 79 aa8.28□□□□□ -1.08
PCDHGA11-203ENST00000622044 BBC3Q96PG8 261 aaPredicted RBP8.27□□□□□ -1.09
PCDHGA11-203ENST00000622044 KLK5Q9Y337 293 aaPredicted RBP8.27□□□□□ -1.09
PCDHGA11-203ENST00000622044 NDUFA1O15239 70 aa8.27□□□□□ -1.09
PCDHGA11-203ENST00000622044 SLPIP03973 132 aa8.27□□□□□ -1.09
PCDHGA11-203ENST00000622044 TMEM243Q9BU79 118 aa8.27□□□□□ -1.09
PCDHGA11-203ENST00000622044 LECT2O14960 151 aa8.27□□□□□ -1.09
PCDHGA11-203ENST00000622044 LINC01356Q8N9X3 169 aa8.27□□□□□ -1.09
PCDHGA11-203ENST00000622044 LITAFQ99732 161 aa8.27□□□□□ -1.09
PCDHGA11-203ENST00000622044 VPREB3Q9UKI3 123 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms