RNA–Protein interactions for RNA: ENST00000622020.4

NPHP4-211, Transcript of nephrocystin 4, humanhuman

TSL 5 BASIC

Gene NPHP4, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-211ENST00000622020 UBE2D4Q9Y2X8 147 aa11.46□□□□□ -0.57
NPHP4-211ENST00000622020 TRBV10-2A0A0K0K1G8 114 aa11.46□□□□□ -0.58
NPHP4-211ENST00000622020 IGHV3-53P01767 116 aa11.46□□□□□ -0.58
NPHP4-211ENST00000622020 TRBV30A0A0K0K1B3 111 aa11.45□□□□□ -0.58
NPHP4-211ENST00000622020 HERV-K104P63124 156 aa11.45□□□□□ -0.58
NPHP4-211ENST00000622020 COX6A2Q02221 97 aa11.45□□□□□ -0.58
NPHP4-211ENST00000622020 TMEM61Q8N0U2 210 aa11.45□□□□□ -0.58
NPHP4-211ENST00000622020 C11orf44Q8N8P7 122 aa11.45□□□□□ -0.58
NPHP4-211ENST00000622020 GAGE12JA6NER3 117 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 GAGE7O76087 117 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 GAGE12FP0CL80 117 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 GAGE12GP0CL81 117 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 GAGE12IP0CL82 117 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 GAGE4Q13068 117 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 UBE2E2Q96LR5 201 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 XCL2Q9UBD3 114 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 COX6CP09669 75 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 MIAQ16674 131 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 IFITM1P13164 125 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 PYGO1Q9Y3Y4 419 aa11.44□□□□□ -0.58
NPHP4-211ENST00000622020 TRAV13-1A0A0B4J241 112 aa11.43□□□□□ -0.58
NPHP4-211ENST00000622020 Q9H8V8 135 aa11.42□□□□□ -0.58
NPHP4-211ENST00000622020 TMEM101Q96IK0 257 aa11.41□□□□□ -0.58
NPHP4-211ENST00000622020 TINCRA0A1B0GVN0 87 aa11.41□□□□□ -0.58
NPHP4-211ENST00000622020 LINC00694P0DN24 101 aa11.41□□□□□ -0.58
NPHP4-211ENST00000622020 ZNF462Q96JM2 2506 aa11.4□□□□□ -0.58
NPHP4-211ENST00000622020 ZNF415Q09FC8 603 aa11.4□□□□□ -0.58
NPHP4-211ENST00000622020 ZNF469Q96JG9 3925 aaPredicted RBP11.39□□□□□ -0.59
NPHP4-211ENST00000622020 SPANXDQ9BXN6 97 aa11.39□□□□□ -0.59
NPHP4-211ENST00000622020 SPANXCQ9NY87 97 aa11.39□□□□□ -0.59
NPHP4-211ENST00000622020 IGKV3OR2-268A0A0C4DH90 116 aa11.38□□□□□ -0.59
NPHP4-211ENST00000622020 ZNF702PQ9H963 129 aa11.38□□□□□ -0.59
NPHP4-211ENST00000622020 TRGV1A0A0A0MS02 117 aa11.38□□□□□ -0.59
NPHP4-211ENST00000622020 Q8N2B8 174 aa11.38□□□□□ -0.59
NPHP4-211ENST00000622020 DYNLRB2Q8TF09 96 aa11.38□□□□□ -0.59
NPHP4-211ENST00000622020 CITED2Q99967 270 aaPredicted RBP11.38□□□□□ -0.59
NPHP4-211ENST00000622020 VPREB3Q9UKI3 123 aa11.38□□□□□ -0.59
NPHP4-211ENST00000622020 FN1P02751 2386 aaKnown RBP11.38□□□□□ -0.59
NPHP4-211ENST00000622020 SPANXA1Q9NS26 97 aa11.38□□□□□ -0.59
NPHP4-211ENST00000622020 MEIG1Q5JSS6 88 aa11.37□□□□□ -0.59
NPHP4-211ENST00000622020 LINC01356Q8N9X3 169 aa11.37□□□□□ -0.59
NPHP4-211ENST00000622020 A0A1W2PRX2 142 aa11.37□□□□□ -0.59
NPHP4-211ENST00000622020 LST1O00453 97 aa11.36□□□□□ -0.59
NPHP4-211ENST00000622020 MAP6D1Q9H9H5 199 aa11.36□□□□□ -0.59
NPHP4-211ENST00000622020 TMEM89A2RUT3 159 aa11.35□□□□□ -0.59
NPHP4-211ENST00000622020 CHCHD5Q9BSY4 110 aa11.35□□□□□ -0.59
NPHP4-211ENST00000622020 C11orf72Q8NBR9 251 aa11.35□□□□□ -0.59
NPHP4-211ENST00000622020 LINC00308Q8TCZ7 52 aa11.35□□□□□ -0.59
NPHP4-211ENST00000622020 PRORYQ9H606 182 aa11.35□□□□□ -0.59
NPHP4-211ENST00000622020 CIRBPQ14011 172 aaKnown RBP11.35□□□□□ -0.59
NPHP4-211ENST00000622020 PIK3CD-AS1Q5SR53 167 aa11.35□□□□□ -0.59
NPHP4-211ENST00000622020 LINC00242Q5T6M2 205 aa11.35□□□□□ -0.59
NPHP4-211ENST00000622020 CFAP161Q6P656 301 aa11.35□□□□□ -0.59
NPHP4-211ENST00000622020 SOSTDC1Q6X4U4 206 aa11.34□□□□□ -0.59
NPHP4-211ENST00000622020 PRIMA1Q86XR5 153 aa11.34□□□□□ -0.59
NPHP4-211ENST00000622020 YAE1D1Q9NRH1 226 aa11.34□□□□□ -0.59
NPHP4-211ENST00000622020 MTORP42345 2549 aa11.33□□□□□ -0.6
NPHP4-211ENST00000622020 NBPF19A0A087WUL8 3843 aa11.33□□□□□ -0.6
NPHP4-211ENST00000622020 M0QXV9 152 aa11.33□□□□□ -0.6
NPHP4-211ENST00000622020 FAM110AQ9BQ89 295 aa11.32□□□□□ -0.6
NPHP4-211ENST00000622020 SETXQ7Z333 2677 aaKnown RBP11.32□□□□□ -0.6
NPHP4-211ENST00000622020 NDUFA1O15239 70 aa11.32□□□□□ -0.6
NPHP4-211ENST00000622020 Q6ZTI0 123 aa11.32□□□□□ -0.6
NPHP4-211ENST00000622020 H3BT86 120 aa11.31□□□□□ -0.6
NPHP4-211ENST00000622020 INSP01308 110 aa11.31□□□□□ -0.6
NPHP4-211ENST00000622020 TOMM7Q9P0U1 55 aa11.31□□□□□ -0.6
NPHP4-211ENST00000622020 ACANP16112 2415 aa11.3□□□□□ -0.6
NPHP4-211ENST00000622020 PLA2G2AP14555 144 aa11.3□□□□□ -0.6
NPHP4-211ENST00000622020 Q6YL49 198 aa11.3□□□□□ -0.6
NPHP4-211ENST00000622020 NTM-AS1Q6ZSK4 140 aa11.3□□□□□ -0.6
NPHP4-211ENST00000622020 Q9HAA7 133 aa11.3□□□□□ -0.6
NPHP4-211ENST00000622020 NBEAL2Q6ZNJ1 2754 aa11.29□□□□□ -0.6
NPHP4-211ENST00000622020 SMIM1B2RUZ4 78 aa11.29□□□□□ -0.6
NPHP4-211ENST00000622020 Q6Q795 121 aa11.28□□□□□ -0.6
NPHP4-211ENST00000622020 STHQ8IWL8 128 aa11.28□□□□□ -0.6
NPHP4-211ENST00000622020 EDA2RQ9HAV5 297 aa11.28□□□□□ -0.6
NPHP4-211ENST00000622020 PEMTQ9UBM1 199 aa11.28□□□□□ -0.6
NPHP4-211ENST00000622020 LOC100131303A0A0U1RQF7 123 aa11.28□□□□□ -0.6
NPHP4-211ENST00000622020 PRB1P04280 392 aa11.28□□□□□ -0.6
NPHP4-211ENST00000622020 DEFB114Q30KQ6 69 aa11.28□□□□□ -0.6
NPHP4-211ENST00000622020 RS1O15537 224 aa11.27□□□□□ -0.6
NPHP4-211ENST00000622020 TIRAPP58753 221 aa11.27□□□□□ -0.6
NPHP4-211ENST00000622020 HERVK_113P63121 156 aa11.27□□□□□ -0.6
NPHP4-211ENST00000622020 C1orf158Q8N1D5 194 aa11.27□□□□□ -0.61
NPHP4-211ENST00000622020 FAM218AQ96MZ4 157 aa11.27□□□□□ -0.61
NPHP4-211ENST00000622020 NOP10Q9NPE3 64 aaKnown RBP11.27□□□□□ -0.61
NPHP4-211ENST00000622020 KRTAP10-9P60411 292 aa11.27□□□□□ -0.61
NPHP4-211ENST00000622020 ODF3L2Q3SX64 289 aa11.27□□□□□ -0.61
NPHP4-211ENST00000622020 DAZ2Q13117 558 aaKnown RBP11.26□□□□□ -0.61
NPHP4-211ENST00000622020 DAZ4Q86SG3 579 aaKnown RBP11.26□□□□□ -0.61
NPHP4-211ENST00000622020 RNF152Q8N8N0 203 aa11.26□□□□□ -0.61
NPHP4-211ENST00000622020 Q96MF0 132 aa11.26□□□□□ -0.61
NPHP4-211ENST00000622020 WFDC10AQ9H1F0 79 aa11.26□□□□□ -0.61
NPHP4-211ENST00000622020 DAZ3Q9NR90 486 aaKnown RBP11.26□□□□□ -0.61
NPHP4-211ENST00000622020 RPL36AP83881 106 aaKnown RBP11.26□□□□□ -0.61
NPHP4-211ENST00000622020 RPL36ALQ969Q0 106 aaKnown RBP11.26□□□□□ -0.61
NPHP4-211ENST00000622020 DNAJC30Q96LL9 226 aa11.25□□□□□ -0.61
NPHP4-211ENST00000622020 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
NPHP4-211ENST00000622020 COX7A2LO14548 114 aa11.25□□□□□ -0.61
NPHP4-211ENST00000622020 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms